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All papers authored by Adair Borges

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2022 Samantha L. Peters, Adair L. Borges

ORCID

, Richard J. Giannone, Michael J. Morowitz, Jillian F. Banfield, Robert L. Hettich

Validation that human microbiome phages use alternative genetic coding with TAG stop read as Q

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2021 Benjamin E. Rubin

ORCID

, Spencer Diamond

ORCID

, Brady F. Cress

ORCID

, Alexander Crits-Christoph, Yue Clare Lou, Adair L. Borges

ORCID

, Haridha Shivram, Christine He

ORCID

ORCID

ORCID

, Sara J. Smith, Rachel Rovinsky, Dylan C. J. Smock, Kimberly Tang

ORCID

, Trenton K. Owens and 6 other authors

Species- and site-specific genome editing in complex bacterial communities

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Lin-Xing Chen, Alexander L. Jaffe, Adair L. Borges

ORCID

, Petar I. Penev, Tara Colenbrander Nelson, Lesley A. Warren, Jillian F. Banfield

Phage-encoded ribosomal protein S21 expression is linked to late stage phage replication

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Adair L. Borges

ORCID

, Yue Clare Lou, Rohan Sachdeva, Basem Al-Shayeb, Alexander L. Jaffe, Shufei Lei, Joanne M. Santini, Jillian F. Banfield

Stop codon recoding is widespread in diverse phage lineages and has the potential to regulate translation of late stage and lytic genes

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Adair L. Borges

ORCID

How to train your bacteriophage

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Lina M. León

ORCID

, Allyson E. Park, Adair L. Borges

ORCID

, Jenny Y. Zhang, Joseph Bondy-Denomy

Mobile element warfare via CRISPR and anti-CRISPR in Pseudomonas aeruginosa

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Marco A. Crisci, Lin-Xing Chen, Audra E. Devoto, Adair L. Borges

ORCID

, Nicola Bordin, Rohan Sachdeva, Adrian Tett, Allison M. Sharrar, Nicola Segata, Francesco Debenedetti, Mick Bailey, Rachel Burt, Rhiannon M. Wood, Lewis J. Rowden, Paula M. Corsini and 4 other authors

Wide distribution of alternatively coded Lak megaphages in animal microbiomes

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2020 Ayal B. Gussow

ORCID

, Allyson E. Park, Adair L. Borges

ORCID

, Sergey A. Shmakov, Kira S. Makarova

ORCID

ORCID

, Joseph Bondy-Denomy, Eugene V. Koonin

ORCID

Machine-learning approach expands the repertoire of anti-CRISPR protein families

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Adair L. Borges

ORCID

, Bardo Castro, Sutharsan Govindarajan, Tina Solvik, Veronica Escalante, Joseph Bondy-Denomy

ORCID

Bacterial alginate regulators and phage homologs repress CRISPR–Cas immunity

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2019 Valerie M. Crowley, Adam Catching, Hannah N. Taylor, Adair L. Borges

ORCID

, Josie Metcalf, Joseph Bondy-Denomy, Ryan N. Jackson

A Type IV-A CRISPR-Cas System in Pseudomonas aeruginosa Mediates RNA-Guided Plasmid Interference In Vivo

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Sabrina Y. Stanley, Adair L. Borges

ORCID

, Kuei-Ho Chen, Danielle L. Swaney, Nevan J. Krogan, Joseph Bondy-Denomy, Alan R. Davidson

Anti-CRISPR-Associated Proteins Are Crucial Repressors of Anti-CRISPR Transcription

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Simon Roux

ORCID

, Mart Krupovic

ORCID

, Rebecca A. Daly, Adair L. Borges

ORCID

, Stephen Nayfach, Frederik Schulz

ORCID

, Allison Sharrar, Paula B. Matheus Carnevali

ORCID

, Jan-Fang Cheng, Natalia N. Ivanova

ORCID

, Joseph Bondy-Denomy, Kelly C. Wrighton, Tanja Woyke

ORCID

ORCID

, Nikos C. Kyrpides and 1 other authors

Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Adair L. Borges

ORCID

, Bardo Castro, Sutharsan Govindarajan, Tina Solvik, Veronica Escalante, Joseph Bondy-Denomy

CRISPR-Cas immunity repressed by a biofilm-activating pathway in Pseudomonas aeruginosa

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2018 Adair L. Borges

ORCID

, Jenny Y. Zhang, MaryClare F. Rollins, Beatriz A. Osuna

ORCID

, Blake Wiedenheft

ORCID

, Joseph Bondy-Denomy

ORCID

Bacteriophage cooperation suppresses CRISPR-Cas3 and Cas9 immunity

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2017 Adair L. Borges

ORCID

, Alan R. Davidson, Joseph Bondy-Denomy

The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs

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2014 Walzer Ka, Katelyn A. Walzer, Gregory M. Wier, Ananth R. Srinivasan, Wier Gm, Rachel A. Dam, Dam Ra, Srinivasan Ar, Borges Al, Adair L. Borges

ORCID

, English Ed, Elizabeth D. English, Herrmann Dc, Daland C. Herrmann, Gereon Schares

ORCID

and 4 other authors

Hammondia hammondi Harbors Functional Orthologs of the Host-Modulating Effectors GRA15 and ROP16 but Is Distinguished from Toxoplasma gondii by a Unique Transcriptional Profile

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Yaw Adomako-Ankomah, Gregory M. Wier, Adair L. Borges

ORCID

, Hannah E. Wand, Jon P. Boyle

Differential Locus Expansion Distinguishes Toxoplasmatinae Species and Closely Related Strains of Toxoplasma gondii

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