All papers authored by Mitchell Vollger
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2023
Arang Rhie 
,
Sergey Nurk,
Monika Cechova,
Savannah J. Hoyt ,
Dylan J. Taylor ,
Nicolas Altemose ,
Paul W. Hook ,
Sergey Koren ,
Mikko Rautiainen,
Ivan A. Alexandrov,
Jamie Allen ,
Mobin Asri,
Andrey V. Bzikadze ,
Nae-Chyun Chen,
Chen-Shan Chin
and 72 other authors
,
Sergey Nurk,
Monika Cechova,
Savannah J. Hoyt ,
Dylan J. Taylor ,
Nicolas Altemose ,
Paul W. Hook ,
Sergey Koren ,
Mikko Rautiainen,
Ivan A. Alexandrov,
Jamie Allen ,
Mobin Asri,
Andrey V. Bzikadze ,
Nae-Chyun Chen,
Chen-Shan Chin
and 72 other authors
The complete sequence of a human Y chromosome
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2022
Nicolas Altemose ,
Pragya Sidhwani ,
Lev Uralsky ,
Fedor D. Ryabov ,
Colin J. Shew,
Michael E. G. Sauria ,
Valery A. Shepelev,
Mitchell R. Vollger ,
Arang Rhie ,
Glennis A. Logsdon ,
Kishwar Shafin ,
Andrey V. Bzikadze ,
Daniel Olson ,
Sasha A. Langley,
Leonardo Gomes de Lima
and 46 other authors
,
Pragya Sidhwani ,
Lev Uralsky ,
Fedor D. Ryabov ,
Colin J. Shew,
Michael E. G. Sauria ,
Valery A. Shepelev,
Mitchell R. Vollger ,
Arang Rhie ,
Glennis A. Logsdon ,
Kishwar Shafin ,
Andrey V. Bzikadze ,
Daniel Olson ,
Sasha A. Langley,
Leonardo Gomes de Lima
and 46 other authors
Complete genomic and epigenetic maps of human centromeres
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Savannah J. Hoyt ,
Jessica M. Storer ,
Gabrielle A. Hartley,
Patrick G. S. Grady ,
Ariel Gershman ,
Leonardo G. de Lima ,
Charles Limouse,
Reza Halabian ,
Luke Wojenski ,
Matias Rodriguez ,
Nicolas Altemose ,
Arang Rhie ,
Leighton J. Core ,
Jennifer L. Gerton ,
Wojciech Makalowski
and 12 other authors
,
Jessica M. Storer ,
Gabrielle A. Hartley,
Patrick G. S. Grady ,
Ariel Gershman ,
Leonardo G. de Lima ,
Charles Limouse,
Reza Halabian ,
Luke Wojenski ,
Matias Rodriguez ,
Nicolas Altemose ,
Arang Rhie ,
Leighton J. Core ,
Jennifer L. Gerton ,
Wojciech Makalowski
and 12 other authors
From telomere to telomere: The transcriptional and epigenetic state of human repeat elements
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Mitchell R. Vollger ,
Xavi Guitart ,
Philip C. Dishuck ,
Ludovica Mercuri ,
William T. Harvey ,
Ariel Gershman ,
Mark Diekhans ,
Arvis Sulovari ,
Katherine M. Munson ,
Alexandra P. Lewis,
Alexandra M. Lewis,
Kendra Hoekzema ,
David Porubsky ,
Ruiyang Li ,
Sergey Nurk
and 6 other authors
,
Xavi Guitart ,
Philip C. Dishuck ,
Ludovica Mercuri ,
William T. Harvey ,
Ariel Gershman ,
Mark Diekhans ,
Arvis Sulovari ,
Katherine M. Munson ,
Alexandra P. Lewis,
Alexandra M. Lewis,
Kendra Hoekzema ,
David Porubsky ,
Ruiyang Li ,
Sergey Nurk
and 6 other authors
Segmental duplications and their variation in a complete human genome
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Sergey Aganezov ,
Stephanie M. Yan ,
Daniela C. Soto ,
Melanie Kirsche ,
Samantha Zarate ,
Pavel Avdeyev ,
Dylan J. Taylor ,
Kishwar Shafin ,
Alaina Shumate ,
Chunlin Xiao ,
Justin Wagner,
Jennifer McDaniel ,
Nathan D. Olson ,
Michael E. G. Sauria ,
Mitchell R. Vollger
and 18 other authors
,
Stephanie M. Yan ,
Daniela C. Soto ,
Melanie Kirsche ,
Samantha Zarate ,
Pavel Avdeyev ,
Dylan J. Taylor ,
Kishwar Shafin ,
Alaina Shumate ,
Chunlin Xiao ,
Justin Wagner,
Jennifer McDaniel ,
Nathan D. Olson ,
Michael E. G. Sauria ,
Mitchell R. Vollger
and 18 other authors
A complete reference genome improves analysis of human genetic variation
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Ariel Gershman ,
Michael E. G. Sauria ,
Xavi Guitart ,
Mitchell R. Vollger ,
Paul W. Hook ,
Savannah J. Hoyt ,
Miten Jain ,
Alaina Shumate ,
Roham Razaghi ,
Sergey Koren ,
Nicolas Altemose ,
Gina V. Caldas,
Glennis A. Logsdon ,
Arang Rhie ,
Evan E. Eichler
and 5 other authors
,
Michael E. G. Sauria ,
Xavi Guitart ,
Mitchell R. Vollger ,
Paul W. Hook ,
Savannah J. Hoyt ,
Miten Jain ,
Alaina Shumate ,
Roham Razaghi ,
Sergey Koren ,
Nicolas Altemose ,
Gina V. Caldas,
Glennis A. Logsdon ,
Arang Rhie ,
Evan E. Eichler
and 5 other authors
Epigenetic patterns in a complete human genome
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Sergey Nurk ,
Sergey Koren ,
Arang Rhie ,
Mikko Rautiainen ,
Andrey V. Bzikadze ,
Alla Mikheenko,
Mitchell R. Vollger ,
Nicolas Altemose ,
Lev Uralsky ,
Ariel Gershman ,
Sergey Aganezov ,
Savannah J. Hoyt ,
Mark Diekhans ,
Glennis A. Logsdon ,
Michael Alonge
and 85 other authors
,
Sergey Koren ,
Arang Rhie ,
Mikko Rautiainen ,
Andrey V. Bzikadze ,
Alla Mikheenko,
Mitchell R. Vollger ,
Nicolas Altemose ,
Lev Uralsky ,
Ariel Gershman ,
Sergey Aganezov ,
Savannah J. Hoyt ,
Mark Diekhans ,
Glennis A. Logsdon ,
Michael Alonge
and 85 other authors
The complete sequence of a human genome
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2021
Glennis A. Logsdon ,
Mitchell R. Vollger ,
PingHsun Hsieh,
Yafei Mao ,
Mikhail A. Liskovykh,
Sergey Koren ,
Sergey Nurk,
Ludovica Mercuri ,
Philip C. Dishuck ,
Arang Rhie ,
Leonardo G. de Lima ,
Tatiana Dvorkina,
David Porubsky ,
William T. Harvey,
Alla Mikheenko
and 17 other authors
,
Mitchell R. Vollger ,
PingHsun Hsieh,
Yafei Mao ,
Mikhail A. Liskovykh,
Sergey Koren ,
Sergey Nurk,
Ludovica Mercuri ,
Philip C. Dishuck ,
Arang Rhie ,
Leonardo G. de Lima ,
Tatiana Dvorkina,
David Porubsky ,
William T. Harvey,
Alla Mikheenko
and 17 other authors
The structure, function and evolution of a complete human chromosome 8
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2020
Wesley C. Warren ,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility
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Sergey Nurk ,
Brian P. Walenz ,
Arang Rhie ,
Mitchell R. Vollger ,
Glennis A. Logsdon ,
Robert Grothe,
Karen H. Miga ,
Evan E. Eichler ,
Adam M. Phillippy ,
Sergey Koren
Download from doi.org
,
Brian P. Walenz ,
Arang Rhie ,
Mitchell R. Vollger ,
Glennis A. Logsdon ,
Robert Grothe,
Karen H. Miga ,
Evan E. Eichler ,
Adam M. Phillippy ,
Sergey Koren
Download from doi.org
Kishwar Shafin ,
Trevor Pesout,
Ryan Lorig-Roach,
Marina Haukness,
Hugh E. Olsen,
Colleen Bosworth,
Joel Armstrong,
Kristof Tigyi,
Nicholas Maurer ,
Sergey Koren ,
Fritz J. Sedlazeck ,
Tobias Marschall ,
Simon Mayes,
Vania Costa,
Justin M. Zook
and 17 other authors
,
Trevor Pesout,
Ryan Lorig-Roach,
Marina Haukness,
Hugh E. Olsen,
Colleen Bosworth,
Joel Armstrong,
Kristof Tigyi,
Nicholas Maurer ,
Sergey Koren ,
Fritz J. Sedlazeck ,
Tobias Marschall ,
Simon Mayes,
Vania Costa,
Justin M. Zook
and 17 other authors
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
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2019
PingHsun Hsieh ,
Mitchell R. Vollger ,
Vy Dang ,
David Porubsky,
Carl Baker,
Stuart Cantsilieris,
Kendra Hoekzema,
Alexandra P. Lewis ,
Katherine M. Munson ,
Melanie Sorensen ,
Zev N. Kronenberg,
Shwetha Murali,
Bradley J. Nelson,
Giorgia Chiatante,
Flavia Angela Maria Maggiolini
and 5 other authors
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,
Mitchell R. Vollger ,
Vy Dang ,
David Porubsky,
Carl Baker,
Stuart Cantsilieris,
Kendra Hoekzema,
Alexandra P. Lewis ,
Katherine M. Munson ,
Melanie Sorensen ,
Zev N. Kronenberg,
Shwetha Murali,
Bradley J. Nelson,
Giorgia Chiatante,
Flavia Angela Maria Maggiolini
and 5 other authors
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Karen H. Miga ,
Sergey Koren ,
Arang Rhie ,
Mitchell R. Vollger ,
Ariel Gershman,
Andrey Bzikadze,
Shelise Brooks,
Edmund Howe,
David Porubsky,
Glennis A. Logsdon ,
Valerie A. Schneider,
Tamara Potapova,
Jonathan Wood,
William Chow ,
Joel Armstrong
and 39 other authors
,
Sergey Koren ,
Arang Rhie ,
Mitchell R. Vollger ,
Ariel Gershman,
Andrey Bzikadze,
Shelise Brooks,
Edmund Howe,
David Porubsky,
Glennis A. Logsdon ,
Valerie A. Schneider,
Tamara Potapova,
Jonathan Wood,
William Chow ,
Joel Armstrong
and 39 other authors
Telomere-to-telomere assembly of a complete human X chromosome
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Mitchell R. Vollger ,
Glennis A. Logsdon ,
Peter A. Audano ,
Arvis Sulovari ,
David Porubsky,
Paul Peluso,
Aaron M. Wenger ,
Gregory T. Concepcion,
Zev N. Kronenberg ,
Katherine M. Munson ,
Carl Baker,
Ashley D. Sanders ,
Diana C. J. Spierings ,
Peter M. Lansdorp ,
Urvashi Surti
and 2 other authors
Download from onlinelibrary.wiley.com
,
Glennis A. Logsdon ,
Peter A. Audano ,
Arvis Sulovari ,
David Porubsky,
Paul Peluso,
Aaron M. Wenger ,
Gregory T. Concepcion,
Zev N. Kronenberg ,
Katherine M. Munson ,
Carl Baker,
Ashley D. Sanders ,
Diana C. J. Spierings ,
Peter M. Lansdorp ,
Urvashi Surti
and 2 other authors
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Flavia A. M. Maggiolini ,
Stuart Cantsilieris,
Pietro D’Addabbo ,
Michele Manganelli ,
Bradley P. Coe,
Beth L. Dumont ,
Ashley D. Sanders ,
Andy Wing Chun Pang,
Mitchell R. Vollger ,
Orazio Palumbo ,
Pietro Palumbo ,
Maria Accadia ,
Massimo Carella ,
Evan E. Eichler ,
Francesca Antonacci
,
Stuart Cantsilieris,
Pietro D’Addabbo ,
Michele Manganelli ,
Bradley P. Coe,
Beth L. Dumont ,
Ashley D. Sanders ,
Andy Wing Chun Pang,
Mitchell R. Vollger ,
Orazio Palumbo ,
Pietro Palumbo ,
Maria Accadia ,
Massimo Carella ,
Evan E. Eichler ,
Francesca Antonacci
Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus
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