All papers authored by Fiona Cunningham
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2022
Adam Frankish 
,
Sílvia Carbonell-Sala,
Mark Diekhans ,
Irwin Jungreis ,
Jane E. Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James C. Wright,
Carme Arnan ,
If Barnes,
Abhimanyu Banerjee,
Ruth Bennett,
Andrew Berry,
Alexandra Bignell,
Carles Boix
and 47 other authors
,
Sílvia Carbonell-Sala,
Mark Diekhans ,
Irwin Jungreis ,
Jane E. Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James C. Wright,
Carme Arnan ,
If Barnes,
Abhimanyu Banerjee,
Ruth Bennett,
Andrew Berry,
Alexandra Bignell,
Carles Boix
and 47 other authors
GENCODE: reference annotation for the human and mouse genomes in 2023
Download from academic.oup.com
Elliot Sollis ,
Abayomi Mosaku ,
Ala Abid ,
Annalisa Buniello ,
Maria Cerezo ,
Laurent Gil ,
Tudor Groza ,
Osman Güneş ,
Peggy Hall,
James Hayhurst ,
Arwa Ibrahim ,
Yue Ji ,
Sajo John ,
Elizabeth Lewis ,
Jacqueline A. L. MacArthur
and 15 other authors
,
Abayomi Mosaku ,
Ala Abid ,
Annalisa Buniello ,
Maria Cerezo ,
Laurent Gil ,
Tudor Groza ,
Osman Güneş ,
Peggy Hall,
James Hayhurst ,
Arwa Ibrahim ,
Yue Ji ,
Sajo John ,
Elizabeth Lewis ,
Jacqueline A. L. MacArthur
and 15 other authors
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource
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Fergal J. Martin ,
M. Ridwan Amode,
Alisha Aneja,
Olanrewaju Austine-Orimoloye,
Andrey G. Azov,
If Barnes,
Arne Becker,
Ruth Bennett,
Andrew Berry,
Jyothish Bhai,
Simarpreet Kaur Bhurji,
Alexandra Bignell,
Sanjay Boddu,
Paulo R. Branco Lins,
Lucy Brooks
and 81 other authors
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,
M. Ridwan Amode,
Alisha Aneja,
Olanrewaju Austine-Orimoloye,
Andrey G. Azov,
If Barnes,
Arne Becker,
Ruth Bennett,
Andrew Berry,
Jyothish Bhai,
Simarpreet Kaur Bhurji,
Alexandra Bignell,
Sanjay Boddu,
Paulo R. Branco Lins,
Lucy Brooks
and 81 other authors
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Joannella Morales,
Shashikant Pujar,
Jane E. Loveland,
Alex Astashyn,
Ruth Bennett,
Andrew Berry,
Eric Cox ,
Claire Davidson,
Olga Ermolaeva,
Catherine M. Farrell,
Reham Fatima,
Laurent Gil,
Tamara Goldfarb,
Jose M. Gonzalez ,
Diana Haddad
and 25 other authors
,
Claire Davidson,
Olga Ermolaeva,
Catherine M. Farrell,
Reham Fatima,
Laurent Gil,
Tamara Goldfarb,
Jose M. Gonzalez ,
Diana Haddad
and 25 other authors
A joint NCBI and EMBL-EBI transcript set for clinical genomics and research
Download from www.nature.com
2021
Sarah E. Hunt ,
Benjamin Moore ,
Ridwan M. Amode,
Irina M. Armean,
Diana Lemos,
Aleena Mushtaq,
Andrew Parton,
Helen Schuilenburg ,
Michał Szpak,
Anja Thormann,
Emily Perry,
Stephen J. Trevanion,
Paul Flicek,
Andrew D. Yates,
Fiona Cunningham
,
Benjamin Moore ,
Ridwan M. Amode,
Irina M. Armean,
Diana Lemos,
Aleena Mushtaq,
Andrew Parton,
Helen Schuilenburg ,
Michał Szpak,
Anja Thormann,
Emily Perry,
Stephen J. Trevanion,
Paul Flicek,
Andrew D. Yates,
Fiona Cunningham
Annotating and prioritizing genomic variants using the Ensembl Variant Effect Predictor—A tutorial
Download from onlinelibrary.wiley.com
Fiona Cunningham ,
James E. Allen,
Jamie Allen ,
Jorge Alvarez-Jarreta,
M. Ridwan Amode,
Irina M. Armean ,
Olanrewaju Austine-Orimoloye,
Andrey G. Azov,
If Barnes,
Ruth Bennett,
Andrew Berry,
Jyothish Bhai,
Alexandra Bignell,
Konstantinos Billis ,
Sanjay Boddu
and 80 other authors
Download from doi.org
,
James E. Allen,
Jamie Allen ,
Jorge Alvarez-Jarreta,
M. Ridwan Amode,
Irina M. Armean ,
Olanrewaju Austine-Orimoloye,
Andrey G. Azov,
If Barnes,
Ruth Bennett,
Andrew Berry,
Jyothish Bhai,
Alexandra Bignell,
Konstantinos Billis ,
Sanjay Boddu
and 80 other authors
Download from doi.org
Heidi L. Rehm ,
Angela J. H. Page ,
Lindsay Smith ,
Jeremy B. Adams ,
Gil Alterovitz,
Lawrence J. Babb ,
Maxmillian P. Barkley,
Michael Baudis ,
Michael J. S. Beauvais ,
Tim Beck ,
Jacques S. Beckmann ,
Sergi Beltran ,
David Bernick,
Alexander Bernier,
James K. Bonfield
and 187 other authors
,
Angela J. H. Page ,
Lindsay Smith ,
Jeremy B. Adams ,
Gil Alterovitz,
Lawrence J. Babb ,
Maxmillian P. Barkley,
Michael Baudis ,
Michael J. S. Beauvais ,
Tim Beck ,
Jacques S. Beckmann ,
Sergi Beltran ,
David Bernick,
Alexander Bernier,
James K. Bonfield
and 187 other authors
GA4GH: International policies and standards for data sharing across genomic research and healthcare
Download from doi.org
Timothe Cezard ,
Fiona Cunningham ,
Sarah E. Hunt ,
Baron Koylass,
Nitin Kumar,
Gary Saunders ,
April Shen,
Andres F. Silva,
Kirill Tsukanov ,
Sundararaman Venkataraman,
Paul Flicek ,
Helen Parkinson,
Thomas M. Keane
,
Fiona Cunningham ,
Sarah E. Hunt ,
Baron Koylass,
Nitin Kumar,
Gary Saunders ,
April Shen,
Andres F. Silva,
Kirill Tsukanov ,
Sundararaman Venkataraman,
Paul Flicek ,
Helen Parkinson,
Thomas M. Keane
The European Variation Archive: a FAIR resource of genomic variation for all species
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2020
Adam Frankish ,
Mark Diekhans ,
Irwin Jungreis ,
Julien Lagarde,
Jane E. Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James C. Wright,
Joel Armstrong,
If Barnes,
Andrew Berry,
Alexandra Bignell,
Carles Boix,
Silvia Carbonell Sala,
Fiona Cunningham
and 41 other authors
Download from academic.oup.com
,
Mark Diekhans ,
Irwin Jungreis ,
Julien Lagarde,
Jane E. Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James C. Wright,
Joel Armstrong,
If Barnes,
Andrew Berry,
Alexandra Bignell,
Carles Boix,
Silvia Carbonell Sala,
Fiona Cunningham
and 41 other authors
Download from academic.oup.com
2018
Adam Frankish ,
Mark Diekhans,
Anne-Maud Ferreira,
Rory Johnson,
Irwin Jungreis ,
Jane Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James Wright,
Joel Armstrong,
If Barnes,
Andrew Berry,
Alexandra Bignell,
Silvia Carbonell Sala,
Jacqueline Chrast
and 40 other authors
,
Mark Diekhans,
Anne-Maud Ferreira,
Rory Johnson,
Irwin Jungreis ,
Jane Loveland ,
Jonathan M. Mudge,
Cristina Sisu,
James Wright,
Joel Armstrong,
If Barnes,
Andrew Berry,
Alexandra Bignell,
Silvia Carbonell Sala,
Jacqueline Chrast
and 40 other authors
GENCODE reference annotation for the human and mouse genomes
Download from doi.org
2014
Fiona Cunningham ,
M. Ridwan Amode,
M. Ridwan Amode,
Daniel Barrell,
Kathryn Beal,
Konstantinos Billis,
Simon Brent,
Denise Carvalho-Silva ,
Peter Clapham,
Guy Coates ,
Stephen Fitzgerald,
Laurent Gil,
Carlos García Giron,
Leo Gordon,
Thibaut Hourlier
and 36 other authors
Download from doi.org
,
M. Ridwan Amode,
M. Ridwan Amode,
Daniel Barrell,
Kathryn Beal,
Konstantinos Billis,
Simon Brent,
Denise Carvalho-Silva ,
Peter Clapham,
Guy Coates ,
Stephen Fitzgerald,
Laurent Gil,
Carlos García Giron,
Leo Gordon,
Thibaut Hourlier
and 36 other authors
Download from doi.org
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