All papers authored by Xiaofei Yang
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Gaoyang Zheng ,
Peng Jia ,
Songbo Wang ,
Kai Ye
Pindel-TD: A Tandem Duplication Detector Based on A Pattern Growth Approach
Download from doi.org
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Peter A. Audano ,
Deyu Meng,
Kai Ye ,
Jacob I. Flores,
Walter Kosters ,
Xiaofei Yang ,
Peng Jia,
Tobias Marschall ,
Christine R. Beck
SVision: a deep learning approach to resolve complex structural variants
Download from www.nature.com
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Bo Wang ,
Tingjie Wang,
Jiadong Lin,
Songbo Wang,
Xixi Zhao,
Tun Xu,
Yizhuo Che,
Ningxin Dang,
Luyao Ren,
Yujing Zhang,
Xia Wang,
Fan Liang
and 6 other authors
Haplotype-resolved assemblies and variant benchmark of a Chinese Quartet
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Xiaofei Yang ,
Yanyan Jia ,
Zihang Li ,
Guangbo Tang,
Xiujuan Li,
Bo Wang ,
Tingjie Wang ,
Jiadong Lin ,
Li Guo,
Kai Ye
Download from onlinelibrary.wiley.com
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Walter Kosters,
Tun Xu,
Micheal C. Zody,
Yanyan Jia,
Mark B. Gerstein,
Ashley D. Sanders,
Songbo Wang,
Michael E. Talkowski,
Qihui Zhu,
Ryan E. Mills,
Jan O. Korbel,
Mallory Ryan,
Tobias Marschall
and 37 other authors
Mako: A Graph-based Pattern Growth Approach to Detect Complex Structural Variants
Download from doi.org
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Qihui Zhu ,
Xiaofei Yang ,
Silvia Liu ,
Eliza Cerveira ,
Mallory Ryan ,
Adam Mil-Homens ,
Lauren Bellfy ,
Kai Ye ,
Charles Lee ,
Chengsheng Zhang
JAX-CNV: A Whole-genome Sequencing-based Algorithm for Copy Number Detection at Clinical Grade Level
Download from doi.org
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Shenghan Gao,
Li Guo ,
Bo Wang,
Yanyan Jia,
Jian Zhou,
Yizhuo Che,
Peng Jia ,
Jiadong Lin,
Tun Xu,
Jianyong Sun,
Kai Ye
Download from www.nature.com
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Xiaofei Yang ,
Yanyan Jia ,
Yu Xu ,
Peng Jia ,
Ningxin Dang ,
Songbo Wang ,
Tun Xu ,
Xixi Zhao ,
Shenghan Gao ,
Quanbin Dong ,
Kai Ye
High-quality Arabidopsis thaliana Genome Assembly with Nanopore and HiFi Long Reads
Download from doi.org
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Peter A. Audano ,
Qihui Zhu ,
Bernardo Rodriguez-Martin ,
David Porubsky ,
Marc Jan Bonder ,
Arvis Sulovari ,
Jana Ebler ,
Weichen Zhou ,
Rebecca Serra Mari ,
Feyza Yilmaz ,
Xuefang Zhao ,
PingHsun Hsieh ,
Joyce Lee ,
Sushant Kumar
and 50 other authors
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
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Shenghan Gao,
Tingjie Wang,
Boyu Yang,
Ningxin Dang,
Kai Ye
gCAnno: a graph-based single cell type annotation method
Download from doi.org
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Xiaofei Yang ,
Li Guo ,
Bowen Liu ,
Jiadong Lin,
Hao Liang ,
Jianyong Sun ,
Chengsheng Zhang ,
Kai Ye
Download from doi.org
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Wan-Ping Lee,
Kai Ye,
Charles Lee
One reference genome is not enough
Download from link.springer.com
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Jiadong Lin,
Kai Ye
PVTree: A Sequential Pattern Mining Method for Alignment Independent Phylogeny Reconstruction
Download from doi.org
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