Researcher
Rahuman S. Malik Sheriff
European Bioinformatics Institute
Statistics
28 papers found
All papers authored by Rahuman S. Malik Sheriff
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Hernán E. Grecco
Poincaré and SimBio: a versatile and extensible Python ecosystem for modeling systems
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Barbara Szomolay,
Marek Ostaszewski,
Ilja Arts,
Rui Benfeitas,
Victoria Dominguez Del Angel ,
Elena Domínguez-Romero,
Polonca Ferk,
Dirk Fey,
Carole Goble,
Martin Golebiewski ,
Kristina Gruden,
Katharina F. Heil ,
Henning Hermjakob
and 23 other authors
Systems Biology in ELIXIR: modelling in the spotlight
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A. Niarakis ,
T. Helikar,
G. An ,
B. Shapiro ,
R. S. Malik-Sheriff ,
T. J. Sego,
A. Knapp ,
P. Macklin,
J. A. Glazier
Building digital twins of the human immune system: toward a roadmap
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Lucian P. Smith ,
Dan Vasilescu,
Gnaneswara Marupilla,
Michael Wilson ,
Eran Agmon ,
Henry Agnew ,
Steven S. Andrews ,
Azraf Anwar,
Moritz E. Beber ,
Frank T. Bergmann ,
David Brooks ,
Lutz Brusch ,
Laurence Calzone ,
Kiri Choi
and 60 other authors
BioSimulators: a central registry of simulation engines and services for recommending specific tools
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James Osborne,
Gilberto Gonzalez-Parra,
Eric Forgoston,
Ruth Bowness,
Yaling Liu,
Robin Thompson,
Winston Garira,
Jacob Barhak,
John Rice,
Marcella Torres,
Hana M. Dobrovolny,
Tingting Tang,
William Waites
and 3 other authors
Model Integration in Computational Biology: The Role of Reproducibility, Credibility and Utility
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,
Alex Bateman ,
Cath Brooksbank,
Anton I. Petrov ,
Rahuman S. Malik-Sheriff ,
Michele Ide-Smith,
Henning Hermjakob ,
Paul Flicek ,
Rolf Apweiler,
Ewan Birney ,
Johanna McEntyre
The European Bioinformatics Institute (EMBL-EBI) in 2021
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,
Sarah Keating,
Rahuman S. Malik Sheriff
Ten Simple Rules for FAIR Sharing of Experimental and Clinical Data with the Modeling Community
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Sarah Keating,
Rahuman S. Malik Sheriff
Ten Simple Rules for Sharing Experimental and Clinical Data with the Modeling Community
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Reproducibility in systems biology modelling
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Chinmay Arankalle,
Krishna Tiwari,
Tung V. N. Nguyen,
Henning Hermjakob ,
Rahuman S. Malik Sheriff
BioModels Parameters: a treasure trove of parameter values from published systems biology models
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Martin Golebiewski ,
Michael L. Blinov ,
Padraig Gleeson ,
Henning Hermjakob ,
Michael Hucka ,
Esther Thea Inau ,
Sarah M. Keating ,
Matthias König ,
Olga Krebs ,
Rahuman S. Malik-Sheriff ,
David Nickerson ,
Ernst Oberortner,
Herbert M. Sauro ,
Falk Schreiber
and 4 other authors
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Alok Maity,
Yi-Fang Wang,
Amelia Edwards,
Ming Jiang,
Michael Howell,
Robert Goldstone,
Roy Wollman,
Philip East,
Silvia D. M. Santos
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Martin Kuiper,
Marek Ostaszewski ,
Rahuman S. Malik Sheriff ,
Cristina Casals-Casas,
Denis Thieffry,
Tom C. Freeman,
Paul Thomas,
Vasundra Touré,
Vincent Noël,
Gautier Stoll ,
Julio Saez-Rodriguez ,
Aurélien Naldi,
Eugenia Oshurko ,
Ioannis Xenarios
and 4 other authors
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Mihai Glont,
Tung V. N. Nguyen,
Krishna Tiwari,
Matthew G. Roberts,
Ashley Xavier,
Manh T. Vu,
Jinghao Men,
Matthieu Maire,
Sarubini Kananathan,
Emma L. Fairbanks,
Johannes P. Meyer,
Chinmay Arankalle,
Thawfeek M. Varusai ,
Vincent Knight-Schrijver
and 9 other authors
BioModels—15 years of sharing computational models in life science
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Frank T. Bergmann ,
Claudine Chaouiya,
Andreas Dräger ,
Stefan Hoops ,
Sarah M. Keating ,
Matthias König ,
Nicolas Le Novère ,
Chris J. Myers ,
Brett G. Olivier ,
Sven Sahle,
James C. Schaff ,
Rahuman Sheriff ,
Lucian P. Smith ,
Dagmar Waltemath
and 2 other authors
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Jon Timmis,
Marcus J. Tindall,
Piet H. Graaf,
Paolo Vicini,
James W. T. Yates
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Moritz Emanuel Beber ,
Christian Lieven ,
Brett G. Olivier,
Frank T. Bergmann ,
Jennifer A. Bartell ,
Lars M. Blank ,
Beber Me,
Birgitta Elisabeth Ebert ,
Janaka N. Edirisinghe ,
Olivier Bg,
Meric Ataman ,
Jose P. Faria ,
Adam Feist ,
Georgios Fengos
and 60 other authors
Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite
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