Danielle Karyadi - Dissemin

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All papers authored by Danielle Karyadi

This paper is made freely available by the publisher.

2023 Jung Kim

ORCID

, Danielle M. Karyadi

ORCID

, Stephen W. Hartley

ORCID

, Bin Zhu, Mingyi Wang

ORCID

, Dongjing Wu, Lei Song, Gregory T. Armstrong, Smita Bhatia

ORCID

, Leslie L. Robison, Yutaka Yasui, Brian Carter, Joshua N. Sampson, Neal D. Freedman

ORCID

, Alisa M. Goldstein and 5 other authors

Inflated expectations: Rare-variant association analysis using public controls

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2021 Morton Lm, Lindsay M. Morton

ORCID

, Karyadi Dm, Danielle M. Karyadi

ORCID

ORCID

, Bogdanova Ti, Eric T. Dawson

ORCID

, Dawson Et, Steinberg Mk, Mia K. Steinberg

ORCID

, Dai J., Jieqiong Dai, Stephen W. Hartley

ORCID

, Hartley Sw, Sara J. Schonfeld

ORCID

and 63 other authors

Radiation-related genomic profile of papillary thyroid carcinoma after the Chernobyl accident

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Shu-Hong Lin, Youjin Wang, Stephen W. Hartley, Danielle M. Karyadi

ORCID

, Olivia W. Lee, Bin Zhu, Weiyin Zhou, Derek W. Brown, Erin Beilstein-Wedel, Rohan Hazra, Deborah Kacanek, Ellen G. Chadwick, Carmen J. Marsit, Miriam C. Poirier, Sean S. Brummel and 3 other authors

In-utero exposure to zidovudine-containing antiretroviral therapy and clonal hematopoiesis in HIV-exposed uninfected newborns

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Jung Kim

ORCID

, Kelvin C. de Andrade, Matthew Gianferante, Danielle M. Karyadi

ORCID

, Stephen W. Hartley, Megan N. Frone

ORCID

, Wen Luo, Leslie L. Robison, Gregory T. Armstrong, Smita Bhatia, Michael Dean

ORCID

, Meredith Yeager, Bin Zhu

ORCID

, Lei Song, Joshua N. Sampson

ORCID

and 30 other authors

Frequency of pathogenic germline variants in cancer-susceptibility genes in the Childhood Cancer Survivor Study

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2020 Lindsay M. Morton, Danielle M. Karyadi

ORCID

, Stephen W. Hartley, Megan N. Frone, Joshua N. Sampson, Rebecca M. Howell, Joseph P. Neglia, Michael A. Arnold, Belynda D. Hicks, Kristine Jones, Bin Zhu, Casey L. Dagnall, Eric Karlins, Meredith S. Yeager, Wendy M. Leisenring and 13 other authors

Subsequent Neoplasm Risk Associated With Rare Variants in DNA Damage Response and Clinical Radiation Sensitivity Syndrome Genes in the Childhood Cancer Survivor Study

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Lisa Mirabello, Bin Zhu, Roelof Koster, Eric Karlins, Michael Dean, Meredith Yeager, Matthew Gianferante, Logan G. Spector, Lindsay M. Morton, Danielle Karyadi

ORCID

, Leslie L. Robison, Gregory T. Armstrong, Smita Bhatia, Lei Song, Nathan Pankratz and 34 other authors

Frequency of Pathogenic Germline Variants in Cancer-Susceptibility Genes in Patients With Osteosarcoma

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2019 Jocelyn Plassais

ORCID

, Jaemin Kim, Brian W. Davis

ORCID

, Danielle M. Karyadi

ORCID

, Andrew N. Hogan, Alex C. Harris, Brennan Decker

ORCID

, Heidi G. Parker, Elaine A. Ostrander

ORCID

Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology

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This paper is made freely available by the publisher.

2018 L. M. FitzGerald

ORCID

, S. Zhao, A. Leonardson, M. S. Geybels, S. Kolb, D. W. Lin, J. L. Wright, R. Eeles

ORCID

, Z. Kote-Jarai, K. Govindasami, G. G. Giles, M. C. Southey, J. Schleutker, T. L. Tammela, C. Sipeky

ORCID

and 10 other authors

Germline variants in IL4, MGMT and AKT1 are associated with prostate cancer-specific mortality: An analysis of 12,082 prostate cancer cases

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2016 Nilah M. M. Ioannidis

ORCID

, Joseph H. H. Rothstein, Vikas Pejaver, Sumit Middha, Shannon K. K. McDonnell, Saurabh Baheti, Anthony Musolf, Qing Li, Emily Holzinger, Danielle Karyadi

ORCID

, Lisa A. A. Cannon-Albright, Craig C. C. Teerlink, Janet L. L. Stanford, William B. B. Isaacs, Jianfeng F. Xu and 26 other authors

REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants

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Dm Karyadi

ORCID

, Milan S. Geybels, Eric Karlins, Brennan Decker, Laura McIntosh, Amy Hutchinson, Suzanne Kolb, Sk McDonnell, Belynda Hicks, Sumit Middha, Lm FitzGerald, Melissa S. DeRycke, Meredith Yeager, Dj Schaid, Sj Chanock and 4 other authors

Whole exome sequencing in 75 high-risk families with validation and replication in independent case-control studies identifies TANGO2 , OR5H14 , and CHAD as new prostate cancer susceptibility genes

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Brennan Decker, Danielle M. Karyadi

ORCID

, Brian W. Davis, Eric Karlins, Lori S. Tillmans, Janet L. Stanford, Stephen N. Thibodeau, Elaine A. Ostrander

Biallelic BRCA2 Mutations Shape the Somatic Mutational Landscape of Aggressive Prostate Tumors

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2015 Brennan Decker

ORCID

, Brian W. Davis

ORCID

, Maud Rimbault

ORCID

, Adrienne H. Long, Eric Karlins, Vidhya Jagannathan, Heidi G. Parker, Rebecca Reiman, Cord Drögemüller

ORCID

, Jason J. Corneveaux, Erica S. Chapman, Jeffery M. Trent, Tosso Leeb, Matthew J. Huentelman, Robert K. Wayne and 2 other authors

Comparison against 186 canid whole genome sequences reveals survival strategies of an ancient clonally transmissible canine tumor

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2014 Danielle M. Karyadi

ORCID

, Shanshan Zhao, Qianchuan He, Laura McIntosh, Jonathan L. Wright, Elaine A. Ostrander, Ziding Feng, Janet L. Stanford

Confirmation of genetic variants associated with lethal prostate cancer in a cohort of men from hereditary prostate cancer families

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2013 Liesel M. FitzGerald, Akash Kumar, Evan A. Boyle, Yuzheng Zhang, Laura M. McIntosh, Suzanne Kolb, Marni Stott-Miller, Tiffany Smith, Danielle M. Karyadi

ORCID

, Elaine A. Ostrander, Li Hsu, Jay Shendure

ORCID

, Janet L. Stanford

Germline Missense Variants in the BTNL2 Gene Are Associated with Prostate Cancer Susceptibility

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Ra A. Eeles, Aa A. Olama, Ej J. Saunders, Da A. Leongamornlert, Malgorzata Tymrakiewicz, De E. Neal, Craig Luccarini, Loic Le Marchand, Ken Muir, Gianluca Severi, Fredrik Wiklund, Tj J. Key, Fredrick Schumacher, Rc C. Travis, Loic Le Marchand and 133 other authors

Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.

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Danielle M. Karyadi

ORCID

, Eric Karlins, Brennan Decker, Bridgett M. vonHoldt, Gretchen Carpintero-Ramirez, Heidi G. Parker, Robert K. Wayne, Elaine A. Ostrander

A Copy Number Variant at the KITLG Locus Likely Confers Risk for Canine Squamous Cell Carcinoma of the Digit

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2012 Marni Stott-Miller, Danielle M. Karyadi

ORCID

, Tiffany King, Tiffany Smith, Erika M. Kwon, Suzanne Kolb, Janet L. Stanford, Elaine A. Ostrander

HOXB13 Mutations in a Population-Based, Case Control Study of Prostate Cancer

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This paper is available in a repository.

Ali Amin Al Olama, Zsofia Kote-Jarai, Fredrick R. Schumacher, Fredrik Wiklund, Ali Amin Al Olama, Gianluca Severi, David E. Neal, Michael J. Thun, Afshan Siddiq, Ruth C. Travis, Elio Riboli, Timothy J. Key, Johanna Schleutker, Teuvo L. J. Tammela, Maren Weischer and 141 other authors

A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease

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Daniel J. Schaid, Lovise Maehle, Jianfeng Xu, Lovise M??hle, Isaac Powell, Lovise M?hle, P?l M?ller, Gianluca Severi, P??l M??ller, Pal Moller, Lovise Mæhle, Pål Møller, Alice S. Whittemore, Ingrid Oakley-Girvan, Janet L. Stanford and 47 other authors

Analysis of Xq27-28 linkage in the international consortium for prostate cancer genetics (ICPCG) families

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Abigail L. Shearin, Benoit Hedan, Edouard Cadieu, Suzanne A. Erich, Emmett V. Schmidt, Daniel L. Faden, John Cullen, Jerome Abadie, Erika M. Kwon, Andrea Gröne, Patrick Devauchelle, Maud Rimbault

ORCID

, Danielle M. Karyadi

ORCID

, Mary Lynch, Francis Galibert and 5 other authors

The MTAP-CDKN2A Locus Confers Susceptibility to a Naturally Occurring Canine Cancer

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