Researcher
Jouni Sirén
University of California, Santa Cruz
Statistics
8 papers found
All papers authored by Jouni Sirén
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2023
Wen-Wei Liao 
,
Mobin Asri,
Jana Ebler,
Daniel Doerr ,
Marina Haukness ,
Glenn Hickey,
Shuangjia Lu ,
Julian K. Lucas,
Jean Monlong,
Haley J. Abel,
Silvia Buonaiuto,
Xian H. Chang,
Haoyu Cheng,
Justin Chu,
Vincenza Colonna
and 104 other authors
,
Mobin Asri,
Jana Ebler,
Daniel Doerr ,
Marina Haukness ,
Glenn Hickey,
Shuangjia Lu ,
Julian K. Lucas,
Jean Monlong,
Haley J. Abel,
Silvia Buonaiuto,
Xian H. Chang,
Haoyu Cheng,
Justin Chu,
Vincenza Colonna
and 104 other authors
A draft human pangenome reference
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2021
Jouni Sirén ,
Jean Monlong ,
Xian Chang ,
Adam M. Novak ,
Jordan M. Eizenga ,
Charles Markello ,
Jonas A. Sibbesen ,
Glenn Hickey ,
Pi-Chuan Chang ,
Andrew Carroll ,
Namrata Gupta ,
Stacey Gabriel,
Thomas W. Blackwell,
Aakrosh Ratan ,
Kent D. Taylor
and 5 other authors
,
Jean Monlong ,
Xian Chang ,
Adam M. Novak ,
Jordan M. Eizenga ,
Charles Markello ,
Jonas A. Sibbesen ,
Glenn Hickey ,
Pi-Chuan Chang ,
Andrew Carroll ,
Namrata Gupta ,
Stacey Gabriel,
Thomas W. Blackwell,
Aakrosh Ratan ,
Kent D. Taylor
and 5 other authors
Pangenomics enables genotyping of known structural variants in 5202 diverse genomes
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2020
Jouni Sirén ,
Jean Monlong,
Xian Chang,
Adam M. Novak,
Jordan M. Eizenga,
Charles Markello ,
Jonas A. Sibbesen,
Glenn Hickey,
Pi-Chuan Chang,
Andrew Carroll,
Namrata Gupta,
Stacey Gabriel,
Thomas W. Blackwell,
Aakrosh Ratan,
Kent D. Taylor
and 5 other authors
Upload
,
Jean Monlong,
Xian Chang,
Adam M. Novak,
Jordan M. Eizenga,
Charles Markello ,
Jonas A. Sibbesen,
Glenn Hickey,
Pi-Chuan Chang,
Andrew Carroll,
Namrata Gupta,
Stacey Gabriel,
Thomas W. Blackwell,
Aakrosh Ratan,
Kent D. Taylor
and 5 other authors
Upload
2019
Jouni Sirén ,
Erik Garrison,
Adam M. Novak,
Benedict Paten,
Richard Durbin
Download from doi.org
,
Erik Garrison,
Adam M. Novak,
Benedict Paten,
Richard Durbin
Download from doi.org
2017
Travis Gagie,
Giovanni Manzini ,
Jouni Sirén
,
Jouni Sirén
Wheeler graphs: A framework for BWT-based data structures
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Travis Gagie,
Aleksi Hartikainen,
Kalle Karhu,
Juha Kärkkäinen,
Gonzalo Navarro,
Simon J. Puglisi,
Jouni Sirén
Document retrieval on repetitive string collections
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2010
Veli Mäkinen,
Gonzalo Navarro,
Jouni Sirén ,
Niko Välimäki
,
Niko Välimäki
Storage and Retrieval of Highly Repetitive Sequence Collections
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