All papers authored by Rafael C. Jimenez
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Erick Antezana ,
Alexander Garcia ,
Evan Bolton ,
Rafael Jimenez ,
Pjotr Prins ,
Juan M. Banda ,
Toshiaki Katayama
Ten simple rules to run a successful BioHackathon
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Peter McQuilton ,
Philippe Rocca-Serra ,
Marina Soares e. Silva ,
Alejandra Gonzalez-Beltran ,
Massimiliano Izzo ,
Milo Thurston ,
Allyson Lister ,
Jessica Tenenbaum ,
Simon Hodson ,
Dominique Batista ,
Rebecca Lawrence,
Varsha Khodiyar ,
Ramon Granell ,
J. Myles Axton
and 56 other authors
FAIRsharing, a cohesive community approach to the growth in standards, repositories and policies
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Charlie Beirnaert ,
Christophe Caron,
Marta Cascante,
Victoria Dominguez ,
Warwick B. Dunn,
Timothy M. D. Ebbels,
Franck Giacomoni,
Alejandra Gonzalez-Beltran ,
Thomas Hankemeier ,
Kenneth Haug ,
Jose L. Izquierdo-Garcia,
Rafael C. Jimenez ,
Fabien Jourdan,
Namrata Kale
and 25 other authors
The future of metabolomics in ELIXIR
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Mathias Walzer ,
Rafael C. Jiménez ,
Wout Bittremieux ,
David Bouyssié ,
Christine Carapito ,
Fernando Corrales,
Myriam Ferro,
Albert J. R. Heck,
Peter Horvatovich ,
Martin Hubalek,
Lydie Lane,
Kris Laukens ,
Fredrik Levander,
Frederique Lisacek
and 11 other authors
A community proposal to integrate proteomics activities in ELIXIR
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Mateusz Kuzak,
Monther Alhamdoosh ,
Michelle Barker ,
Bérénice Batut ,
Mikael Borg,
Salvador Capella-Gutierrez ,
Neil Chue Hong,
Martin Cook,
Manuel Corpas ,
Madison Flannery,
Leyla Garcia ,
Josep L.-L. Gelpí,
Simon Gladman,
Carole Goble
and 34 other authors
Four simple recommendations to encourage best practices in research software
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Julie A. McMurry ,
Niklas Blomberg ,
Tony Burdett,
Wolfgang Mueller ,
Tom Conlin ,
Nathalie Conte ,
Melanie Courtot ,
John Deck ,
Jimenez Rc,
Michel Dumontier ,
Donal K. Fellows ,
Alejandra Gonzalez-Beltran ,
Philipp Gormanns
and 40 other authors
Download from doi.org
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Nick Juty ,
John Kunze ,
Greg Janée ,
Julie A. McMurry ,
Niall Beard ,
Rafael Jimenez ,
Jeffrey S. Grethe ,
Henning Hermjakob ,
Maryann E. Martone,
Tim Clark
Uniform Resolution of Compact Identifiers for Biomedical Data
Download from www.nature.com
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Kristoffer Rapacki,
Hervé Ménager,
Matúš Kalaš,
Emil Rydza,
Piotr Chmura ,
Christian Anthon,
Niall Beard ,
Karel Berka ,
Dan Bolser ,
Tim Booth,
Anthony Bretaudeau ,
Jan Brezovsky,
Rita Casadio,
Gianni Cesareni
and 57 other authors
Tools and data services registry: a community effort to document bioinformatics resources
Download from doi.org
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Allegra Via,
Maria Victoria Schneider
Data integration in biological research: An overview
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Manuel Corpas,
Alain Franc,
Rafael C. Jimenez ,
Jesus Marco de Lucas ,
Tommi Nyrönen,
Gergely Sipos,
Stephanie B. Suhr
Download from dx.doi.org
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Jimenez Rc,
Erik Bongcam-Rudloff,
Aidan Budd ,
Michelle D. Brazas,
Brazas Md,
Pedro L. Fernandes,
Fernandes Pl,
Bruno Gaeta,
Celia van Gelder ,
Eija Korpelainen,
Fran Lewitter,
Annette McGrath,
Daniel MacLean
and 11 other authors
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Bianca H. Habermann
PsicquicGraph, a BioJS component to visualize molecular interactions from PSICQUIC servers
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Sequence, a BioJS component for visualising sequences
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Bianca H. Habermann
KEGGViewer, a BioJS component to visualize KEGG Pathways
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Rafael Jimenez ,
Seth J. Carbon,
Carbon Sj,
Alex García,
Leyla Garcia,
Tatyana Goldberg,
John Gomez,
Alexis Kalderimis,
Suzanna E. Lewis,
Lewis Se,
Ian Mulvany,
Aleksandra Pawlik,
Francis Rowland ,
Gustavo Salazar
and 10 other authors
BioJS: An open source standard for biological visualisation - its status in 2014
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Gayatri Chavali,
Noemi del-Toro,
Carol Chen ,
Margaret Duesbury,
Marine Dumousseau,
Eugenia Galeota,
Ursula Hinz,
Bernd Roechert
and 21 other authors
The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
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Christina S. Kim,
Ning Deng,
Allen K. Kim,
Jeong Ho Choi,
Ivette Zelaya,
David Liem,
David Meyer,
Jacob Odeberg ,
Caiyun Fang,
Hao-Jie Lu
and 9 other authors
Integration of Cardiac Proteome Biology and Medicine by a Specialized Knowledgebase
Download from www.ncbi.nlm.nih.gov
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Javier De Las Rivas ,
J. De Las Rivas,
Jacqueline Dreyer,
Fernandes Pl,
Pedro L. Fernandes,
Celia van Gelder ,
C. W. van Gelder,
Joachim Jacob
and 11 other authors
Best practices in bioinformatics training for life scientists
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Attwood Tk,
Kristian Rother,
Gustavo A. Salazar,
Reinhard Schneider,
Allegra Via,
Jimenez Rc,
Jose M. Villaveces,
Ping Yu,
Maria V. Schneider,
Rafael C. Jimenez ,
Albar Jp,
Juan P. Albar
and 39 other authors
iAnn: an event sharing platform for the life sciences
Download from academic.oup.com
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Marine Dumousseau,
Sandra Orchard,
Rafael C. Jimenez ,
Eugenia Galeota,
Guillaume Launay,
Johannes Goll,
Karin Breuer,
Keiichiro Ono,
Lukasz Salwinski,
Henning Hermjakob
A new reference implementation of the PSICQUIC web service
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