Alexandre M. J. J. Bonvin - Dissemin

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Papers authored by Alexandre M. J. J. Bonvin

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2012 Huang Yj, Antonio Rosato, James M. M. Aramini, Cheryl Arrowsmith, Aramini Jm, Doreleijers Jf, Anurag Bagaria, David Baker, Jurgen F. Doreleijers, P. Guntert, Andrea Cavalli, Andrea Giachetti, Jonker Hr, Alexander Eletsky, Aleksandras Gutmanas and 40 other authors

Blind Testing of Routine, Fully Automated Determination of Protein Structures from NMR Data

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E. Mylonakis, G. Tegos, Panagiotis L. Kastritis, Alexandre M. J. J. Bonvin

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Predicting and Dissecting High-order Molecular Complexity by Information-driven Biomolecular Docking

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João P. G. L. M. Rodrigues, Mikael Trellet, Christophe Schmitz, Panagiotis Kastritis

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, Ezgi Karaca, Adrien S. J. Melquiond

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, Alexandre M. J. J. Bonvin

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Clustering biomolecular complexes by residue contacts similarity

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Janosch Hennig, Sjoerd J. de Vries, Klaus Dm Hennig, Leah Randles, Kylie J. Walters, Maria Sunnerhagen, Alexandre Mjj Bonvin

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MTMDAT-HADDOCK: High-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry

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2011 Panagiotis L. Kastritis

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, Aalt D. J. van Dijk, A. D. J. van Dijk, Alexandre M. J. J. Bonvin

ORCID

Explicit Treatment of Water Molecules in Data-Driven Protein–Protein Docking: The Solvated HADDOCKing Approach

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Sarel J. Fleishman, Timothy A. Whitehead, Eva-Maria Strauch, Jacob E. Corn, Sanbo Qin, Huan-Xiang Zhou

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, Julie C. Mitchell, Omar N. A. Demerdash, Mayuko Takeda-Shitaka, Genki Terashi, Iain H. Moal, Xiaofan Li, Paul A. Bates, Martin Zacharias, Hahnbeom Park and 87 other authors

Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology

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Adrien S. J. Melquiond

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, Ezgi Karaca, Panagiotis L. Kastritis

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, Alexandre M. J. J. Bonvin

ORCID

Next challenges in protein-protein docking: from proteome to interactome and beyond

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Dirk Stratmann, Rolf Boelens, Alexandre M. J. J. Bonvin

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Quantitative use of chemical shifts for the modeling of protein complexes

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Christophe Schmitz, Alexandre M. J. J. Bonvin

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Protein–protein HADDocking using exclusively pseudocontact shifts

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Yiannis C. Fiamegos, Panagiotis L. Kastritis

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, Vassiliki Exarchou, Haley Han, Alexandre M. J. J. Bonvin

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, Jacques Vervoort, Kim Lewis, Michael R. Hamblin

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, George P. Tegos

Antimicrobial and Efflux Pump Inhibitory Activity of Caffeoylquinic Acids from Artemisia absinthium against Gram-Positive Pathogenic Bacteria

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Sjoerd J. de Vries, Alexandre M. J. J. Bonvin

ORCID

CPORT: A Consensus Interface Predictor and Its Performance in Prediction-Driven Docking with HADDOCK

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Eric Escobar-Cabrera, Mark Okon, Desmond K. W. Lau, Christopher F. Dart, Alexandre M. J. J. Bonvin

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, Lawrence P. McIntosh

Characterizing the N- and C-terminal Small Ubiquitin-like Modifier (SUMO)-interacting Motifs of the Scaffold Protein DAXX

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Christian Koehler, Ludovic Carlier, Daniele Veggi, Enrico Balducci, Federica Di Marcello, Mario Ferrer-Navarro, Mariagrazia Pizza, Xavier Daura, Marco Soriani, Rolf Boelens, Alexandre M. J. J. Bonvin

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Structural and Biochemical Characterization of NarE, an Iron-containing ADP-ribosyltransferase from Neisseria meningitidis

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Mickael Krzeminski, Tanuja Singh, Sabine André, Martin Lensch, Albert M. Wu, Alexandre M. J. J. Bonvin

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, Hans-Joachim Gabius

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Human galectin-3 (Mac-2 antigen): Defining molecular switches of affinity to natural glycoproteins, structural and dynamic aspects of glycan binding by flexible ligand docking and putative regulatory sequences in the proximal promoter region

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Jia-Hau Liu, Tanuja Singh, Albert M. Wu, Sabine André, Martin Lensch, Alexandre M. J. J. Bonvin

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, Mickael Krzeminski, Hans-Christian Siebert, Herbert Kaltner, Hans-Joachim Gabius

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, June H. Wu

Adhesion/growth-regulatory galectins: insights into their ligand selectivity using natural glycoproteins and glycotopes.

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2010 A. Neumoin, A. Leonchiks, P. Petit, L. Vuillard, M. Pizza, M. Soriani, R. Boelens, A. M. J. J. Bonvin

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1H, 13C and 15N assignment of the GNA1946 outer membrane lipoprotein from Neisseria meningitidis

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Giuseppe Nicastro, Sokol V. Todi, Ezgi Karaca, Alexandre M. J. J. Bonvin

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, Henry L. Paulson, Annalisa Pastore

Understanding the Role of the Josephin Domain in the PolyUb Binding and Cleavage Properties of Ataxin-3

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Ludovic Carlier, Christian Koehler, Daniele Veggi, Mariagrazia Pizza, Marco Soriani, Rolf Boelens, Alexandre M. J. J. Bonvin

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NMR resonance assignments of NarE, a putative ADP-ribosylating toxin from Neisseria meningitidis

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Sjoerd J. de Vries, Adrien S. J. Melquiond

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, Panagiotis L. Kastritis

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, Ezgi Karaca, Annalisa Bordogna, Marc van Dijk, João P. G. L. M. Rodrigues, Alexandre M. J. J. Bonvin

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Strengths and weaknesses of data-driven docking in critical assessment of prediction of interactions

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T. Schneider, T. Kruse, R. Wimmer

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, I. Wiedemann, V. Sass, U. Pag, A. Jansen, A. K. Nielsen, P. H. Mygind, D. S. Raventos, S. Neve, B. Ravn, A. M. J. J. Bonvin

ORCID

, L. De Maria, A. S. Andersen and 3 other authors

Plectasin, a Fungal Defensin, Targets the Bacterial Cell Wall Precursor Lipid II

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