Ivaylo Ivanov - Dissemin

All papers authored by Ivaylo Ivanov

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2019 Senthil K. Perumal, Xiaojun Xu, Chunli Yan, Ivaylo Ivanov

, Stephen J. Benkovic

Recognition of a Key Anchor Residue by a Conserved Hydrophobic Pocket Ensures Subunit Interface Integrity in DNA Clamps

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E. Kathleen Carter

, Sarah Laughlin-Toth

, Thomas Dodd

, W. David Wilson

, Ivaylo Ivanov

Small molecule binders recognize DNA microstructural variations via an induced fit mechanism

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This paper is made freely available by the publisher.

2017 Yan Han

, Chunli Yan, Thi Hoang Duong Nguyen, Ashleigh J. Jackobel, Ivaylo Ivanov

, Bruce A. Knutson

, Yuan He

Structural mechanism of ATP-independent transcription initiation by RNA polymerase I

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Fahad Rashid, Paul D. Harris, Manal S. Zaher, Mohamed A. Sobhy, Luay I. Joudeh, Chunli Yan, Hubert Piwonski

, Susan E. Tsutakawa, Ivaylo Ivanov

, John A. Tainer, Satoshi Habuchi, Samir M. Hamdan

Single-molecule FRET unveils induced-fit mechanism for substrate selectivity in flap endonuclease 1

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Jing Zhang, Kun Qian, Chunli Yan, Maomao He, Brenson A. Jassim, Ivaylo Ivanov

, Yujun George Zheng

Discovery of decamidine as a new and potent PRMT1 inhibitor

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2016 Sarah Laughlin-Toth

, W. David Wilson, E. Kathleen Carter, Carter Ek, Ivaylo Ivanov

, Wilson Wd

DNA microstructure influences selective binding of small molecules designed to target mixed-site DNA sequences

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Bradley R. Kossmann, Monica Abdelmalak, Sophia Lopez, Gabrielle Tender, Chunli Yan, Yves Pommier, Christophe Marchand, Ivaylo Ivanov

Discovery of selective inhibitors of tyrosyl-DNA phosphodiesterase 2 by targeting the enzyme DNA-binding cleft

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Ravi Chakra Turaga

, Lu Yin, Jenny J. Yang, Hsiauwei Lee, Ivaylo Ivanov

, Chunli Yan, Hua Yang, Hans E. Grossniklaus, Siming Wang, Cheng Ma, Li Sun, Zhi-Ren Liu

Rational design of a protein that binds integrin αvβ3 outside the ligand binding site

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Xiaojun Xu, Chunli Yan, Bradley R. Kossmann, Ivaylo Ivanov

Secondary Interaction Interfaces with PCNA Control Conformational Switching of DNA Polymerase PolB from Polymerization to Editing

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Yuan He, Chunli Yan, Jie Fang, Carla Inouye, Robert Tjian, Ivaylo Ivanov

, Eva Nogales

Near-atomic resolution visualization of human transcription promoter opening

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2015 William H. Hudson, Bradley R. Kossmann, Ian Mitchelle S. de Vera, Shih-Wei Chuo, Emily R. Weikum, Geeta N. Eick

, Joseph W. Thornton, Joseph W. Thorntone, Ivaylo N. Ivanov

, Douglas J. Kojetin, Eric A. Ortlund

Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space

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Paul M. Musille, Bradley R. Kossmann, Jeffrey A. Kohn, Ivaylo Ivanov

, Eric A. Ortlund

Unexpected Allosteric Network Contributes to LRH-1 Co-regulator Selectivity

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Chris A. Brosey, Sarah E. Soss, Sonja Brooks, Chunli Yan, Ivaylo Ivanov

, Kavita Dorai, Walter J. Chazin

Functional Dynamics in Replication Protein A DNA Binding and Protein Recruitment Domains

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Xiaojun Xu, Chunli Yan, Robert Wohlhueter, Ivaylo Ivanov

Integrative Modeling of Macromolecular Assemblies from Low to Near-Atomic Resolution

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2014 Bradley Kossmann, Ivaylo Ivanov

Alkylpurine Glycosylase D Employs DNA Sculpting as a Strategy to Extrude and Excise Damaged Bases

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Leilei Yan, Chunli Yan, Kun Qian, Hairui Su, Stephanie A. Kofsky-Wofford, Wei-Chao Lee, Xinyang Zhao, Meng-Chiao Ho, Ivaylo Ivanov

, Yujun George Zheng

Diamidine Compounds for Selective Inhibition of Protein Arginine Methyltransferase 1

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2013 Xiaojun Xu, Carlo Guardiani, Chunli Yan, Ivaylo Nikolaev Ivanov

Opening pathways of the DNA clamps proliferating cell nuclear antigen and Rad9-Rad1-Hus1

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Lin Wang, Xiaojun Xu, Ravindra Kumar, Buddhadev Maiti, C. Tony Liu, C. Tony Liu, Ivaylo Ivanov

, Tae-Hee Lee, Stephen J. Benkovic

Probing DNA clamps with single-molecule force spectroscopy

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Susan E. Tsutakawa, David S. Shin, Clifford D. Mol, Tadahide Izumi, Andrew S. Arvai, Anil K. Mantha, Bartosz Szczesny, Ivaylo N. Ivanov

, David J. Hosfield, Buddhadev Maiti, Mike E. Pique, Kenneth A. Frankel, Kenichi Hitomi, Richard P. Cunningham, Sankar Mitra and 1 other authors

Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes*

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Chris A. Brosey, Chunli Yan, Susan E. Tsutakawa, William T. Heller, Robert P. Rambo, John A. Tainer, Ivaylo Ivanov

, Walter J. Chazin,

A new structural framework for integrating replication protein A into DNA processing machinery

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All papers authored by Ivaylo Ivanov