Benjamin Neely - Dissemin

All papers authored by Benjamin Neely

This paper is made freely available by the publisher.

2023 Brian C. Searle

, Allis Chien

, Antonius Koller, David Hawke

, Anthony W. Herren

, Jenny Kim Kim, Kimberly A. Lee

, Ryan D. Leib

, Alissa J. Nelson

, Purvi Patel

, Jian Min Ren, Paul M. Stemmer

, Yiying Zhu, Benjamin A. Neely

, Bhavin Patel

A Multipathway Phosphopeptide Standard for Rapid Phosphoproteomics Assay Development

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Benjamin A. Neely

, Viktoria Dorfer

, Lennart Martens

, Isabell Bludau, Robbin Bouwmeester

, Sven Degroeve

, Eric W. Deutsch

, Siegfried Gessulat, Lukas Käll

, Pawel Palczynski, Samuel H. Payne

, Tobias Greisager Rehfeldt

, Tobias Schmidt

, Veit Schwämmle

, Julian Uszkoreit

and 3 other authors

Toward an Integrated Machine Learning Model of a Proteomics Experiment

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This paper was not found in any repository, but could be made available legally by the author.

2022 Rob Marissen

, Madhushri S. Varunjikar

, Jeroen F. J. Laros, Josef D. Rasinger, Benjamin A. Neely

, Magnus Palmblad

compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets

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2020 Benjamin C. Orsburn, Conor Jenkins

, Sierra M. Miller, Benjamin A. Neely

, Namandje N. Bumpus, Namandje M. Bumpus

In silico approach toward the identification of unique peptides from viral protein infection: Application to COVID-19

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

2019 W. Clay Davis, Lisa E. Kilpatrick, Debra L. Ellisor, Benjamin A. Neely

Characterization of a Human Liver NIST Reference Material fit for Proteomics Applications

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2018 Benjamin A. Neely

, Katherine C. Prager, Alison M. Bland, Christine Fontaine, Frances M. Gulland, Michael G. Janech

Proteomic Analysis of Urine from California Sea Lions (Zalophus californianus): a Resource for Urinary Biomarker Discovery

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Benjamin A. Neely

, Debra L. Ellisor, William Clay Davis

Proteomics as a metrological tool to evaluate genome annotation accuracy following de novo genome assembly: a case study using the Atlantic bottlenose dolphin (Tursiops truncatus)

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This paper is available in a repository.

2017 Joelle N. Zambrano, Benjamin A. Neely

, Elizabeth S. Yeh

Hormonally up-regulated neu-associated kinase: A novel target for breast cancer progression

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Benjamin A. Neely

, Paul E. Anderson

Complementary Domain Prioritization: A Method to Improve Biologically Relevant Detection in Multi-Omic Data Sets:

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2016 Stephanie Shao, Benjamin A. Neely

, Tzu-Cheg Kao, Janet Eckhaus, Jolie Bourgeois, Jasmin Brooks, Elizabeth E. Jones, Richard R. Drake, Kangmin Zhu

Proteomic Profiling of Serial Prediagnostic Serum Samples for Early Detection of Colon Cancer in the U.S. Military

Download from aacrjournals.org

Benjamin A. Neely

, Christopher E. Wilkins, Laura A. Marlow, Dariya Malyarenko, Yunee Kim, Alexandr Ignatchenko, Heather Sasinowska, Maciek Sasinowski, Julius O. Nyalwidhe, Thomas Kislinger, John A. Copland, Richard R. Drake

Proteotranscriptomic Analysis Reveals Stage Specific Changes in the Molecular Landscape of Clear-Cell Renal Cell Carcinoma

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2015 Liliane Hobeika, Kelly J. Hunt, Benjamin A. Neely

, John M. Arthur

Comparison of the Rate of Renal Function Decline in NonProteinuric Patients With and Without Diabetes

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Mariana Pehar, Lauren E. Ball, Deep R. Sharma, Benjamin A. Harlan

, Susana Comte-Walters, Benjamin A. Neely

, Marcelo R. Vargas

Changes in protein expression and lysine acetylation induced by decreased glutathione levels in astrocytes

Download from www.mcponline.org

Benjamin A. Neely

, Jennifer L. Soper, Frances M. D. Gulland, P. Darwin Bell, Mark Kindy, John M. Arthur, Michael G. Janech

Proteomic analysis of cerebrospinal fluid in California sea lions (Zalophus californianus) with domoic acid toxicosis identifies proteins associated with neurodegeneration

Download from www.researchgate.net

Benjamin A. Neely

, Jason A. Ferrante, J. Mauro Chaves, J. Mauro Chaves, Jennifer L. Soper, Jonas S. Almeida, John M. Arthur, Frances M. D. Gulland, Michael G. Janech

Proteomic Analysis of Plasma from California Sea Lions (Zalophus californianus) Reveals Apolipoprotein E as a Candidate Biomarker of Chronic Domoic Acid Toxicosis

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2014 Thomas W. Powers, Benjamin A. Neely

, Yuan Shao, Huiyuan Tang, Dean A. Troyer, Anand S. Mehta, Brian B. Haab, Richard R. Drake

MALDI Imaging Mass Spectrometry Profiling of N-Glycans in Formalin-Fixed Paraffin Embedded Clinical Tissue Blocks and Tissue Microarrays

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Elizabeth Ellen Jones, Thomas W. Powers, Benjamin A. Neely

, Lisa H. Cazares, Dean A. Troyer, Alexander S. Parker, Richard R. Drake

MALDI Imaging Mass Spectrometry Profiling of Proteins and Lipids in Clear Cell Renal Cell Carcinoma

Download from www.ncbi.nlm.nih.gov

2013 Joseph L. Alge, Nithin Karakala, Benjamin A. Neely

, Michael G. Janech, James A. Tumlin, Lakhmir S. Chawla, Andrew D. Shaw, John M. Arthur

Association of Elevated Urinary Concentration of Renin-Angiotensin System Components and Severe AKI

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John M. Arthur, Elizabeth G. Hill, Joseph L. Alge, Evelyn C. Lewis, Benjamin A. Neely

, Michael G. Janech

, James A. Tumlin, Lakhmir S. Chawla, Andrew D. Shaw

Evaluation of 32 urine biomarkers to predict the progression of acute kidney injury after cardiac surgery

Download from www.ncbi.nlm.nih.gov

Stephen M. Roper, Marina Zemskova, Benjamin A. Neely

, Arch Martin, Peng Gao, E. Ellen Jones, Andrew S. Kraft, Richard R. Drake

Targeted glycoprotein enrichment and identification in stromal cell secretomes using azido sugar metabolic labeling

Download from www.ncbi.nlm.nih.gov

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All papers authored by Benjamin Neely