All papers authored by Damian Plichta
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2023
Emily C. Gentry,
Morgan Panitchpakdi,
Allison K. Stewart,
Hsueh-Han Lu 
,
Simone Zuffa,
Tingting Yan,
Damian R. Plichta ,
Mingxun Wang ,
Alan K. Jarmusch ,
Mashette Syrkin-Nikolau,
Hera Vlamakis ,
Amy Hemperly,
Niels Vande Casteele,
Ramnik J. Xavier ,
Andrew D. Patterson
and 15 other authors
,
Simone Zuffa,
Tingting Yan,
Damian R. Plichta ,
Mingxun Wang ,
Alan K. Jarmusch ,
Mashette Syrkin-Nikolau,
Hera Vlamakis ,
Amy Hemperly,
Niels Vande Casteele,
Ramnik J. Xavier ,
Andrew D. Patterson
and 15 other authors
Reverse metabolomics for the discovery of chemical structures from humans
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Joachim Johansen ,
Koji Atarashi ,
Yasumichi Arai,
Nobuyoshi Hirose,
Søren J. Sørensen ,
Tommi Vatanen ,
Mikael Knip ,
Kenya Honda ,
Ramnik J. Xavier ,
Simon Rasmussen ,
Damian R. Plichta
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,
Koji Atarashi ,
Yasumichi Arai,
Nobuyoshi Hirose,
Søren J. Sørensen ,
Tommi Vatanen ,
Mikael Knip ,
Kenya Honda ,
Ramnik J. Xavier ,
Simon Rasmussen ,
Damian R. Plichta
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Johannes F. Scheid ,
Basak Eraslan ,
Andrew Hudak ,
Eric M. Brown ,
Dallis Sergio ,
Toni M. Delorey ,
Devan Phillips ,
Ariel Lefkovith ,
Alison T. Jess ,
Lennard W. Duck ,
Charles O. Elson ,
Hera Vlamakis ,
Damian R. Plichta ,
Jacques Deguine ,
Ashwin N. Ananthakrishnan
and 3 other authors
,
Basak Eraslan ,
Andrew Hudak ,
Eric M. Brown ,
Dallis Sergio ,
Toni M. Delorey ,
Devan Phillips ,
Ariel Lefkovith ,
Alison T. Jess ,
Lennard W. Duck ,
Charles O. Elson ,
Hera Vlamakis ,
Damian R. Plichta ,
Jacques Deguine ,
Ashwin N. Ananthakrishnan
and 3 other authors
Remodeling of colon plasma cell repertoire within ulcerative colitis patients
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2022
Youxian Li ,
Eiichiro Watanabe ,
Yusuke Kawashima ,
Damian R. Plichta ,
Zhujun Wang,
Makoto Ujike ,
Qi Yan Ang ,
Runrun Wu,
Munehiro Furuichi ,
Kozue Takeshita,
Koji Yoshida ,
Keita Nishiyama,
Sean M. Kearney,
Wataru Suda,
Masahira Hattori
and 17 other authors
,
Eiichiro Watanabe ,
Yusuke Kawashima ,
Damian R. Plichta ,
Zhujun Wang,
Makoto Ujike ,
Qi Yan Ang ,
Runrun Wu,
Munehiro Furuichi ,
Kozue Takeshita,
Koji Yoshida ,
Keita Nishiyama,
Sean M. Kearney,
Wataru Suda,
Masahira Hattori
and 17 other authors
Identification of trypsin-degrading commensals in the large intestine
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Yancong Zhang ,
Amrisha Bhosle ,
Sena Bae,
Lauren J. McIver,
Gleb Pishchany,
Emma K. Accorsi ,
Kelsey N. Thompson ,
Cesar Arze ,
Ya Wang,
Ayshwarya Subramanian ,
Sean M. Kearney,
April Pawluk,
Damian R. Plichta ,
Ali Rahnavard ,
Afrah Shafquat
and 6 other authors
,
Amrisha Bhosle ,
Sena Bae,
Lauren J. McIver,
Gleb Pishchany,
Emma K. Accorsi ,
Kelsey N. Thompson ,
Cesar Arze ,
Ya Wang,
Ayshwarya Subramanian ,
Sean M. Kearney,
April Pawluk,
Damian R. Plichta ,
Ali Rahnavard ,
Afrah Shafquat
and 6 other authors
Discovery of bioactive microbial gene products in inflammatory bowel disease
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Joachim Johansen ,
Damian R. Plichta ,
Jakob Nybo Nissen,
Marie Louise Jespersen ,
Shiraz A. Shah ,
Ling Deng,
Jakob Stokholm ,
Hans Bisgaard ,
Dennis Sandris Nielsen ,
Søren J. Sørensen ,
Simon Rasmussen
,
Damian R. Plichta ,
Jakob Nybo Nissen,
Marie Louise Jespersen ,
Shiraz A. Shah ,
Ling Deng,
Jakob Stokholm ,
Hans Bisgaard ,
Dennis Sandris Nielsen ,
Søren J. Sørensen ,
Simon Rasmussen
Genome binning of viral entities from bulk metagenomics data
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2021
Yuko Sato ,
Koji Atarashi ,
Damian R. Plichta ,
Yasumichi Arai,
Satoshi Sasajima,
Sean M. Kearney,
Wataru Suda,
Kozue Takeshita,
Takahiro Sasaki,
Shoki Okamoto,
Ashwin N. Skelly ,
Yuki Okamura,
Hera Vlamakis ,
Youxian Li ,
Takeshi Tanoue
and 20 other authors
,
Koji Atarashi ,
Damian R. Plichta ,
Yasumichi Arai,
Satoshi Sasajima,
Sean M. Kearney,
Wataru Suda,
Kozue Takeshita,
Takahiro Sasaki,
Shoki Okamoto,
Ashwin N. Skelly ,
Yuki Okamura,
Hera Vlamakis ,
Youxian Li ,
Takeshi Tanoue
and 20 other authors
Novel bile acid biosynthetic pathways are enriched in the microbiome of centenarians
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2019
Xiaofang Jiang ,
A. Brantley Hall ,
Timothy D. Arthur ,
Damian R. Plichta ,
Christian T. Covington ,
Mathilde Poyet ,
Jessica Crothers,
Peter L. Moses ,
Andrew C. Tolonen ,
Hera Vlamakis ,
Eric J. Alm ,
Ramnik J. Xavier
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,
A. Brantley Hall ,
Timothy D. Arthur ,
Damian R. Plichta ,
Christian T. Covington ,
Mathilde Poyet ,
Jessica Crothers,
Peter L. Moses ,
Andrew C. Tolonen ,
Hera Vlamakis ,
Eric J. Alm ,
Ramnik J. Xavier
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2018
Gareth Frank Difford ,
Damian Rafal Plichta ,
Peter Løvendahl ,
Jan Lassen,
Samantha Joan Noel ,
Ole Højberg ,
André-Denis G. Wright,
Zhigang Zhu,
Lise Kristensen,
Bernt Guldbrandtsen,
Henrik Bjørn Nielsen ,
Goutam Sahana
,
Damian Rafal Plichta ,
Peter Løvendahl ,
Jan Lassen,
Samantha Joan Noel ,
Ole Højberg ,
André-Denis G. Wright,
Zhigang Zhu,
Lise Kristensen,
Bernt Guldbrandtsen,
Henrik Bjørn Nielsen ,
Goutam Sahana
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
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