All papers authored by Stephan Saalfeld
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Daniela Basurto-Lozada ,
Daniela Basurto Lozada,
Sébastien Besson ,
John Bogovic ,
Jordão Bragantini ,
Eva Maxfield Brown ,
Jean-Marie Burel ,
Xavier Casas Moreno ,
Xavier Casas Moreno,
Gustavo Quintas Glasner de Medeiros ,
Erin E. Diel ,
David Gault,
Satrajit S. Ghosh ,
Ilan Gold
and 58 other authors
OME-Zarr: a cloud-optimized bioimaging file format with international community support
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Mark Eddison ,
Greg Fleishman,
Martin Weigert ,
Shengjin Xu,
Tim Wang,
Konrad Rokicki ,
Cristian Goina,
Fredrick E. Henry,
Andrew L. Lemire ,
Uwe Schmidt,
Hui Yang ,
Karel Svoboda ,
Eugene W. Myers ,
Stephan Saalfeld
and 3 other authors
EASI-FISH for thick tissue defines lateral hypothalamus spatio-molecular organization
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C. Shan Xu ,
C. Shan Xu,
Michal Januszewski ,
Zhiyuan Lu ,
Shin-Ya Takemura ,
Kenneth J. Hayworth,
Gary B. Huang ,
Kazunori Shinomiya ,
Jeremy Maitlin-Shepard ,
Stuart Berg,
Jody Clements,
Philip M. Hubbard ,
William T. Katz ,
Lowell Umayam
and 94 other authors
A connectome and analysis of the adult Drosophila central brain
Download from cdn.elifesciences.org
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Shoh M. Asano ,
Srigokul Upadhyayula ,
Igor Pisarev ,
Daniel E. Milkie ,
Tsung-Li Liu ,
Ved Singh,
Austin Graves ,
Grace H. Huynh ,
Yongxin Zhao ,
John Bogovic ,
Jennifer Colonell,
Carolyn M. Ott,
Christopher Zugates ,
Susan Tappan
and 16 other authors
Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution
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Robert Brandt,
Sarah J. Butcher,
Lucy Collinson,
David Gault,
Kay Grünewald,
Corey Hecksel,
Juha T. Huiskonen,
Andrii Iudin,
Martin L. Jones ,
Paul K. Korir,
Abraham J. Koster,
Ingvar Lagerstedt ,
Catherine L. Lawson,
David Mastronarde
and 12 other authors
Building bridges between cellular and molecular structural biology
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Post-acquisition image based compensation for thickness variation in microscopy section series
Download from arxiv.org
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Pavel Tomancak
ImgLib2--generic image processing in Java
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Benjamin Schmid,
Jean-Yves Tinevez ,
Daniel James White,
Volker Eliceiri Kevin Hartenstein,
Kevin Eliceiri,
Pavel Tomanč́ak
and 2 other authors
Fiji: an open-source platform for biological-image analysis
Download from www.nature.com
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Stephan Saalfeld ,
Ignacio Arganda-Carreras,
Johannes Schindelin,
Stephan Preibisch,
Mark Longair,
Pavel Tomanč́ak,
Rodney J. Douglas,
Volker Hartenstein
TrakEM2 Software for Neural Circuit Reconstruction
Download from doi.org
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Richard Fetter,
Albert Cardona ,
Pavel Tomanč́ak
Elastic volume reconstruction from series of ultra-thin microscopy sections
Download from www.nature.com
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Albert Cardona ,
Volker Hartenstein,
Pavel Tomancak
As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets
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,
Johannes Schindelin,
Pavel Tomanč́ak
Software for bead-based registration of selective plane illumination microscopy data
Download from www.nature.com
Into ImgLib—Generic Image Processing in Java
Download from www.researchgate.net
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Stephan Saalfeld ,
Volker Hartenstein,
Pavel Tomancak
CATMAID: collaborative annotation toolkit for massive amounts of image data
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Pavel Tomancak
Globally optimal stitching of tiled 3D microscopic image acquisitions
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Torsten Rohlfing,
Pavel Tomanč́ak
Download from www.researchgate.net
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Stefan Saalfeld ,
P. Tomancak,
Volker Hartenstein
Download from symposium.cshlp.org
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