All papers authored by Francesco Asnicar
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2024
Aitor Blanco-Míguez 
,
Sara Carloni,
Cindy Cardenas,
Carola Conca Dioguardi,
Luca Lambroia ,
Giovanni Capretti,
Gennaro Nappo,
Alessandro Fugazza,
Antonio Capogreco,
Federica Armanini,
Francesco Asnicar ,
Leonard Dubois,
Davide Golzato,
Paolo Manghi ,
Federica Pinto
and 11 other authors
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,
Sara Carloni,
Cindy Cardenas,
Carola Conca Dioguardi,
Luca Lambroia ,
Giovanni Capretti,
Gennaro Nappo,
Alessandro Fugazza,
Antonio Capogreco,
Federica Armanini,
Francesco Asnicar ,
Leonard Dubois,
Davide Golzato,
Paolo Manghi ,
Federica Pinto
and 11 other authors
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Carolina Alves Costa Silva ,
Gianmarco Piccinno ,
Déborah Suissa,
Mélanie Bourgin ,
Gerty Schreibelt ,
Sylvère Durand,
Roxanne Birebent,
Marine Fidelle ,
Cissé Sow,
Fanny Aprahamian,
Paolo Manghi ,
Michal Punčochář ,
Francesco Asnicar ,
Federica Pinto,
Federica Armanini
and 10 other authors
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,
Gianmarco Piccinno ,
Déborah Suissa,
Mélanie Bourgin ,
Gerty Schreibelt ,
Sylvère Durand,
Roxanne Birebent,
Marine Fidelle ,
Cissé Sow,
Fanny Aprahamian,
Paolo Manghi ,
Michal Punčochář ,
Francesco Asnicar ,
Federica Pinto,
Federica Armanini
and 10 other authors
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Davide Bazzani,
Vitor Heidrich ,
Paolo Manghi ,
Aitor Blanco-Miguez ,
Francesco Asnicar ,
Federica Armanini,
Sara Cavaliere,
Alberto Bertelle,
Federico Dell’Acqua,
Ester Dellasega,
Romina Waldner,
Daniela Vicentini,
Mattia Bolzan ,
Cristiano Tomasi,
Nicola Segata
and 2 other authors
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,
Paolo Manghi ,
Aitor Blanco-Miguez ,
Francesco Asnicar ,
Federica Armanini,
Sara Cavaliere,
Alberto Bertelle,
Federico Dell’Acqua,
Ester Dellasega,
Romina Waldner,
Daniela Vicentini,
Mattia Bolzan ,
Cristiano Tomasi,
Nicola Segata
and 2 other authors
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Johannes R. Björk ,
Laura A. Bolte ,
Andrew Maltez Thomas ,
Karla A. Lee,
Niccolo Rossi,
Thijs T. Wind,
Lotte M. Smit,
Federica Armanini,
Francesco Asnicar ,
Aitor Blanco-Miguez ,
Ruth Board,
Neus Calbet-Llopart,
Lisa Derosa ,
Nathalie Dhomen ,
Kelly Brooks
and 25 other authors
,
Laura A. Bolte ,
Andrew Maltez Thomas ,
Karla A. Lee,
Niccolo Rossi,
Thijs T. Wind,
Lotte M. Smit,
Federica Armanini,
Francesco Asnicar ,
Aitor Blanco-Miguez ,
Ruth Board,
Neus Calbet-Llopart,
Lisa Derosa ,
Nathalie Dhomen ,
Kelly Brooks
and 25 other authors
Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma
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2023
Aitor Blanco-Míguez ,
Francesco Beghini ,
Fabio Cumbo ,
Lauren J. McIver,
Kelsey N. Thompson ,
Moreno Zolfo ,
Paolo Manghi ,
Leonard Dubois,
Kun D. Huang,
Andrew Maltez Thomas,
William A. Nickols ,
Gianmarco Piccinno ,
Elisa Piperni ,
Michal Punčochář,
Mireia Valles-Colomer
and 11 other authors
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,
Francesco Beghini ,
Fabio Cumbo ,
Lauren J. McIver,
Kelsey N. Thompson ,
Moreno Zolfo ,
Paolo Manghi ,
Leonard Dubois,
Kun D. Huang,
Andrew Maltez Thomas,
William A. Nickols ,
Gianmarco Piccinno ,
Elisa Piperni ,
Michal Punčochář,
Mireia Valles-Colomer
and 11 other authors
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Mireia Valles-Colomer ,
Aitor Blanco-Míguez ,
Paolo Manghi ,
Francesco Asnicar ,
Leonard Dubois,
Davide Golzato,
Federica Armanini,
Fabio Cumbo,
Kun D. Huang,
Serena Manara ,
Giulia Masetti,
Federica Pinto ,
Elisa Piperni,
Michal Punčochář,
Liviana Ricci
and 28 other authors
,
Aitor Blanco-Míguez ,
Paolo Manghi ,
Francesco Asnicar ,
Leonard Dubois,
Davide Golzato,
Federica Armanini,
Fabio Cumbo,
Kun D. Huang,
Serena Manara ,
Giulia Masetti,
Federica Pinto ,
Elisa Piperni,
Michal Punčochář,
Liviana Ricci
and 28 other authors
The person-to-person transmission landscape of the gut and oral microbiomes
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2022
Kate M. Bermingham ,
Inbar Linenberg,
Wendy L. Hall,
Kirstin Kadé,
Paul W. Franks,
Richard Davies ,
Jonathan Wolf,
George Hadjigeorgiou,
Francesco Asnicar ,
Nicola Segata,
JoAnn E. Manson,
Louise R. Newson ,
Linda M. Delahanty,
Jose M. Ordovas,
Andrew T. Chan
and 3 other authors
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,
Inbar Linenberg,
Wendy L. Hall,
Kirstin Kadé,
Paul W. Franks,
Richard Davies ,
Jonathan Wolf,
George Hadjigeorgiou,
Francesco Asnicar ,
Nicola Segata,
JoAnn E. Manson,
Louise R. Newson ,
Linda M. Delahanty,
Jose M. Ordovas,
Andrew T. Chan
and 3 other authors
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Matteo Ciciani,
Michele Demozzi ,
Eleonora Pedrazzoli ,
Elisabetta Visentin ,
Laura Pezzè,
Lorenzo Federico Signorini ,
Aitor Blanco-Miguez ,
Moreno Zolfo ,
Francesco Asnicar ,
Antonio Casini,
Anna Cereseto ,
Nicola Segata
,
Eleonora Pedrazzoli ,
Elisabetta Visentin ,
Laura Pezzè,
Lorenzo Federico Signorini ,
Aitor Blanco-Miguez ,
Moreno Zolfo ,
Francesco Asnicar ,
Antonio Casini,
Anna Cereseto ,
Nicola Segata
Automated identification of sequence-tailored Cas9 proteins using massive metagenomic data
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Gianluca Ianiro ,
Michal Punčochář,
Nicolai Karcher ,
Serena Porcari,
Federica Armanini,
Francesco Asnicar ,
Francesco Beghini ,
Aitor Blanco-Míguez ,
Fabio Cumbo,
Paolo Manghi ,
Federica Pinto ,
Luca Masucci,
Gianluca Quaranta,
Silvia De Giorgi ,
Giusi Desirè Sciumè
and 8 other authors
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,
Michal Punčochář,
Nicolai Karcher ,
Serena Porcari,
Federica Armanini,
Francesco Asnicar ,
Francesco Beghini ,
Aitor Blanco-Míguez ,
Fabio Cumbo,
Paolo Manghi ,
Federica Pinto ,
Luca Masucci,
Gianluca Quaranta,
Silvia De Giorgi ,
Giusi Desirè Sciumè
and 8 other authors
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Karla A. Lee,
Andrew Maltez Thomas,
Laura A. Bolte ,
Johannes R. Björk,
Laura Kist de Ruijter ,
Federica Armanini,
Francesco Asnicar ,
Aitor Blanco-Miguez ,
Ruth Board,
Neus Calbet-Llopart ,
Lisa Derosa,
Nathalie Dhomen,
Kelly Brooks,
Mark Harland,
Mark Harries
and 25 other authors
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,
Johannes R. Björk,
Laura Kist de Ruijter ,
Federica Armanini,
Francesco Asnicar ,
Aitor Blanco-Miguez ,
Ruth Board,
Neus Calbet-Llopart ,
Lisa Derosa,
Nathalie Dhomen,
Kelly Brooks,
Mark Harland,
Mark Harries
and 25 other authors
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2021
Alice Bertocchi ,
Sara Carloni ,
Paola Simona Ravenda ,
Giovanni Bertalot,
Ilaria Spadoni ,
Antonino Lo Cascio ,
Sara Gandini,
Michela Lizier ,
Daniele Braga ,
Francesco Asnicar ,
Nicola Segata ,
Chris Klaver,
Paola Brescia ,
Elio Rossi ,
Achille Anselmo
and 17 other authors
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,
Sara Carloni ,
Paola Simona Ravenda ,
Giovanni Bertalot,
Ilaria Spadoni ,
Antonino Lo Cascio ,
Sara Gandini,
Michela Lizier ,
Daniele Braga ,
Francesco Asnicar ,
Nicola Segata ,
Chris Klaver,
Paola Brescia ,
Elio Rossi ,
Achille Anselmo
and 17 other authors
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Gladys Ferrere ,
Maryam Tidjani Alou,
Peng Liu,
Anne-Gaëlle Goubet ,
Marine Fidelle ,
Oliver Kepp ,
Sylvère Durand ,
Valerio Iebba ,
Aurélie Fluckiger,
Romain Daillère,
Cassandra Thelemaque,
Claudia Grajeda-Iglesias ,
Carolina Alves Costa Silva ,
Fanny Aprahamian,
Déborah Lefevre
and 13 other authors
,
Maryam Tidjani Alou,
Peng Liu,
Anne-Gaëlle Goubet ,
Marine Fidelle ,
Oliver Kepp ,
Sylvère Durand ,
Valerio Iebba ,
Aurélie Fluckiger,
Romain Daillère,
Cassandra Thelemaque,
Claudia Grajeda-Iglesias ,
Carolina Alves Costa Silva ,
Fanny Aprahamian,
Déborah Lefevre
and 13 other authors
Ketogenic diet and ketone bodies enhance the anticancer effects of PD-1 blockade
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Francesco Asnicar ,
Sarah E. Berry ,
Ana M. Valdes ,
Long H. Nguyen ,
Gianmarco Piccinno ,
David A. Drew ,
Emily Leeming,
Rachel Gibson ,
Caroline Le Roy ,
Haya Al Khatib,
Lucy Francis ,
Mohsen Mazidi,
Olatz Mompeo,
Mireia Valles-Colomer ,
Adrian Tett
and 24 other authors
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,
Sarah E. Berry ,
Ana M. Valdes ,
Long H. Nguyen ,
Gianmarco Piccinno ,
David A. Drew ,
Emily Leeming,
Rachel Gibson ,
Caroline Le Roy ,
Haya Al Khatib,
Lucy Francis ,
Mohsen Mazidi,
Olatz Mompeo,
Mireia Valles-Colomer ,
Adrian Tett
and 24 other authors
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2020
Sarah E. Berry ,
Ana M. Valdes ,
David A. Drew ,
Francesco Asnicar ,
Mohsen Mazidi,
Jonathan Wolf ,
Joan Capdevila ,
George Hadjigeorgiou ,
Richard Davies ,
Haya Al Khatib ,
Christopher Bonnett ,
Sajaysurya Ganesh ,
Elco Bakker ,
Deborah Hart ,
Massimo Mangino
and 10 other authors
,
Ana M. Valdes ,
David A. Drew ,
Francesco Asnicar ,
Mohsen Mazidi,
Jonathan Wolf ,
Joan Capdevila ,
George Hadjigeorgiou ,
Richard Davies ,
Haya Al Khatib ,
Christopher Bonnett ,
Sajaysurya Ganesh ,
Elco Bakker ,
Deborah Hart ,
Massimo Mangino
and 10 other authors
Publisher Correction: Human postprandial responses to food and potential for precision nutrition
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Sarah E. Berry ,
Ana M. Valdes ,
David A. Drew ,
Francesco Asnicar ,
Mohsen Mazidi,
Jonathan Wolf ,
Joan Capdevila ,
George Hadjigeorgiou ,
Richard Davies ,
Haya Al Khatib ,
Christopher Bonnett ,
Sajaysurya Ganesh ,
Elco Bakker ,
Deborah Hart ,
Massimo Mangino
and 10 other authors
,
Ana M. Valdes ,
David A. Drew ,
Francesco Asnicar ,
Mohsen Mazidi,
Jonathan Wolf ,
Joan Capdevila ,
George Hadjigeorgiou ,
Richard Davies ,
Haya Al Khatib ,
Christopher Bonnett ,
Sajaysurya Ganesh ,
Elco Bakker ,
Deborah Hart ,
Massimo Mangino
and 10 other authors
Human postprandial responses to food and potential for precision nutrition
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Francesco Asnicar ,
Andrew Maltez Thomas ,
Francesco Beghini ,
Claudia Mengoni,
Serena Manara ,
Paolo Manghi ,
Qiyun Zhu,
Mattia Bolzan ,
Fabio Cumbo ,
Uyen May,
Jon G. Sanders ,
Moreno Zolfo ,
Evguenia Kopylova,
Edoardo Pasolli,
Rob Knight
and 3 other authors
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,
Andrew Maltez Thomas ,
Francesco Beghini ,
Claudia Mengoni,
Serena Manara ,
Paolo Manghi ,
Qiyun Zhu,
Mattia Bolzan ,
Fabio Cumbo ,
Uyen May,
Jon G. Sanders ,
Moreno Zolfo ,
Evguenia Kopylova,
Edoardo Pasolli,
Rob Knight
and 3 other authors
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Elena Zagato ,
Chiara Pozzi ,
Alice Bertocchi,
Tiziana Schioppa ,
Fabiana Saccheri,
Silvia Guglietta ,
Bruno Fosso ,
Laura Melocchi,
Giulia Nizzoli,
Jacopo Troisi ,
Marinella Marzano,
Bianca Oresta,
Ilaria Spadoni,
Koji Atarashi ,
Sara Carloni
and 10 other authors
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,
Chiara Pozzi ,
Alice Bertocchi,
Tiziana Schioppa ,
Fabiana Saccheri,
Silvia Guglietta ,
Bruno Fosso ,
Laura Melocchi,
Giulia Nizzoli,
Jacopo Troisi ,
Marinella Marzano,
Bianca Oresta,
Ilaria Spadoni,
Koji Atarashi ,
Sara Carloni
and 10 other authors
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2019
Qiyun Zhu ,
Uyen Mai,
Wayne Pfeiffer,
Stefan Janssen ,
Francesco Asnicar ,
Jon G. Sanders ,
Pedro Belda-Ferre ,
Gabriel A. Al-Ghalith ,
Evguenia Kopylova,
Daniel McDonald,
Tomasz Kosciolek ,
John B. Yin,
Shi Huang,
Nimaichand Salam,
Jian-Yu Jiao
and 15 other authors
,
Uyen Mai,
Wayne Pfeiffer,
Stefan Janssen ,
Francesco Asnicar ,
Jon G. Sanders ,
Pedro Belda-Ferre ,
Gabriel A. Al-Ghalith ,
Evguenia Kopylova,
Daniel McDonald,
Tomasz Kosciolek ,
John B. Yin,
Shi Huang,
Nimaichand Salam,
Jian-Yu Jiao
and 15 other authors
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea
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Moreno Zolfo ,
Federica Pinto ,
Francesco Asnicar ,
Paolo Manghi ,
Adrian Tett,
Frederic D. Bushman ,
Nicola Segata
,
Federica Pinto ,
Francesco Asnicar ,
Paolo Manghi ,
Adrian Tett,
Frederic D. Bushman ,
Nicola Segata
Detecting contamination in viromes using ViromeQC
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Yoshiki Vazquez-Baeza,
Nicholas A. Bokulich ,
Christian C. Abnet ,
Gabriel A. Al-Ghalith ,
Harriet Alexander,
Evan Bolyen ,
Eric J. Alm ,
Manimozhiyan Arumugam ,
Francesco Asnicar ,
Yang Bai ,
Jordan E. Bisanz ,
Kyle Bittinger,
Matthew R. Dillon ,
Asker Brejnrod,
Colin J. Brislawn
and 99 other authors
,
Christian C. Abnet ,
Gabriel A. Al-Ghalith ,
Harriet Alexander,
Evan Bolyen ,
Eric J. Alm ,
Manimozhiyan Arumugam ,
Francesco Asnicar ,
Yang Bai ,
Jordan E. Bisanz ,
Kyle Bittinger,
Matthew R. Dillon ,
Asker Brejnrod,
Colin J. Brislawn
and 99 other authors
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
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