All papers authored by Michael M. Hoffman
Refreshing results…
2024
Saumya Agrawal 
,
Andrey Buyan,
Jessica Severin,
Masaru Koido ,
Tanvir Alam ,
Imad Abugessaisa,
Howard Y. Chang,
Josée Dostie,
Masayoshi Itoh ,
Juha Kere ,
Naoto Kondo,
Yunjing Li,
Vsevolod J. Makeev ,
Mickaël Mendez ,
Yasushi Okazaki
and 14 other authors
,
Andrey Buyan,
Jessica Severin,
Masaru Koido ,
Tanvir Alam ,
Imad Abugessaisa,
Howard Y. Chang,
Josée Dostie,
Masayoshi Itoh ,
Juha Kere ,
Naoto Kondo,
Yunjing Li,
Vsevolod J. Makeev ,
Mickaël Mendez ,
Yasushi Okazaki
and 14 other authors
Annotation of nuclear lncRNAs based on chromatin interactions
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Gary S. Collins ,
Karel G. M. Moons ,
Paula Dhiman ,
Richard D. Riley ,
Andrew L. Beam ,
Ben Van Calster ,
Marzyeh Ghassemi ,
Xiaoxuan Liu ,
Johannes B. Reitsma ,
Maarten van Smeden ,
Anne-Laure Boulesteix ,
Jennifer Catherine Camaradou ,
Leo Anthony Celi ,
Spiros Denaxas ,
Alastair K. Denniston
and 19 other authors
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,
Karel G. M. Moons ,
Paula Dhiman ,
Richard D. Riley ,
Andrew L. Beam ,
Ben Van Calster ,
Marzyeh Ghassemi ,
Xiaoxuan Liu ,
Johannes B. Reitsma ,
Maarten van Smeden ,
Anne-Laure Boulesteix ,
Jennifer Catherine Camaradou ,
Leo Anthony Celi ,
Spiros Denaxas ,
Alastair K. Denniston
and 19 other authors
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Maarten van Smeden,
Bram van Ginneken,
Annika Reinke ,
Gaël Varoquaux ,
Manuel Wiesenfarth,
Ziv R. Yaniv ,
Minu Dietlinde Tizabi ,
Michael Baumgartner ,
Matthias Eisenmann,
Doreen Heckmann-Nötzel,
A. Emre Kavur,
Ali Emre Kavur ,
Tim Rädsch ,
Carole H. Sudre,
Laura Acion
and 70 other authors
,
Gaël Varoquaux ,
Manuel Wiesenfarth,
Ziv R. Yaniv ,
Minu Dietlinde Tizabi ,
Michael Baumgartner ,
Matthias Eisenmann,
Doreen Heckmann-Nötzel,
A. Emre Kavur,
Ali Emre Kavur ,
Tim Rädsch ,
Carole H. Sudre,
Laura Acion
and 70 other authors
Understanding metric-related pitfalls in image analysis validation
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Lena Maier-Hein ,
Annika Reinke ,
Patrick Godau ,
Minu D. Tizabi,
Florian Buettner,
Evangelia Christodoulou,
Ben Glocker ,
Fabian Isensee,
Jens Kleesiek,
Michal Kozubek ,
Mauricio Reyes,
Michael A. Riegler ,
Manuel Wiesenfarth,
A. Emre Kavur,
A. Emre Kavur
and 62 other authors
,
Annika Reinke ,
Patrick Godau ,
Minu D. Tizabi,
Florian Buettner,
Evangelia Christodoulou,
Ben Glocker ,
Fabian Isensee,
Jens Kleesiek,
Michal Kozubek ,
Mauricio Reyes,
Michael A. Riegler ,
Manuel Wiesenfarth,
A. Emre Kavur,
A. Emre Kavur
and 62 other authors
Metrics reloaded: recommendations for image analysis validation
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2021
Heidi L. Rehm ,
Angela J. H. Page ,
Lindsay Smith ,
Jeremy B. Adams ,
Gil Alterovitz,
Lawrence J. Babb ,
Maxmillian P. Barkley,
Michael Baudis ,
Michael J. S. Beauvais ,
Tim Beck ,
Jacques S. Beckmann ,
Sergi Beltran ,
David Bernick,
Alexander Bernier,
James K. Bonfield
and 187 other authors
,
Angela J. H. Page ,
Lindsay Smith ,
Jeremy B. Adams ,
Gil Alterovitz,
Lawrence J. Babb ,
Maxmillian P. Barkley,
Michael Baudis ,
Michael J. S. Beauvais ,
Tim Beck ,
Jacques S. Beckmann ,
Sergi Beltran ,
David Bernick,
Alexander Bernier,
James K. Bonfield
and 187 other authors
GA4GH: International policies and standards for data sharing across genomic research and healthcare
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2020
Jordan A. Ramilowski ,
Chi Wai Yip,
Saumya Agrawal,
Jen-Chien Chang,
Yari Ciani ,
Ivan V. Kulakovskiy,
Mickaël Mendez,
Jasmine Li Ching Ooi,
John F. Ouyang,
Nick Parkinson,
Andreas Petri,
Leonie Roos,
Jessica Severin,
Kayoko Yasuzawa,
Imad Abugessaisa
and 101 other authors
,
Chi Wai Yip,
Saumya Agrawal,
Jen-Chien Chang,
Yari Ciani ,
Ivan V. Kulakovskiy,
Mickaël Mendez,
Jasmine Li Ching Ooi,
John F. Ouyang,
Nick Parkinson,
Andreas Petri,
Leonie Roos,
Jessica Severin,
Kayoko Yasuzawa,
Imad Abugessaisa
and 101 other authors
Functional annotation of human long noncoding RNAs via molecular phenotyping
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2016
Eric G. Roberts ,
Mickaël Mendez ,
Coby Viner ,
Mehran Karimzadeh ,
Rachel C. W. Chan ,
Rachel Ancar ,
Davide Chicco ,
Jay R. Hesselberth,
Anshul Kundaje ,
Michael M. Hoffman
,
Mickaël Mendez ,
Coby Viner ,
Mehran Karimzadeh ,
Rachel C. W. Chan ,
Rachel Ancar ,
Davide Chicco ,
Jay R. Hesselberth,
Anshul Kundaje ,
Michael M. Hoffman
Semi-automated genome annotation using epigenomic data and Segway
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Ankur Jai Sood ,
Coby Viner ,
Michael M. Hoffman
,
Coby Viner ,
Michael M. Hoffman
DNAmod: the DNA modification database
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