All papers authored by Anshul Kundaje
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2023
Caleb A. Lareau 
,
Yajie Yin ,
Katie Maurer ,
Katalin D. Sandor ,
Bence Daniel ,
Garima Yagnik,
José Peña ,
Jeremy Chase Crawford ,
Anne M. Spanjaart ,
Jacob C. Gutierrez,
Nicholas J. Haradhvala ,
Janice M. Riberdy,
Tsion Abay ,
Robert R. Stickels ,
Jeffrey M. Verboon
and 25 other authors
,
Yajie Yin ,
Katie Maurer ,
Katalin D. Sandor ,
Bence Daniel ,
Garima Yagnik,
José Peña ,
Jeremy Chase Crawford ,
Anne M. Spanjaart ,
Jacob C. Gutierrez,
Nicholas J. Haradhvala ,
Janice M. Riberdy,
Tsion Abay ,
Robert R. Stickels ,
Jeffrey M. Verboon
and 25 other authors
Latent human herpesvirus 6 is reactivated in CAR T cells
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Niki Dimou ,
Andre E. Kim,
Orlagh Flanagan,
Neil Murphy ,
Virginia Diez-Obrero,
Anna Shcherbina,
Elom K. Aglago ,
Emmanouil Bouras ,
Peter T. Campbell,
Graham Casey,
Steven Gallinger,
Stephen B. Gruber,
Mark A. Jenkins,
Yi Lin,
Victor Moreno
and 73 other authors
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,
Andre E. Kim,
Orlagh Flanagan,
Neil Murphy ,
Virginia Diez-Obrero,
Anna Shcherbina,
Elom K. Aglago ,
Emmanouil Bouras ,
Peter T. Campbell,
Graham Casey,
Steven Gallinger,
Stephen B. Gruber,
Mark A. Jenkins,
Yi Lin,
Victor Moreno
and 73 other authors
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Elom K. Aglago ,
Andre Kim ,
Yi Lin ,
Conghui Qu ,
Marina Evangelou ,
Yu Ren ,
John Morrison ,
Demetrius Albanes ,
Volker Arndt ,
Elizabeth L. Barry ,
James W. Baurley ,
Sonja I. Berndt ,
Stephanie A. Bien ,
D. Timothy Bishop ,
Emmanouil Bouras
and 85 other authors
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,
Andre Kim ,
Yi Lin ,
Conghui Qu ,
Marina Evangelou ,
Yu Ren ,
John Morrison ,
Demetrius Albanes ,
Volker Arndt ,
Elizabeth L. Barry ,
James W. Baurley ,
Sonja I. Berndt ,
Stephanie A. Bien ,
D. Timothy Bishop ,
Emmanouil Bouras
and 85 other authors
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2022
Robert Carreras-Torres ,
Andre E. Kim ,
Yi Lin ,
Virginia Díez-Obrero ,
Stephanie A. Bien ,
Conghui Qu ,
Jun Wang ,
Niki Dimou ,
Elom K. Aglago ,
Demetrius Albanes ,
Volker Arndt ,
James W. Baurley ,
Sonja I. Berndt ,
Stéphane Bézieau ,
D. Timothy Bishop
and 74 other authors
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,
Andre E. Kim ,
Yi Lin ,
Virginia Díez-Obrero ,
Stephanie A. Bien ,
Conghui Qu ,
Jun Wang ,
Niki Dimou ,
Elom K. Aglago ,
Demetrius Albanes ,
Volker Arndt ,
James W. Baurley ,
Sonja I. Berndt ,
Stéphane Bézieau ,
D. Timothy Bishop
and 74 other authors
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Winston R. Becker ,
Stephanie A. Nevins,
Derek C. Chen ,
Roxanne Chiu,
Aaron M. Horning ,
Tuhin K. Guha,
Rozelle Laquindanum,
Meredith Mills,
Hassan Chaib,
Uri Ladabaum,
Teri Longacre,
Jeanne Shen ,
Edward D. Esplin ,
Anshul Kundaje ,
James M. Ford
and 3 other authors
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,
Stephanie A. Nevins,
Derek C. Chen ,
Roxanne Chiu,
Aaron M. Horning ,
Tuhin K. Guha,
Rozelle Laquindanum,
Meredith Mills,
Hassan Chaib,
Uri Ladabaum,
Teri Longacre,
Jeanne Shen ,
Edward D. Esplin ,
Anshul Kundaje ,
James M. Ford
and 3 other authors
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Adam W. Turner,
Shengen Shawn Hu ,
Jose Verdezoto Mosquera ,
Wei Feng Ma,
Chani J. Hodonsky ,
Doris Wong,
Gaëlle Auguste ,
Yipei Song,
Katia Sol-Church,
Emily Farber,
Soumya Kundu,
Anshul Kundaje ,
Nicolas G. Lopez,
Lijiang Ma,
Saikat Kumar B. Ghosh
and 9 other authors
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,
Jose Verdezoto Mosquera ,
Wei Feng Ma,
Chani J. Hodonsky ,
Doris Wong,
Gaëlle Auguste ,
Yipei Song,
Katia Sol-Church,
Emily Farber,
Soumya Kundu,
Anshul Kundaje ,
Nicolas G. Lopez,
Lijiang Ma,
Saikat Kumar B. Ghosh
and 9 other authors
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Yu Tian ,
Andre E. Kim ,
Stephanie A. Bien,
Yi Lin,
Conghui Qu,
Tabitha A. Harrison,
Robert Carreras-Torres ,
Virginia Díez-Obrero,
Niki Dimou,
David A. Drew ,
Akihisa Hidaka,
Jeroen R. Huyghe ,
Kristina M. Jordahl ,
John Morrison,
Neil Murphy
and 62 other authors
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,
Andre E. Kim ,
Stephanie A. Bien,
Yi Lin,
Conghui Qu,
Tabitha A. Harrison,
Robert Carreras-Torres ,
Virginia Díez-Obrero,
Niki Dimou,
David A. Drew ,
Akihisa Hidaka,
Jeroen R. Huyghe ,
Kristina M. Jordahl ,
John Morrison,
Neil Murphy
and 62 other authors
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Leif S. Ludwig ,
Caleb A. Lareau ,
Erik L. Bao,
Nan Liu ,
Taiju Utsugisawa,
Alex M. Tseng,
Samuel A. Myers ,
Jeffrey M. Verboon ,
Jacob C. Ulirsch,
Wendy Luo,
Christoph Muus,
Claudia Fiorini,
Meagan E. Olive ,
Christopher M. Vockley,
Mathias Munschauer
and 17 other authors
,
Caleb A. Lareau ,
Erik L. Bao,
Nan Liu ,
Taiju Utsugisawa,
Alex M. Tseng,
Samuel A. Myers ,
Jeffrey M. Verboon ,
Jacob C. Ulirsch,
Wendy Luo,
Christoph Muus,
Claudia Fiorini,
Meagan E. Olive ,
Christopher M. Vockley,
Mathias Munschauer
and 17 other authors
Congenital anemia reveals distinct targeting mechanisms for master transcription factor GATA1
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Kristina M. Jordahl ,
Anna Shcherbina ,
Andre E. Kim,
Yu-Ru Su,
Yi Lin,
Jun Wang,
Conghui Qu,
Demetrius Albanes,
Volker Arndt ,
James W. Baurley,
Sonja I. Berndt,
Stephanie A. Bien ,
D. Timothy Bishop ,
Emmanouil Bouras ,
Hermann Brenner
and 79 other authors
Upload
,
Anna Shcherbina ,
Andre E. Kim,
Yu-Ru Su,
Yi Lin,
Jun Wang,
Conghui Qu,
Demetrius Albanes,
Volker Arndt ,
James W. Baurley,
Sonja I. Berndt,
Stephanie A. Bien ,
D. Timothy Bishop ,
Emmanouil Bouras ,
Hermann Brenner
and 79 other authors
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2021
Alexandro E. Trevino,
Fabian Müller ,
Jimena Andersen,
Laksshman Sundaram ,
Arwa Kathiria,
Anna Shcherbina ,
Kyle Farh,
Howard Y. Chang,
Anca M. Pașca,
Anshul Kundaje ,
Sergiu P. Pașca,
William J. Greenleaf
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,
Jimena Andersen,
Laksshman Sundaram ,
Arwa Kathiria,
Anna Shcherbina ,
Kyle Farh,
Howard Y. Chang,
Anca M. Pașca,
Anshul Kundaje ,
Sergiu P. Pașca,
William J. Greenleaf
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Xin Liu ,
Tao Sun,
Anna Shcherbina,
Qin Li ,
Inga Jarmoskaite ,
Kalli Kappel ,
Gokul Ramaswami,
Rhiju Das ,
Anshul Kundaje ,
Jin Billy Li
,
Tao Sun,
Anna Shcherbina,
Qin Li ,
Inga Jarmoskaite ,
Kalli Kappel ,
Gokul Ramaswami,
Rhiju Das ,
Anshul Kundaje ,
Jin Billy Li
Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis
Download from doi.org
Joseph Nasser,
Drew T. Bergman ,
Charles P. Fulco,
Philine Guckelberger ,
Benjamin R. Doughty,
Tejal A. Patwardhan,
Thouis R. Jones,
Tung H. Nguyen,
Jacob C. Ulirsch ,
Fritz Lekschas ,
Kristy Mualim,
Heini M. Natri,
Elle M. Weeks ,
Glen Munson,
Michael Kane
and 17 other authors
,
Charles P. Fulco,
Philine Guckelberger ,
Benjamin R. Doughty,
Tejal A. Patwardhan,
Thouis R. Jones,
Tung H. Nguyen,
Jacob C. Ulirsch ,
Fritz Lekschas ,
Kristy Mualim,
Heini M. Natri,
Elle M. Weeks ,
Glen Munson,
Michael Kane
and 17 other authors
Genome-wide enhancer maps link risk variants to disease genes
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2020
M. Ryan Corces ,
Anna Shcherbina,
Soumya Kundu,
Michael J. Gloudemans ,
Laure Frésard,
Jeffrey M. Granja,
Bryan H. Louie,
Tiffany Eulalio ,
Shadi Shams,
S. Tansu Bagdatli,
Maxwell R. Mumbach,
Boxiang Liu ,
Kathleen S. Montine,
William J. Greenleaf ,
Anshul Kundaje
and 3 other authors
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,
Anna Shcherbina,
Soumya Kundu,
Michael J. Gloudemans ,
Laure Frésard,
Jeffrey M. Granja,
Bryan H. Louie,
Tiffany Eulalio ,
Shadi Shams,
S. Tansu Bagdatli,
Maxwell R. Mumbach,
Boxiang Liu ,
Kathleen S. Montine,
William J. Greenleaf ,
Anshul Kundaje
and 3 other authors
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2018
Shaliu Fu ,
Qin Wang ,
Jill E. Moore,
Michael J. Purcaro,
Henry E. Pratt ,
Kaili Fan,
Cuihua Gu,
Cizhong Jiang ,
Ruixin Zhu,
Anshul Kundaje ,
Aiping Lu,
Zhiping Weng
Download from doi.org
,
Qin Wang ,
Jill E. Moore,
Michael J. Purcaro,
Henry E. Pratt ,
Kaili Fan,
Cuihua Gu,
Cizhong Jiang ,
Ruixin Zhu,
Anshul Kundaje ,
Aiping Lu,
Zhiping Weng
Download from doi.org
2017
Travers Ching ,
Daniel S. Himmelstein ,
Brett K. Beaulieu-Jones ,
Alexandr A. Kalinin ,
Brian T. Do ,
Himmelstein Ds,
Gregory P. Way ,
Beaulieu Jones Bk,
Kalinin Aa,
Enrico Ferrero ,
Michael M. Hoffman ,
Paul-Michael Agapow ,
Do Bt,
Gail L. Rosen ,
Benjamin J. Lengerich
and 30 other authors
,
Daniel S. Himmelstein ,
Brett K. Beaulieu-Jones ,
Alexandr A. Kalinin ,
Brian T. Do ,
Himmelstein Ds,
Gregory P. Way ,
Beaulieu Jones Bk,
Kalinin Aa,
Enrico Ferrero ,
Michael M. Hoffman ,
Paul-Michael Agapow ,
Do Bt,
Gail L. Rosen ,
Benjamin J. Lengerich
and 30 other authors
Opportunities And Obstacles For Deep Learning In Biology And Medicine
Download from www.biorxiv.org
M. Ryan Corces,
Jason D. Buenrostro,
Beijing Wu,
Peyton G. Greenside,
Steven M. Chan,
Julie L. Koenig,
Michael P. Snyder,
Jonathan K. Pritchard,
Anshul Kundaje ,
William J. Greenleaf,
Ravindra Majeti ,
Howard Y. Chang
Download from www.nature.com
,
William J. Greenleaf,
Ravindra Majeti ,
Howard Y. Chang
Download from www.nature.com
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