All papers authored by Manolis Kellis
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2024
Mitchell H. Murdock,
Cheng-Yi Yang,
Na Sun,
Ping-Chieh Pao 
,
Cristina Blanco-Duque,
Martin C. Kahn,
TaeHyun Kim,
Nicolas S. Lavoie,
Matheus B. Victor,
Md Rezaul Islam,
Fabiola Galiana ,
Noelle Leary,
Sidney Wang,
Adele Bubnys,
Emily Ma
and 10 other authors
,
Cristina Blanco-Duque,
Martin C. Kahn,
TaeHyun Kim,
Nicolas S. Lavoie,
Matheus B. Victor,
Md Rezaul Islam,
Fabiola Galiana ,
Noelle Leary,
Sidney Wang,
Adele Bubnys,
Emily Ma
and 10 other authors
Multisensory gamma stimulation promotes glymphatic clearance of amyloid
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2023
Na Sun,
Leyla Anne Akay ,
Mitchell H. Murdock,
Yongjin Park,
Fabiola Galiana-Melendez,
Adele Bubnys,
Kyriaki Galani,
Hansruedi Mathys,
Xueqiao Jiang,
Ayesha P. Ng ,
David A. Bennett,
Li-Huei Tsai ,
Manolis Kellis
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,
Mitchell H. Murdock,
Yongjin Park,
Fabiola Galiana-Melendez,
Adele Bubnys,
Kyriaki Galani,
Hansruedi Mathys,
Xueqiao Jiang,
Ayesha P. Ng ,
David A. Bennett,
Li-Huei Tsai ,
Manolis Kellis
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Na Sun,
Leyla Anne Akay ,
Mitchell H. Murdock,
Yongjin Park,
Fabiola Galiana-Melendez ,
Adele Bubnys,
Kyriaki Galani,
Hansruedi Mathys,
Xueqiao Jiang,
Ayesha P. Ng ,
David A. Bennett,
Li-Huei Tsai ,
Manolis Kellis
,
Mitchell H. Murdock,
Yongjin Park,
Fabiola Galiana-Melendez ,
Adele Bubnys,
Kyriaki Galani,
Hansruedi Mathys,
Xueqiao Jiang,
Ayesha P. Ng ,
David A. Bennett,
Li-Huei Tsai ,
Manolis Kellis
Single-nucleus multiregion transcriptomic analysis of brain vasculature in Alzheimer’s disease
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Wen-Chin Huang ,
Zhuyu Peng ,
Mitchell H. Murdock ,
Liwang Liu ,
Hansruedi Mathys ,
Jose Davila-Velderrain ,
Xueqiao Jiang ,
Maggie Chen ,
Ayesha P. Ng ,
TaeHyun Kim ,
Fatema Abdurrob ,
Fan Gao ,
David A. Bennett ,
Manolis Kellis ,
Li-Huei Tsai
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,
Zhuyu Peng ,
Mitchell H. Murdock ,
Liwang Liu ,
Hansruedi Mathys ,
Jose Davila-Velderrain ,
Xueqiao Jiang ,
Maggie Chen ,
Ayesha P. Ng ,
TaeHyun Kim ,
Fatema Abdurrob ,
Fan Gao ,
David A. Bennett ,
Manolis Kellis ,
Li-Huei Tsai
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2022
Joel W. Blanchard,
Leyla Anne Akay ,
Jose Davila-Velderrain ,
Djuna von Maydell,
Hansruedi Mathys,
Shawn M. Davidson ,
Audrey Effenberger ,
Chih-Yu Chen,
Kristal Maner-Smith,
Ihab Hajjar,
Eric A. Ortlund ,
Michael Bula,
Emre Agbas,
Ayesha Ng,
Xueqiao Jiang
and 13 other authors
,
Jose Davila-Velderrain ,
Djuna von Maydell,
Hansruedi Mathys,
Shawn M. Davidson ,
Audrey Effenberger ,
Chih-Yu Chen,
Kristal Maner-Smith,
Ihab Hajjar,
Eric A. Ortlund ,
Michael Bula,
Emre Agbas,
Ayesha Ng,
Xueqiao Jiang
and 13 other authors
APOE4 impairs myelination via cholesterol dysregulation in oligodendrocytes
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2021
Lucy G. Thorne ,
Mehdi Bouhaddou,
Ann-Kathrin Reuschl,
Lorena Zuliani-Alvarez,
Ben Polacco ,
Adrian Pelin,
Jyoti Batra,
Matthew V. X. Whelan,
Myra Hosmillo,
Andrea Fossati ,
Roberta Ragazzini ,
Irwin Jungreis ,
Manisha Ummadi,
Ajda Rojc,
Jane Turner
and 28 other authors
,
Mehdi Bouhaddou,
Ann-Kathrin Reuschl,
Lorena Zuliani-Alvarez,
Ben Polacco ,
Adrian Pelin,
Jyoti Batra,
Matthew V. X. Whelan,
Myra Hosmillo,
Andrea Fossati ,
Roberta Ragazzini ,
Irwin Jungreis ,
Manisha Ummadi,
Ajda Rojc,
Jane Turner
and 28 other authors
Evolution of enhanced innate immune evasion by SARS-CoV-2
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Scarlett J. Barker ,
Ravikiran M. Raju ,
Noah E. P. Milman ,
Jun Wang,
Jose Davila-Velderrain ,
Fatima Gunter-Rahman ,
Cameron C. Parro,
P. Lorenzo Bozzelli ,
P. Lorenzo Bozzelli,
Fatema Abdurrob ,
Karim Abdelaal ,
David A. Bennett ,
Manolis Kellis ,
Li-Huei Tsai
,
Ravikiran M. Raju ,
Noah E. P. Milman ,
Jun Wang,
Jose Davila-Velderrain ,
Fatima Gunter-Rahman ,
Cameron C. Parro,
P. Lorenzo Bozzelli ,
P. Lorenzo Bozzelli,
Fatema Abdurrob ,
Karim Abdelaal ,
David A. Bennett ,
Manolis Kellis ,
Li-Huei Tsai
MEF2 is a key regulator of cognitive potential and confers resilience to neurodegeneration
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Tamara Ouspenskaia ,
Travis Law ,
Karl R. Clauser,
Susan Klaeger ,
Siranush Sarkizova,
François Aguet ,
Bo Li ,
Elena Christian ,
Binyamin A. Knisbacher ,
Phuong M. Le,
Christina R. Hartigan,
Hasmik Keshishian,
Annie Apffel ,
Giacomo Oliveira ,
Wandi Zhang
and 14 other authors
,
Travis Law ,
Karl R. Clauser,
Susan Klaeger ,
Siranush Sarkizova,
François Aguet ,
Bo Li ,
Elena Christian ,
Binyamin A. Knisbacher ,
Phuong M. Le,
Christina R. Hartigan,
Hasmik Keshishian,
Annie Apffel ,
Giacomo Oliveira ,
Wandi Zhang
and 14 other authors
Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer
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Jicong Cao ,
Eva Maria Novoa ,
Zhizhuo Zhang,
William C. W. Chen,
Dianbo Liu,
Gigi C. G. Choi,
Alan S. L. Wong,
Claudia Wehrspaun,
Manolis Kellis ,
Timothy K. Lu
,
Eva Maria Novoa ,
Zhizhuo Zhang,
William C. W. Chen,
Dianbo Liu,
Gigi C. G. Choi,
Alan S. L. Wong,
Claudia Wehrspaun,
Manolis Kellis ,
Timothy K. Lu
High-throughput 5′ UTR engineering for enhanced protein production in non-viral gene therapies
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David Liu,
Jia-Ren Lin ,
Emily J. Robitschek,
Gyulnara G. Kasumova,
Alvin Shi,
Adam Kraya,
Gao Zhang,
Tabea Moll,
Shu Wang ,
Denis Schapiro ,
Avinash Sahu,
Shaolin Mei,
Benchun Miao,
Tatyana Sharova,
Jackson H. Stocking
and 25 other authors
,
Emily J. Robitschek,
Gyulnara G. Kasumova,
Alvin Shi,
Adam Kraya,
Gao Zhang,
Tabea Moll,
Shu Wang ,
Denis Schapiro ,
Avinash Sahu,
Shaolin Mei,
Benchun Miao,
Tatyana Sharova,
Jackson H. Stocking
and 25 other authors
Evolution of delayed resistance to immunotherapy in a melanoma responder
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Grzegorz Sienski ,
Priyanka Narayan ,
Julia Maeve Bonner ,
Nora Kory ,
Sebastian Boland ,
Aleksandra A. Arczewska,
William T. Ralvenius ,
Leyla Akay ,
Elana Lockshin ,
Liang He,
Blerta Milo,
Agnese Graziosi ,
Valeriya Baru ,
Caroline A. Lewis ,
Manolis Kellis
and 3 other authors
,
Priyanka Narayan ,
Julia Maeve Bonner ,
Nora Kory ,
Sebastian Boland ,
Aleksandra A. Arczewska,
William T. Ralvenius ,
Leyla Akay ,
Elana Lockshin ,
Liang He,
Blerta Milo,
Agnese Graziosi ,
Valeriya Baru ,
Caroline A. Lewis ,
Manolis Kellis
and 3 other authors
APOE4disrupts intracellular lipid homeostasis in human iPSC-derived glia
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Carles A. Boix ,
Benjamin T. James ,
Yongjin P. Park,
Wouter Meuleman ,
Manolis Kellis
,
Benjamin T. James ,
Yongjin P. Park,
Wouter Meuleman ,
Manolis Kellis
Regulatory genomic circuitry of human disease loci by integrative epigenomics
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Noella Lopes,
Claire McIntyre ,
Stefania Martin,
Mathilde Raverdeau ,
Nital Sumaria,
Ayano C. Kohlgruber ,
Gina J. Fiala ,
Leandro Z. Agudelo,
Lydia Dyck,
Harry Kane,
Aaron Douglas,
Stephen Cunningham,
Hannah Prendeville ,
Roisin Loftus,
Colleen Carmody
and 7 other authors
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,
Stefania Martin,
Mathilde Raverdeau ,
Nital Sumaria,
Ayano C. Kohlgruber ,
Gina J. Fiala ,
Leandro Z. Agudelo,
Lydia Dyck,
Harry Kane,
Aaron Douglas,
Stephen Cunningham,
Hannah Prendeville ,
Roisin Loftus,
Colleen Carmody
and 7 other authors
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2020
Shahin Mohammadi ,
Jose Davila-Velderrain ,
Manolis Kellis
,
Jose Davila-Velderrain ,
Manolis Kellis
A multiresolution framework to characterize single-cell state landscapes
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Asaf Marco ,
Hiruy S. Meharena,
Vishnu Dileep,
Ravikiran M. Raju,
Jose Davila-Velderrain ,
Amy Letao Zhang ,
Chinnakkaruppan Adaikkan,
Jennie Z. Young,
Fan Gao,
Manolis Kellis ,
Li-Huei Tsai
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,
Hiruy S. Meharena,
Vishnu Dileep,
Ravikiran M. Raju,
Jose Davila-Velderrain ,
Amy Letao Zhang ,
Chinnakkaruppan Adaikkan,
Jennie Z. Young,
Fan Gao,
Manolis Kellis ,
Li-Huei Tsai
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Joel W. Blanchard,
Michael Bula,
Jose Davila-Velderrain ,
Leyla Anne Akay ,
Lena Zhu,
Alexander Frank ,
Matheus B. Victor,
Julia Maeve Bonner,
Hansruedi Mathys,
Yuan-Ta Lin,
Tak Ko,
David A. Bennett,
Hugh P. Cam,
Manolis Kellis ,
Li-Huei Tsai
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,
Leyla Anne Akay ,
Lena Zhu,
Alexander Frank ,
Matheus B. Victor,
Julia Maeve Bonner,
Hansruedi Mathys,
Yuan-Ta Lin,
Tak Ko,
David A. Bennett,
Hugh P. Cam,
Manolis Kellis ,
Li-Huei Tsai
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Yue Li ,
Pratheeksha Nair,
Xing Han Lu,
Zhi Wen,
Yuening Wang,
Amir Ardalan Kalantari Dehaghi,
Yan Miao,
Weiqi Liu,
Tamas Ordog ,
Joanna M. Biernacka ,
Euijung Ryu,
Janet E. Olson ,
Mark A. Frye,
Aihua Liu,
Liming Guo
and 4 other authors
,
Pratheeksha Nair,
Xing Han Lu,
Zhi Wen,
Yuening Wang,
Amir Ardalan Kalantari Dehaghi,
Yan Miao,
Weiqi Liu,
Tamas Ordog ,
Joanna M. Biernacka ,
Euijung Ryu,
Janet E. Olson ,
Mark A. Frye,
Aihua Liu,
Liming Guo
and 4 other authors
Inferring multimodal latent topics from electronic health records
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