Julian Parkhill - Dissemin

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Papers authored by Julian Parkhill

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2016 Chrispin Chaguza

ORCID

, Cheryl P. Andam, Simon R. Harris, Jennifer E. Cornick, Marie Yang, Laura Bricio-Moreno

ORCID

, Arox W. Kamng’ona

ORCID

, Julian Parkhill

ORCID

, Neil French, Robert S. Heyderman, Aras Kadioglu

ORCID

, Dean B. Everett, Stephen D. Bentley, William P. Hanage

Recombination in Streptococcus pneumoniae Lineages Increase with Carriage Duration and Size of the Polysaccharide Capsule

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Koji Yahara, Guillaume Méric, Aidan J. Taylor, Stefan Pw W. de Vries

ORCID

, Taylor Aj, de Vries Sp, Susan Murray, Ben Pascoe

ORCID

, Leonardos Mageiros, Alicia Torralbo, Ana Vidal, Anne M. Ridley, Sho Komukai, Helen Wimalarathna, Alison J. Cody and 17 other authors

Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork

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Sophia David, Massimo Mentasti

ORCID

, Rediat Tewolde, Martin Aslett, Simon R. Harris, Baharak Afshar, Anthony Underwood, Norman K. Fry

ORCID

, Julian Parkhill

ORCID

, Timothy G. Harrison

Evaluation of an Optimal Epidemiological Typing Scheme for Legionella pneumophila with Whole-Genome Sequence Data Using Validation Guidelines

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2015 Kate S. Baker

ORCID

, Julian Parkhill

ORCID

, Nicholas R. Thomson

Draft Genome Sequence of 24570, the Type Strain of Shigella flexneri

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Lucy A. Weinert, Roy R. Chaudhuri, Jinhong Wang, Sarah E. Peters, Jukka Corander, Thibaut Jombart, Abiyad Baig, Kate J. Howell, Minna Vehkala, Niko Välimäki, David Harris, Tran Thi Bich Chieu, Nguyen Van Vinh Chau, James Campbell, Constance Schultsz and 17 other authors

Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis

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2014 Muhammad Ali Shah, Ankur Mutreja, Nicholas Thomson, Stephen Baker, Julian Parkhill

ORCID

, Gordon Dougan, Habib Bokhari, Brendan W. Wren

Genomic Epidemiology ofVibrio choleraeO1 Associated with Floods, Pakistan, 2010

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2013 Stefan Bereswill, Philip Cooper, Alan W. Walker

ORCID

, Jorge Reyes, Martha Chico, Susannah J. Salter, Maritza Vaca, Julian Parkhill

ORCID

Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota

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Sofia B. Pinto, Kirsty Stainton, Simon Harris, Zakaria Kambris, Elizabeth R. Sutton, Michael B. Bonsall, Julian Parkhill

ORCID

, Steven P. Sinkins

Transcriptional Regulation of Culex pipiens Mosquitoes by Wolbachia Influences Cytoplasmic Incompatibility

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Nicholas J. Croucher

ORCID

, Andrea M. Mitchell, Katherine A. Gould, Donald Inverarity, Lars Barquist

ORCID

, Theresa Feltwell, Maria C. Fookes, Simon R. Harris, Janina Dordel, Susannah J. Salter, Sarah Browall, Helena Zemlickova, Julian Parkhill

ORCID

, Staffan Normark, Birgitta Henriques-Normark and 3 other authors

Dominant Role of Nucleotide Substitution in the Diversification of Serotype 3 Pneumococci over Decades and during a Single Infection

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Jay Lucidarme, Jamie Findlow, Hannah Chan, Ian M. Feavers, Stephen J. Gray, Edward B. Kaczmarski, Julian Parkhill

ORCID

, Xilian Bai, Ray Borrow, Christopher D. Bayliss

The Distribution and ‘In Vivo’ Phase Variation Status of Haemoglobin Receptors in Invasive Meningococcal Serogroup B Disease: Genotypic and Phenotypic Analysis

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Kathryn E. Holt

ORCID

, Tran Vu Thieu Nga, Tran Vu Thieu Nga, Duy Pham Thanh, Ha Vinh, Dong Wook Kim, My Phan Vu Tra, Nguyen Van Minh Hoang, James I. Campbell, Nguyen Van Minh Hoang, Nguyen Thanh Vinh, Pham Van Minh, My Phan Vu Tra, Cao Thu Thuy, Tran Thi Thu Nga and 20 other authors

Tracking the establishment of local endemic populations of an emergent enteric pathogen

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John Kiiru, Ankur Mutreja, Ahmed Abade Mohamed, Racheal W. Kimani, Joyce Mwituria, Robert Onsare Sanaya, Jane Muyodi, Gunturu Revathi, Julian Parkhill

ORCID

, Nicholas Thomson, Gordon Dougan, Samuel Kariuki

A Study on the Geophylogeny of Clinical and Environmental Vibrio cholerae in Kenya

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Alan W. Walker

ORCID

, Julian Parkhill

ORCID

Fighting Obesity with Bacteria

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This paper is made freely available by the publisher.

Julian Parkhill

ORCID

What has high-throughput sequencing ever done for us?

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Robert A. Kingsley

ORCID

, Sally Kay, Thomas Richard Connor, Lars Barquist

ORCID

, Leanne Sait, Kathryn E. Holt

ORCID

, Karthi Sivaraman, Thomas Wileman, David Goulding, Simon Clare, Christine Hale, Aswin Seshasayee, Simon Harris, Nicholas R. Thomson, Paul P. Gardner and 6 other authors

Genome and Transcriptome Adaptation Accompanying Emergence of the Definitive Type 2 Host-Restricted Salmonella enterica Serovar Typhimurium Pathovar

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Sandra Reuter, Matthew J. Ellington, Edward J. P. Cartwright, Claudio U. Köser, M. Estée Török, Theodore Gouliouris

ORCID

, Simon R. Harris, Nicholas M. Brown, Matthew T. G. Holden, Mike Quail, Julian Parkhill

ORCID

, Geoffrey P. Smith, Stephen D. Bentley, Sharon J. Peacock

Rapid Bacterial Whole-Genome Sequencing to Enhance Diagnostic and Public Health Microbiology

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Brianna Lindsay, Mihai Pop, Martin Antonio, Alan W. Walker

ORCID

, Volker Mai, Dilruba Ahmed, Joseph Oundo, Boubou Tamboura, Sandra Panchalingam, Myron M. Levine, Karen Kotloff, Shan Li, Laurence S. Magder, Joseph N. Paulson, Bo Liu and 40 other authors

Survey of Culture, GoldenGate Assay, Universal Biosensor Assay, and 16S rRNA Gene Sequencing as Alternative Methods of Bacterial Pathogen Detection

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Claudio U. Köser, Claudio U. Köser, Josephine M. Bryant, Jennifer Becq, M. Estée Török, Josephine M. Bryant, M. Estée Török, Matthew J. Ellington, Marc A. Marti-Renom, Andrew J. Carmichael, Julian Parkhill

ORCID

, Geoffrey P. Smith, Sharon J. Peacock

Whole-Genome Sequencing for Rapid Susceptibility Testing of M. tuberculosis

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Gavin K. Paterson, Ewan M. Harrison, Emily F. Craven, Andreas Petersen, Anders Rhod Larsen, Matthew J. Ellington, M. Estée Török, Me Estée Török, Sharon J. Peacock, Julian Parkhill

ORCID

, Ruth N. Zadoks, Mark A. Holmes

ORCID

Incidence and Characterisation of Methicillin-Resistant Staphylococcus aureus (MRSA) from Nasal Colonisation in Participants Attending a Cattle Veterinary Conference in the UK

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Simon R. Harris, M. E. Török, Edward J. P. Cartwright, Michael A. Quail, Sharon J. Peacock, Julian Parkhill

ORCID

Read and assembly metrics inconsequential for clinical utility of whole-genome sequencing in mapping outbreaks

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