Papers authored by Julian Parkhill
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2020
Evangelos Mourkas 
,
Aidan J. Taylor,
Guillaume Méric,
Sion C. Bayliss,
Ben Pascoe ,
Leonardos Mageiros,
Jessica K. Calland ,
Matthew D. Hitchings ,
Anne Ridley,
Ana Vidal,
Ken J. Forbes,
Norval J. C. Strachan,
Craig T. Parker ,
Julian Parkhill ,
Keith A. Jolley
and 4 other authors
Download from doi.org
,
Aidan J. Taylor,
Guillaume Méric,
Sion C. Bayliss,
Ben Pascoe ,
Leonardos Mageiros,
Jessica K. Calland ,
Matthew D. Hitchings ,
Anne Ridley,
Ana Vidal,
Ken J. Forbes,
Norval J. C. Strachan,
Craig T. Parker ,
Julian Parkhill ,
Keith A. Jolley
and 4 other authors
Download from doi.org
Elisa Venturini ,
Sarah L. Svensson ,
Sandra Maaß ,
Rick Gelhausen ,
Florian Eggenhofer ,
Lei Li ,
Amy K. Cain ,
Julian Parkhill ,
Dörte Becher ,
Rolf Backofen ,
Lars Barquist ,
Cynthia M. Sharma ,
Alexander J. Westermann ,
Jörg Vogel
Download from academic.oup.com
,
Sarah L. Svensson ,
Sandra Maaß ,
Rick Gelhausen ,
Florian Eggenhofer ,
Lei Li ,
Amy K. Cain ,
Julian Parkhill ,
Dörte Becher ,
Rolf Backofen ,
Lars Barquist ,
Cynthia M. Sharma ,
Alexander J. Westermann ,
Jörg Vogel
Download from academic.oup.com
2019
Eike J. Steinig,
Herminia de Lencastre,
Steinig Ej,
D. Ashley Robinson,
Sebastian Duchene,
Stefan Monecke,
Robinson Da,
Maho Yokoyama,
Richard V. Goering,
Maisem Laabei,
Ralf Ehricht,
Peter Slickers,
Margaret Ip ,
Matthew V. N. O’Sullivan,
Patiyan Andersson
and 27 other authors
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,
Matthew V. N. O’Sullivan,
Patiyan Andersson
and 27 other authors
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Amy K. Cain ,
Laura M. Nolan ,
Geraldine J. Sullivan ,
Cynthia B. Whitchurch ,
Alain Filloux ,
Julian Parkhill
,
Laura M. Nolan ,
Geraldine J. Sullivan ,
Cynthia B. Whitchurch ,
Alain Filloux ,
Julian Parkhill
Complete Genome Sequence of Pseudomonas aeruginosa Reference Strain PAK
Download from journals.asm.org
Pravech Ajawatanawong,
Hideki Yanai,
Nat Smittipat,
Areeya Disratthakit,
Norio Yamada,
Reiko Miyahara ,
Supalert Nedsuwan,
Worarat Imasanguan,
Pacharee Kantipong,
Boonchai Chaiyasirinroje,
Jiraporn Wongyai,
Supada Plitphonganphim,
Pornpen Tantivitayakul,
Jody Phelan ,
Julian Parkhill
and 11 other authors
Download from www.nature.com
,
Supalert Nedsuwan,
Worarat Imasanguan,
Pacharee Kantipong,
Boonchai Chaiyasirinroje,
Jiraporn Wongyai,
Supada Plitphonganphim,
Pornpen Tantivitayakul,
Jody Phelan ,
Julian Parkhill
and 11 other authors
Download from www.nature.com
Álvaro Chiner-Oms ,
Michael Berney ,
Christine Boinett,
Fernando González-Candelas ,
Douglas B. Young,
Sebastien Gagneux,
William R. Jacobs ,
Julian Parkhill ,
Teresa Cortes ,
Iñaki Comas
Download from www.nature.com
,
Michael Berney ,
Christine Boinett,
Fernando González-Candelas ,
Douglas B. Young,
Sebastien Gagneux,
William R. Jacobs ,
Julian Parkhill ,
Teresa Cortes ,
Iñaki Comas
Download from www.nature.com
Mark R. Davies ,
Liam McIntyre,
Ankur Mutreja,
Jake A. Lacey,
John A. Lees,
Rebecca J. Towers,
Sebastián Duchêne,
Pierre R. Smeesters,
Hannah R. Frost ,
David J. Price ,
Matthew T. G. Holden ,
Sophia David,
Philip M. Giffard,
Kate A. Worthing,
Anna C. Seale
and 23 other authors
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,
Liam McIntyre,
Ankur Mutreja,
Jake A. Lacey,
John A. Lees,
Rebecca J. Towers,
Sebastián Duchêne,
Pierre R. Smeesters,
Hannah R. Frost ,
David J. Price ,
Matthew T. G. Holden ,
Sophia David,
Philip M. Giffard,
Kate A. Worthing,
Anna C. Seale
and 23 other authors
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Ben Pascoe ,
Lisa K. Williams ,
Jessica K. Calland,
Guillaume Meric ,
Matthew D. Hitchings ,
Myles Dyer,
Joseph Ryder ,
Sophie Shaw ,
Bruno S. Lopes,
Cosmin Chintoan-Uta ,
Elaine Allan,
Ana Vidal,
Catherine Fearnley,
Paul Everest,
Justin A. Pachebat
and 17 other authors
,
Lisa K. Williams ,
Jessica K. Calland,
Guillaume Meric ,
Matthew D. Hitchings ,
Myles Dyer,
Joseph Ryder ,
Sophie Shaw ,
Bruno S. Lopes,
Cosmin Chintoan-Uta ,
Elaine Allan,
Ana Vidal,
Catherine Fearnley,
Paul Everest,
Justin A. Pachebat
and 17 other authors
Domestication of Campylobacter jejuni NCTC 11168
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Ewan M. Harrison ,
Xiaoliang Ba ,
Francesc Coll ,
Beth Blane ,
Olivier Restif,
Henry Carvell,
Claudio U. Köser ,
Dorota Jamrozy ,
Sandra Reuter,
Andrew Lovering,
Nicholas Gleadall,
Katherine L. Bellis ,
Anne-Catrin Uhlemann,
Franklin D. Lowy,
Ruth C. Massey
and 10 other authors
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,
Xiaoliang Ba ,
Francesc Coll ,
Beth Blane ,
Olivier Restif,
Henry Carvell,
Claudio U. Köser ,
Dorota Jamrozy ,
Sandra Reuter,
Andrew Lovering,
Nicholas Gleadall,
Katherine L. Bellis ,
Anne-Catrin Uhlemann,
Franklin D. Lowy,
Ruth C. Massey
and 10 other authors
Download from www.nature.com
Mark R. Davies ,
Liam McIntyre,
Ankur Mutreja,
Jake A. Lacey ,
John A. Lees,
Rebecca J. Towers,
Sebastián Duchêne,
Pierre R. Smeesters,
Hannah R. Frost ,
David J. Price ,
Matthew T. G. Holden ,
Sophia David,
Philip M. Giffard,
Kate A. Worthing,
Anna C. Seale
and 23 other authors
,
Liam McIntyre,
Ankur Mutreja,
Jake A. Lacey ,
John A. Lees,
Rebecca J. Towers,
Sebastián Duchêne,
Pierre R. Smeesters,
Hannah R. Frost ,
David J. Price ,
Matthew T. G. Holden ,
Sophia David,
Philip M. Giffard,
Kate A. Worthing,
Anna C. Seale
and 23 other authors
Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics
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Kathy E. Raven,
Catherine Ludden,
Theodore Gouliouris ,
Beth Blane,
Plamena Naydenova,
Nicholas M. Brown,
Julian Parkhill ,
Sharon J. Peacock
Download from doi.org
,
Beth Blane,
Plamena Naydenova,
Nicholas M. Brown,
Julian Parkhill ,
Sharon J. Peacock
Download from doi.org
2018
Matthew J. Dorman ,
Theresa Feltwell,
David A. Goulding,
Julian Parkhill ,
Francesca L. Short
,
Theresa Feltwell,
David A. Goulding,
Julian Parkhill ,
Francesca L. Short
The capsule regulatory network of Klebsiella pneumoniae defined by density-TraDISort
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Emily J. Richardson,
Rodrigo Bacigalupe,
Ewan M. Harrison,
Lucy A. Weinert,
Samantha Lycett ,
Manouk Vrieling,
Kirsty Robb,
Paul A. Hoskisson ,
Matthew T. G. Holden ,
Edward J. Feil,
Gavin K. Paterson,
Steven Y. C. Tong,
Adebayo Shittu,
Willem van Wamel,
David M. Aanensen
and 5 other authors
,
Manouk Vrieling,
Kirsty Robb,
Paul A. Hoskisson ,
Matthew T. G. Holden ,
Edward J. Feil,
Gavin K. Paterson,
Steven Y. C. Tong,
Adebayo Shittu,
Willem van Wamel,
David M. Aanensen
and 5 other authors
Gene exchange drives the ecological success of a multi-host bacterial pathogen
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Amy K. Cain ,
Christine J. Boinett,
Lars Barquist,
Janina Dordel,
Maria Fookes,
Matthew Mayho,
Matthew J. Ellington,
David Goulding,
Derek Pickard,
Ryan R. Wick ,
Kathryn E. Holt,
Julian Parkhill ,
Nicholas R. Thomson
Download from www.nature.com
,
Christine J. Boinett,
Lars Barquist,
Janina Dordel,
Maria Fookes,
Matthew Mayho,
Matthew J. Ellington,
David Goulding,
Derek Pickard,
Ryan R. Wick ,
Kathryn E. Holt,
Julian Parkhill ,
Nicholas R. Thomson
Download from www.nature.com
John A. Lees ,
Bart Ferwerda ,
Philip Hc C. Kremer,
Mercedes Valls Serón,
Nicole E. Wheeler,
Mercedes Valls Serón,
Nicholas J. Croucher ,
Rebecca A. Gladstone,
Hester J. Bootsma,
Nynke Y. Rots,
Alienke J. Wijmega-Monsuur,
Elisabeth Am M. Sanders,
Lees Ja,
Krzysztof Trzciński,
Anne L. Wyllie
and 47 other authors
,
Bart Ferwerda ,
Philip Hc C. Kremer,
Mercedes Valls Serón,
Nicole E. Wheeler,
Mercedes Valls Serón,
Nicholas J. Croucher ,
Rebecca A. Gladstone,
Hester J. Bootsma,
Nynke Y. Rots,
Alienke J. Wijmega-Monsuur,
Elisabeth Am M. Sanders,
Lees Ja,
Krzysztof Trzciński,
Anne L. Wyllie
and 47 other authors
Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis
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2017
François-Xavier Weill ,
Daryl Domman ,
Elisabeth Njamkepo ,
Cheryl Tarr ,
Jean Rauzier,
Nizar Fawal ,
Karen H. Keddy ,
Henrik Salje ,
Sandra Moore,
Asish K. Mukhopadhyay,
Raymond Bercion ,
Francisco J. Luquero ,
Antoinette Ngandjio ,
Mireille Dosso ,
Elena Monakhova
and 26 other authors
,
Daryl Domman ,
Elisabeth Njamkepo ,
Cheryl Tarr ,
Jean Rauzier,
Nizar Fawal ,
Karen H. Keddy ,
Henrik Salje ,
Sandra Moore,
Asish K. Mukhopadhyay,
Raymond Bercion ,
Francisco J. Luquero ,
Antoinette Ngandjio ,
Mireille Dosso ,
Elena Monakhova
and 26 other authors
Genomic history of the seventh pandemic of cholera in Africa
Download from fieldresearch.msf.org
Martin Hunt ,
Mather Ae,
Alison E. Mather,
Leonor Sánchez-Busó ,
Page Aj,
Andrew J. Page ,
Julian Parkhill ,
Keane Ja,
Jacqueline A. Keane,
Simon R. Harris ,
Harris Sr
,
Mather Ae,
Alison E. Mather,
Leonor Sánchez-Busó ,
Page Aj,
Andrew J. Page ,
Julian Parkhill ,
Keane Ja,
Jacqueline A. Keane,
Simon R. Harris ,
Harris Sr
ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads
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Diane Esson,
Srishti Gupta,
David Bailey,
Paul Wigley,
Amy Wedley,
Ae Mather,
Guillaume Méric,
Pietro Mastroeni ,
Sk Sheppard,
Nr Thomson,
Julian Parkhill ,
Dj Maskell ,
Graham Christie,
Aj Grant
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,
Sk Sheppard,
Nr Thomson,
Julian Parkhill ,
Dj Maskell ,
Graham Christie,
Aj Grant
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