Kasper Daniel Hansen
Johns Hopkins University
44 papers found
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ShinyMethyl: interactive quality control of Illumina 450k DNA methylation arrays in R
Download from dx.doi.orgCoverage recommendations for methylation analysis by whole genome bisulfite sequencing
Download from www.ncbi.nlm.nih.govOrchestrating high-throughput genomic analysis with Bioconductor
Download from www.nature.comBacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells
Download from doi.orgReconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data
Download from link.springer.comPublic data and open source tools for multi-assay genomic investigation of disease
Download from doi.orgTesting and Validation of Computational Methods for Mass Spectrometry
Download from dx.doi.orgDNA methylation is stable during replication and cell cycle arrest
Download from dx.doi.orgRail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce.
Download from doi.orgWhole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver
Download from genome.cshlp.org“Gap hunting” to characterize clustered probe signals in Illumina methylation array data
Download from doi.orgPreprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi
Download from academic.oup.comLinear models enable powerful differential activity analysis in massively parallel reporter assays
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