Researcher
Kasper Daniel Hansen
Johns Hopkins Medicine
Statistics
45 papers found
All papers authored by Kasper Daniel Hansen
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Bongsoo Park,
Rengasamy Palanivel,
Vinesh Vinayachandran ,
Jeffrey A. Deiuliis ,
Roopesh Singh Gangwar ,
Lopa M. Das,
Jinhu Yin,
Youngshim Choi ,
Sadeer Al-Kindi,
Mukesh K. Jain,
Kasper D. Hansen ,
Shyam Biswal
Metabolic effects of air pollution exposure and reversibility
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Carosso Ga,
Leandros Boukas,
Jonathan J. Augustin ,
Augustin Jj,
Nguyen Hn,
Ha Nam Nguyen ,
Winer Bl,
Briana L. Winer,
Gabrielle H. Cannon,
Cannon Gh,
Robertson Jd,
Johanna D. Robertson,
Li Zhang,
Kasper D. Hansen
and 5 other authors
Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome
Download from doi.org
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Alex Bortvin
Transient reduction of DNA methylation at the onset of meiosis in male mice
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Yunjiang Qiu,
David U. Gorkin ,
Ming Hu ,
Kasper D. Hansen
Removing unwanted variation between samples in Hi-C experiments
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Brian Roe,
Michael Salvatore,
Saboor Shad,
Jeffrey A. Thomas,
Gary Walters,
Michael Washington,
Joseph Wheeler,
Daniel C. Rohrer ,
Dana R. Valley,
Abhi Rao,
Jeffery P. Struewing,
Simona Volpi,
Lindsay F. Rizzardi ,
Nicola Rinaldi
and 81 other authors
Enhancing GTEx by bridging the gaps between genotype, gene expression, and disease
Download from www.nature.com
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Loyal A. Goff ,
Kasper D. Hansen
Linear models enable powerful differential activity analysis in massively parallel reporter assays
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Kasper D. Hansen
Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi
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M. Daniele Fallin
“Gap hunting” to characterize clustered probe signals in Illumina methylation array data
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Andrew E. Jaffe,
Jean-Philippe Fortin,
José Alquicira-Hernández ,
Leonardo Collado-Torres ,
Siruo Wang,
Robert A. Phillips Iii,
Robert A. Phillips,
Nishika Karbhari,
Kasper D. Hansen ,
Ben Langmead,
Jeffrey T. Leek
Download from link.springer.com
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Andrew P. Feinberg
Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver
Download from genome.cshlp.org
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Christopher Wilks,
Kasper Daniel Hansen ,
Jeffrey T. Leek,
Ben Langmead
Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce.
Download from doi.org
DNA methylation is stable during replication and cell cycle arrest
Download from dx.doi.org
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Kasper Daniel Hansen ,
Michael R. Hoopmann,
Henning Hermjakob ,
Oliver Kohlbacher,
Andreas Beyer
Testing and Validation of Computational Methods for Mass Spectrometry
Download from dx.doi.org
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Kasper Daniel Hansen ,
Benjamin Haibe-Kains
Public data and open source tools for multi-assay genomic investigation of disease
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Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data
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Luis A. Garza,
Arni Runarsson,
Xin Li,
Anna L. Chien,
Timothy S. Wang,
Sherry G. Leung,
Sewon Kang,
Andrew P. Feinberg
Age and sun exposure-related widespread genomic blocks of hypomethylation in nonmalignant skin
Download from link.springer.com
,
Julia L. MacIsaac,
Vania Yotova,
Anne Dumaine,
Anne Danckaert,
Francesca Luca,
Jean-Christophe Grenier,
Kasper D. Hansen ,
Brigitte Gicquel,
Miao Yu,
Athma Pai,
Chuan He
and 6 other authors
Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells
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Hui-Ju Tsai,
Xin Liu,
Xin Xu ,
Timothy A. Thornton,
Deanna Caruso,
Corinne A. Keet,
Yifei Sun,
Guoying Wang,
Wei Luo,
Rajesh Kumar,
Ramsay Fuleihan,
Anne Marie Singh
and 17 other authors
Download from www.nature.com
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Vincent J. Carey,
Robert Gentleman,
Simon Anders ,
Marc Carlson,
Benilton S. Carvalho ,
Hector Corrada Bravo,
Sean Davis ,
Laurent Gatto ,
Thomas Girke,
Raphael Gottardo,
Florian Hahne,
Kasper D. Hansen ,
Rafael A. Irizarry,
Michael Lawrence
and 11 other authors
Orchestrating high-throughput genomic analysis with Bioconductor
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