Kjong-Van Lehmann - Dissemin

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All papers authored by Kjong-Van Lehmann

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2023 Charlotte Bunne

ORCID

, Stefan G. Stark, Gabriele Gut

ORCID

, Jacobo Sarabia del Castillo, Mitch Levesque, Kjong-Van Lehmann

ORCID

, Lucas Pelkmans

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, Andreas Krause

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, Gunnar Rätsch

ORCID

Author Correction: Learning single-cell perturbation responses using neural optimal transport

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Charlotte Bunne

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, Stefan G. Stark, Gabriele Gut

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, Jacobo Sarabia del Castillo, Mitch Levesque, Kjong Van Lehmann

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, Kjong-Van Lehmann, Lucas Pelkmans

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, Andreas Krause

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, Gunnar Rätsch

ORCID

Learning single-cell perturbation responses using neural optimal transport

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Chiara Maria Lavinia Loeffler, Omar S. M. El Nahhas, Hannah Sophie Muti, Tobias Seibel, Didem Cifci, Marko van Treeck, Marco Gustav, Zunamys I. Carrero, Nadine T. Gaisa, Kjong Van Lehmann

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, Alexandra Leary, Pier Selenica, Jorge S. Reis Filho, Nadina Ortiz Bruechle, Jakob Nikolas Kather

Direct prediction of Homologous Recombination Deficiency from routine histology in ten different tumor types with attention-based Multiple Instance Learning: a development and validation study

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2022 Kjong-Van Lehmann

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ORCID

, Magdalena Murr, Gunnar Rätsch

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RNA Instant Quality Check: Alignment-Free RNA-Degradation Detection

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Hana Rozhoňová, Daniel Danciu, Stefan Stark

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, Gunnar Rätsch

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, André Kahles

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, Kjong-Van Lehmann

ORCID

SECEDO: SNV-based subclone detection using ultra-low coverage single-cell DNA sequencing

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2021 Anja Irmisch, Ximena Bonilla, Stéphane Chevrier, Kjong-Van Lehmann

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, Franziska Singer, Nora C. Toussaint, Cinzia Esposito, Julien Mena, Emanuela S. Milani, Ruben Casanova, Daniel J. Stekhoven, Rebekka Wegmann, Francis Jacob, Bettina Sobottka, Sandra Goetze

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and 105 other authors

The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support

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2020 Stefan G. Stark, Jacobo Sarabia del Castillo, Joanna Ficek, Francesco Locatello, Ximena Bonilla, Stéphane Chevrier, Franziska Singer, Rudolf Aebersold, Faisal S. Al-Quaddoomi, Jonas Albinus, Ilaria Alborelli, Sonali Andani, Per-Olof Attinger, Marina Bacac, Daniel Baumhoer and 110 other authors

SCIM: universal single-cell matching with unpaired feature sets.

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Xinrui Lyu, Jean Garret, Gunnar Rätsch, Kjong-Van Lehmann

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Mutational signature learning with supervised negative binomial non-negative matrix factorization

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Kjong-Van Lehmann

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Pan-cancer analysis of whole genomes.

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Kjong-Van Lehmann

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Genomic basis for RNA alterations in cancer.

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Christian von Mering, Jing Zhang, Xiaotong Yao, Cheng-Zhong Zhang, Jiayin Wang, David A. Wheeler, Guanming Wu, Xuanping Zhang, Yan Zhang, Joachim Weischenfeldt, Lixing Yang, Sung-Soo Yoon, Jonathan Warrell, Sebastian M. Waszak, Jun Yu and 1327 other authors

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

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2019 Deniz Demircioğlu, Engin Cukuroglu, Martin Kindermans, Tannistha Nandi, Claudia Calabrese, Nuno A. Fonseca, André Kahles, Kjong-Van Lehmann

ORCID

, Oliver Stegle, Alvis Brazma, Angela N. Brooks, Gunnar Rätsch, Patrick Tan, Jonathan Göke

A Pan-cancer Transcriptome Analysis Reveals Pervasive Regulation through Alternative Promoters

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2018 André Kahles, Nora C. Toussaint, Kjong-Van Lehmann

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, Matthias Hüser, Stefan G. Stark, Timo Sachsenberg, Oliver Stegle, Oliver Kohlbacher, Chris Sander, Gunnar Rätsch

ORCID

, Samantha J. Caesar-Johnson, John A. Demchok, Ina Felau, Melpomeni Kasapi, Martin L. Ferguson and 719 other authors

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

2017 Husen M. Umer

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, Lina Wadi, Jing Zhang

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, David A. Wheeler

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, Liis Uusküla-Reimand, Claes Wadelius

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, Kjong Van Lehmann, Tatsuhiko Tsunoda

ORCID

, Qianyun Guo20, Esther Rheinbay

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, Randi Istrup Pedersen

ORCID

, Nielsen Mm, Morten Muhlig Nielsen

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, Andrés Lanzós

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, Carl Herrmann

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and 72 other authors

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

C. Calabrese, K. Lehmann

ORCID

, L. Urban, F. Liu, S. Erkek, Fonseca Na, A. Kahles, H. Kilpinen

ORCID

, J. Markowski, Waszak Sm, Korbel Jo, Z. Zhang, A. Brazma, G. Rätsch, Schwarz Rf and 1 other authors

Assessing the Gene Regulatory Landscape in 1,188 Human Tumors

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Adam Abeshouse, Clement Adebamowo, Sally N. Adebamowo, Rehan Akbani, Teniola Akeredolu, Adrian Ally, Matthew L. Anderson, Pavana Anur, Elizabeth L. Appelbaum, Joshua Armenia, J. Todd Auman, Matthew H. Bailey, Laurence Baker, Miruna Balasundaram, Saianand Balu and 249 other authors

Comprehensive and Integrated Genomic Characterization of Adult Soft Tissue Sarcomas

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Kjong Van Lehmann

ORCID

, Linda Xiang, Fan Zhang, Junjun Zhang, Sebastian M. Waszak, Christina Yung, Shida Zhu, Kui Wu, Huangming Yang, Natalie R. Davidson, Zemin Zhang, Nuno A. Fonseca, Transcriptome Core Group Pcawg, Claudia Calabrese, Fenglin Liu and 41 other authors

Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types

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Antonio Talvane de Oliveira, Anna van Nistelrooij, Daniela Pretti da Cunha Tirapelli, Jose Sebastião dos Santos, Hsin-Ta Wu, Wei Zhang, Alexandra M. Wong, W. Zhang, Joseph E. Willis, Tina Wong, T. Wong, Maciej Wiznerowicz, Lixing X. Yang, Julia S. Zhang, Nils Weinhold and 357 other authors

Integrated genomic characterization of oesophageal carcinoma

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2016 Justin M. Fear, Luis G. León-Novelo, Alison M. Morse, Alison R. Gerken, Kjong Van Lehmann

ORCID

, John Tower, Sergey V. Nuzhdin, Lauren M. McIntyre

Buffering of Genetic Regulatory Networks inDrosophila melanogaster

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2015 Adam Abeshouse, Jaeil Ahn, Rehan Akbani, Adrian Ally, Samirkumar Amin, Christopher D. Andry, Matti Annala, Armen Aprikian, Joshua Armenia, Arshi Arora, J. Todd Auman, Miruna Balasundaram, Saianand Balu, Christopher E. Barbieri, Thomas Bauer and 297 other authors

The Molecular Taxonomy of Primary Prostate Cancer

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