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Felipe da Veiga Leprevost, Björn A. Grüning, Saulo Alves Aflitos, Hannes L. Röst, Julian Uszkoreit, Harald Barsnes, Marc Vaudel, Pablo Moreno, Laurent Gatto, Jonas Weber, Mingze Bai, Rafael C. Jimenez, Timo Sachsenberg, Julianus Pfeuffer, Roberto Vera Alvarez and 3 other authors
BioContainers: An open-source and community-driven framework for software standardization
Oxford University Press (OUP),
Bioinformatics .
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Hannes L. Röst
,
Timo Sachsenberg,
Stephan Aiche,
Chris Bielow,
Hendrik Weisser,
Fabian Aicheler,
Sandro Andreotti,
Hans-Christian Ehrlich,
Petra Gutenbrunner,
Erhan Kenar,
Xiao Liang,
Sven Nahnsen,
Lars Nilse,
Julianus Pfeuffer,
George Rosenberger
and 12 other authors
OpenMS: a flexible open-source software platform for mass spectrometry data analysis
Nature Publishing Group,
Nature Methods , 9(13), p. 741-748.
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Yasset Perez-Riverol
,
Laurent Gatto,
Rui Wang,
Timo Sachsenberg,
Julian Uszkoreit,
Felipe da Veiga Leprevost,
Christian Fufezan,
Tobias Ternent,
Stephen J. Eglen,
Daniel S. S. Katz,
Alexander Konovalov,
Tom Joseph Pollard,
Robert M. Flight,
Kai Blin,
Juan Antonio Vizcaíno
Ten Simple Rules for Taking Advantage of git and GitHub
Public Library of Science,
PLoS Computational Biology , 7(12), p. e1004947.
Download doi.org
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Kundan Sharma, Ajla Hrle, Katharina Kramer, Timo Sachsenberg, Raymond H. J. Staals, Lennart Randau, Anita Marchfelder, John van der Oost, Oliver Kohlbacher, Elena Conti, Henning Urlaub
Elsevier,
Methods , (89), p. 138-148.
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Uzma Zaman, Florian M. Richter, Henning Urlaub, Romina Hofele, Katharina Kramer, Timo Sachsenberg, Oliver Kohlbacher, Christof Lenz
American Society for Biochemistry and Molecular Biology,
Molecular and Cellular Proteomics , 12(14), p. 3196-3210.
Download dx.doi.org
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Stephan Aiche, Timo Sachsenberg, Erhan Kenar, Mathias Walzer, Bernd Wiswedel, Theresa Kristl, Matthew Boyles, Albert Duschl, Christian G. Huber, Michael R. Berthold, Knut Reinert, Oliver Kohlbacher
Wiley-VCH Verlag,
Proteomics , 8(15), p. 1443-1447.
Download doi.org
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Martin Taubert, Martin von Bergen, Jana Seifert, Florian-Alexander Herbst, Timo Sachsenberg, René Kermer, Nico Jehmlich, Oliver Kohlbacher
American Chemical Society,
Journal of Proteome Research , 2(14), p. 619-627.
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Johannes Griss
,
Andrew R. Jones,
Timo Sachsenberg,
Laurent Gatto,
Mathias Walzer,
Jürgen Hartler,
Gerhard G. Thallinger,
Reza M. Salek,
Christoph Steinbeck,
Nadin Neuhauser,
Jürgen Cox,
Steffen Neumann,
Jun Fan,
Florian Reisinger,
Qing-Wei Xu
and 8 other authors
American Society for Biochemistry and Molecular Biology,
Molecular and Cellular Proteomics , 10(13), p. 2765-2775.
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Katharina Kramer, Benedikt M. Beckmann, Timo Sachsenberg
,
Saadia Qamar,
Henning Urlaub,
Kum-Loong Boon,
Matthias W. Hentze,
Oliver Kohlbacher
Nature Publishing Group,
Nature Methods , 10(11), p. 1064-1070.
Download dx.doi.org
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Mathias Walzer, Julian Uszkoreit
,
Da Qi,
Gerhard Mayer,
Timo Sachsenberg,
Martin Eisenacher,
Florian Reisinger,
Jun Fan,
Juan Antonio Vizcaíno,
Faviel F. Gonzalez-Galarza,
Conrad Bessant,
Eric W. Deutsch,
J. Alberto Medina Aunon,
J. Alberto Medina-Aunon,
Juan Pablo Albar
and 2 other authors
The mzQuantML Data Standard for Mass Spectrometry–based Quantitative Studies in Proteomics*
American Society for Biochemistry and Molecular Biology,
Molecular and Cellular Proteomics , 8(12), p. 2332-2340.
Download www.ncbi.nlm.nih.gov
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Jiri Novak, David Hoksza, Timo Sachsenberg, Tomas Skopal, Oliver Kohlbacher
A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools
Springer Verlag,
Advances in Intelligent Systems and Computing , p. 101-109.
Download www.researchgate.net
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Sascha Laubinger, Georg Zeller, Stefan R. Henz, Sabine Buechel, Timo Sachsenberg, Jia-Wei Wang, Gunnar Rätsch, Detlef Weigel
Global effects of the small RNA biogenesis machinery on theArabidopsis thalianatranscriptome
National Academy of Sciences,
Proceedings of the National Academy of Sciences , 41(107), p. 17466-17473.