Ruochi Zhang - Dissemin

Papers authored by Ruochi Zhang

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2024 Yan Wang, Ruochi Zhang

, Qian Yang, Qiong Zhou, Shengde Zhang, Yusi Fan, Lan Huang, Kewei Li, Fengfeng Zhou

FairCare: Adversarial training of a heterogeneous graph neural network with attention mechanism to learn fair representations of electronic health records

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This paper is made freely available by the publisher.

Xiaopeng Xu

, Juexiao Zhou, Chen Zhu, Qing Zhan, Zhongxiao Li

, Ruochi Zhang

, Yu Wang, Xingyu Liao, Xin Gao

Optimization of binding affinities in chemical space with generative pre-trained transformer and deep reinforcement learning

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Ruochi Zhang

, Chao Wu, Qian Yang, Chang Liu, Yan Wang, Kewei Li, Lan Huang, Fengfeng Zhou

MolFeSCue: Enhancing molecular property prediction in Data-Limited and imbalanced contexts using Few-Shot and contrastive learning

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Ruochi Zhang

, Haoran Wu, Chang Liu, Huaping Li, Yuqian Wu, Kewei Li, Yifan Wang, Yifan Deng, Jiahui Chen, Fengfeng Zhou, Others

PepHarmony: A Multi-View Contrastive Learning Framework for Integrated Sequence and Structure-Based Peptide Encoding

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2023 Yan Wang, Ruochi Zhang

, Shengde Zhang, Liming Guo, Qiong Zhou, Bowen Zhao, Xiaotong Mo, Qian Yang, Yajuan Huang, Kewei Li, Yusi Fan, Lan Huang, Fengfeng Zhou

OCMR: A comprehensive framework for optical chemical molecular recognition

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Xiaopeng Xu

, Tiantian Xu

, Juexiao Zhou

, Xingyu Liao

, Ruochi Zhang

, Yu Wang

, Lu Zhang

, Xin Gao

AB-Gen: Antibody Library Design with Generative Pre-Trained Transformer and Deep Reinforcement Learning

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Wenkai Han

, Ningning Chen

, Xinzhou Xu

, Adil Sahil, Juexiao Zhou, Zhongxiao Li

, Huawen Zhong, Elva Gao, Ruochi Zhang

, Yu Wang, Shiwei Sun, Peter Pak-Hang Cheung

, Xin Gao

, Others

Predicting the antigenic evolution of SARS-COV-2 with deep learning

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Haoyang Li

, Juexiao Zhou, Zhongxiao Li

, Siyuan Chen

, Xingyu Liao

, Bin Zhang, Ruochi Zhang

, Yu Wang, Shiwei Sun, Xin Gao

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics

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Xiaopeng Xu, Juexiao Zhou, Chen Zhu, Qing Zhan, Zhongxiao Li, Ruochi Zhang

, Yu Wang, Xingyu Liao, Xin Gao

Optimization of binding affinities in chemical space wit h generative pre-trained transformer and deep reinforcemen t learning [version 1; peer review: 1 approved with

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Xiaopeng Xu, Juexiao Zhou, Chen Zhu, Qing Zhan, Zhongxiao Li, Ruochi Zhang

, Yu Wang, Xingyu Liao, Xin Gao

charlesxu90/sgpt: Optimization of binding affinities in chemical space with transformer and deep reinforcement learning

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Meiyu Duan, Yueying Wang, Dong Zhao, Hongmei Liu, Gongyou Zhang, Kewei Li, Haotian Zhang, Lan Huang, Ruochi Zhang

, Fengfeng Zhou

Orchestrating information across tissues via a novel multitask GAT framework to improve quantitative gene regulation relation modeling for survival analysis

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Ruochi Zhang

, Haoran Wu, Yuting Xiu, Kewei Li, Ningning Chen, Yu Wang, Yan Wang, Xin Gao, Fengfeng Zhou

PepLand: a large-scale pre-trained peptide representation model for a comprehensive landscape of both canonical and non-canonical amino acids

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2022 Chengfeng Xu, Ruochi Zhang

, Wenwei Zhu, Meiyu Duan, Yongming Zhou, Jizhang Bao, Hao Lu, Jie Wang, Minghui Hu, Zhaoyang Hu, Fengfeng Zhou, Others

A polygenic stacking classifier revealed the complicated platelet transcriptomic landscape of adult immune thrombocytopenia

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Daiguo Deng, Zengrong Lei, Xiaobin Hong, Ruochi Zhang

, Fengfeng Zhou

Describe Molecules by a Heterogeneous Graph Neural Network with Transformer-like Attention for Supervised Property Predictions

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2021 Daiguo Deng, Xiaowei Chen, Ruochi Zhang

, Zengrong Lei, Xiaojian Wang

, Fengfeng Zhou

XGraphBoost: Extracting Graph Neural Network-Based Features for a Better Prediction of Molecular Properties

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Xiangju Liu, Yu Zhang, Chunli Fu, Ruochi Zhang

, Fengfeng Zhou

EnRank: An Ensemble Method to Detect Pulmonary Hypertension Biomarkers Based on Feature Selection and Machine Learning Models

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2020 Ruochi Zhang

, Zhehao Guo, Yue Sun, Qi Lu, Zijian Xu, Zhaomin Yao, Meiyu Duan, Shuai Liu, Yanjiao Ren, Lan Huang, Fengfeng Zhou

COVID19XrayNet: A Two-Step Transfer Learning Model for the COVID-19 Detecting Problem Based on a Limited Number of Chest X-Ray Images

Download from link.springer.com

Yao Wang

, Yan Wang

, Chunjie Guo

, Xuping Xie, Sen Liang, Ruochi Zhang

, Wei Pang

, Lan Huang

Cancer genotypes prediction and associations analysis from imaging phenotypes: a survey on radiogenomics

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Haochen Yao, Nan Zhang, Fengfeng Zhou, Ruochi Zhang

, Meiyu Duan, Tianqi Xie, Jiahui Pan, Hong Xu, E’jun Peng, Juanjuan Huang, Yingli Zhang, Xiaoming Xu, Others, Guoqing Wang

Severity Detection For the Coronavirus Disease 2019 (COVID-19) Patients Using a Machine Learning Model Based on the Blood and Urine Tests

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2019 Xin Feng, Ruochi Zhang

, Minge Liu, Quewang Liu, Fei Li, Zhenwei Yan, Fengfeng Zhou

An accurate regression of developmental stages for breast cancer based on transcriptomic biomarkers

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Papers authored by Ruochi Zhang