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Papers authored by Achillefs Kapanidis

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2019 Nicole C. Robb

ORCID

, Jonathan M. Taylor, Amy Kent, Oliver J. Pambos, Barak Gilboa, Maria Evangelidou, Alexios-Fotios A. Mentis

ORCID

, Achillefs N. Kapanidis

ORCID

Rapid functionalisation and detection of viruses via a novel Ca2+-mediated virus-DNA interaction

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Timothy D. Craggs

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, Marko Sustarsic, Anne Plochowietz, Majid Mosayebi, Hendrik Kaju, Andrew Cuthbert, Johannes Hohlbein

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, Laura Domicevica, Philip C. Biggin, Jonathan P. K. Doye

ORCID

, Achillefs N. Kapanidis

ORCID

Substrate conformational dynamics facilitate structure-specific recognition of gapped DNA by DNA polymerase

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Abhishek Mazumder, Achillefs N. Kapanidis

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Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms

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Nicole C. Robb

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, Aartjan J. W. te Velthuis, Ervin Fodor

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, Achillefs N. Kapanidis

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Real-time analysis of single influenza virus replication complexes reveals large promoter-dependent differences in initiation dynamics

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Oliver J. Pambos, Achillefs N. Kapanidis

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Tracking antibiotic mechanisms

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Hannah L. Klein, Kenny K. H. Ang, Michelle R. Arkin, Emily C. Beckwitt, Yi-Hsuan Chang, Jun Fan, Youngho Kwon, Michael J. Morten, Sucheta Mukherjee, Oliver J. Pambos, Hafez el Sayyed, Elizabeth S. Thrall, João P. Vieira-Da-Rocha, Quan Wang, Shuang Wang

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and 11 other authors

Guidelines for DNA recombination and repair studies: Mechanistic assays of DNA repair processes

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2018 Björn Hellenkamp, Sonja Schmid

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, Olga Doroshenko, Oleg Opanasyuk, Ralf Kühnemuth, Soheila Rezaei Adariani, Benjamin Ambrose, Mikayel Aznauryan

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ORCID

, Victoria Birkedal

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, Mark E. Bowen, Hongtao Chen, Thorben Cordes, Tobias Eilert, Carel Fijen and 48 other authors

Precision and accuracy of single-molecule FRET measurements—a multi-laboratory benchmark study

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Achillefs N. Kapanidis

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, Alessia Lepore, Meriem El Karoui

Rediscovering Bacteria through Single-Molecule Imaging in Living Cells

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Achillefs N. Kapanidis

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, Mathew Stracy

Tracking tRNA packages

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Achillefs N. Kapanidis

ORCID

, Stephan Uphoff, Mathew Stracy

Understanding Protein Mobility in Bacteria by Tracking Single Molecules

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David Dulin

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, David L. V. Bauer

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, Anssi M. Malinen, Jacob J. W. Bakermans

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, Martin Kaller, Zakia Morichaud, Ivan Petushkov, Martin Depken, Konstantin Brodolin

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, Andrey Kulbachinskiy, Achillefs N. Kapanidis

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Pausing controls branching between productive and non-productive pathways during initial transcription in bacteria

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Wei Lin, Kalyan Das, David Degen, Abhishek Mazumder, Diego Duchi, Dongye Wang, Yon W. Ebright, Richard Y. Ebright, Elena Sineva, Matthew Gigliotti, Aashish Srivastava, Sukhendu Mandal, Yi Jiang, Yu Liu, Ruiheng Yin and 8 other authors

Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3)

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Diego Duchi, Abhishek Mazumder, Anssi M. Malinen, Richard H. Ebright

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, Achillefs N. Kapanidis

ORCID

The RNA polymerase clamp interconverts dynamically among three states and is stabilized in a partly closed state by ppGpp

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2017 Diego Duchi, Kristofer Gryte, Nicole C. Robb, Zakia Morichaud, Carol Sheppard, Konstantin Brodolin

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, Sivaramesh Wigneshweraraj, Achillefs N. Kapanidis

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Conformational heterogeneity and bubble dynamics in single bacterial transcription initiation complexes

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Mathew Stracy, Achillefs N. Kapanidis

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Single-molecule and super-resolution imaging of transcription in living bacteria

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Federico Garza de Leon, Laura Sellars, Mathew Stracy, Stephen J. W. Busby, Achillefs N. Kapanidis

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Tracking Low-Copy Transcription Factors in Living Bacteria: The Case of the lac Repressor

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Lisa E. Lamberte, Gabriele Baniulyte, Shivani S. Singh, Anne M. Stringer, Richard P. Bonocora, Mathew Stracy, Achillefs N. Kapanidis

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, Joseph T. Wade, David C. Grainger

Horizontally acquired AT-rich genes in Escherichia coli cause toxicity by sequestering RNA polymerase

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2016 Nicole C. Robb, Aartjan J. W. te Velthuis, Ralph Wieneke, Robert Tampé, Thorben Cordes, Ervin Fodor

ORCID

, Achillefs N. Kapanidis

ORCID

Single-molecule FRET reveals the pre-initiation and initiation conformations of influenza virus promoter RNA

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Anne Plochowietz, Ian Farrell, Zeev Smilansky, Barry S. Cooperman, Achillefs N. Kapanidis

ORCID

In vivosingle-RNA tracking shows that most tRNA diffuses freely in live bacteria

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Diego Duchi, David L. V. Bauer, Laurent Fernandez, Geraint Evans, Nicole Robb, Ling Chin Hwang, Kristofer Gryte, Alexandra Tomescu, Pawel Zawadzki, Zakia Morichaud, Konstantin Brodolin, Achillefs N. Kapanidis

ORCID

RNA Polymerase Pausing during Initial Transcription

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