All papers authored by Julia Waldman
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2022
Hattie Chung 
,
Alexandre Melnikov,
Cristin McCabe,
Eugene Drokhlyansky,
Nicholas Van Wittenberghe,
Emma M. Magee ,
Julia Waldman ,
Avrum Spira,
Fei Chen,
Sarah Mazzilli,
Orit Rozenblatt-Rosen,
Aviv Regev
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,
Alexandre Melnikov,
Cristin McCabe,
Eugene Drokhlyansky,
Nicholas Van Wittenberghe,
Emma M. Magee ,
Julia Waldman ,
Avrum Spira,
Fei Chen,
Sarah Mazzilli,
Orit Rozenblatt-Rosen,
Aviv Regev
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Gökcen Eraslan ,
Eugene Drokhlyansky ,
Shankara Anand ,
Evgenij Fiskin ,
Ayshwarya Subramanian ,
Michal Slyper ,
Jiali Wang ,
Nicholas Van Wittenberghe ,
John M. Rouhana,
Julia Waldman ,
Orr Ashenberg ,
Monkol Lek,
Danielle Dionne ,
Thet Su Win,
Michael S. Cuoco
and 11 other authors
,
Eugene Drokhlyansky ,
Shankara Anand ,
Evgenij Fiskin ,
Ayshwarya Subramanian ,
Michal Slyper ,
Jiali Wang ,
Nicholas Van Wittenberghe ,
John M. Rouhana,
Julia Waldman ,
Orr Ashenberg ,
Monkol Lek,
Danielle Dionne ,
Thet Su Win,
Michael S. Cuoco
and 11 other authors
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
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Richard K. Perez ,
M. Grace Gordon ,
Meena Subramaniam ,
Min Cheol Kim ,
George C. Hartoularos ,
Sasha Targ,
Yang Sun ,
Anton Ogorodnikov,
Raymund Bueno ,
Andrew Lu ,
Mike Thompson ,
Nadav Rappoport ,
Andrew Dahl ,
Cristina M. Lanata ,
Mehrdad Matloubian
and 15 other authors
,
M. Grace Gordon ,
Meena Subramaniam ,
Min Cheol Kim ,
George C. Hartoularos ,
Sasha Targ,
Yang Sun ,
Anton Ogorodnikov,
Raymund Bueno ,
Andrew Lu ,
Mike Thompson ,
Nadav Rappoport ,
Andrew Dahl ,
Cristina M. Lanata ,
Mehrdad Matloubian
and 15 other authors
Single-cell RNA-seq reveals cell type–specific molecular and genetic associations to lupus
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2021
Gokcen Eraslan,
Eugene Drokhlyansky,
Shankara Anand,
Ayshwarya Subramanian,
Evgenij Fiskin,
Michal Slyper,
Jiali Wang,
Nicholas Van Wittenberghe,
John M. Rouhana,
Julia Waldman ,
Orr Ashenberg,
Danielle Dionne,
Thet Su Win,
Michael S. Cuoco,
Olena Kuksenko
and 9 other authors
,
Orr Ashenberg,
Danielle Dionne,
Thet Su Win,
Michael S. Cuoco,
Olena Kuksenko
and 9 other authors
Single-nucleus cross-tissue molecular reference maps to decipher disease gene function
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Shahar Alon,
Asmamaw T. Wassie,
Andrew G. Xue,
Chun-Chen Yao,
Ru Wang,
Chih-Chieh (Jay) Yu,
N. A. Walton,
A. T. Wassie,
S. S. Watson,
J. Weselak,
S. A. Wild,
E. Williams,
J. Windhager,
T. Whitmarsh,
C. Xia
and 105 other authors
Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems.
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Michal Slyper,
Caroline B. M. Porter,
Orr Ashenberg,
Julia Waldman ,
Eugene Drokhlyansky,
Isaac Wakiro,
Christopher Smillie,
Gabriela Smith-Rosario,
Jingyi Wu,
Danielle Dionne,
Sébastien Vigneau,
Judit Jané-Valbuena,
Timothy L. Tickle,
Sara Napolitano,
Mei-Ju Su
and 35 other authors
Download from www.nature.com
,
Eugene Drokhlyansky,
Isaac Wakiro,
Christopher Smillie,
Gabriela Smith-Rosario,
Jingyi Wu,
Danielle Dionne,
Sébastien Vigneau,
Judit Jané-Valbuena,
Timothy L. Tickle,
Sara Napolitano,
Mei-Ju Su
and 35 other authors
Download from www.nature.com
Ayshwarya Subramanian,
Astrid Weins,
Katherine A. Vernon,
Michal Slyper,
Malte D. Luecken,
Kirk Gosik,
Dan Dubinsky,
Michael S. Cuoco,
Keith Keller,
Jason Purnell,
Julia Waldman ,
Lan Nguyen,
Danielle Dionne,
Orit Rozenblatt-Rosen,
Aviv Regev
and 1 other authors
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,
Lan Nguyen,
Danielle Dionne,
Orit Rozenblatt-Rosen,
Aviv Regev
and 1 other authors
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Benjamin Izar,
Itay Tirosh ,
Elizabeth H. Stover ,
Isaac Wakiro ,
Michael S. Cuoco ,
Idan Alter,
Christopher Rodman,
Rachel Leeson,
Mei-Ju Su,
Parin Shah,
Marcin Iwanicki ,
Sarah R. Walker,
Abhay Kanodia,
Johannes C. Melms ,
Shaolin Mei
and 19 other authors
,
Elizabeth H. Stover ,
Isaac Wakiro ,
Michael S. Cuoco ,
Idan Alter,
Christopher Rodman,
Rachel Leeson,
Mei-Ju Su,
Parin Shah,
Marcin Iwanicki ,
Sarah R. Walker,
Abhay Kanodia,
Johannes C. Melms ,
Shaolin Mei
and 19 other authors
A single-cell landscape of high-grade serous ovarian cancer
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Michal Slyper,
Caroline Bm M. Porter,
Orr Ashenberg,
Jingyi Wu,
Julia Waldman ,
Eugene Drokhlyansky,
Sébastien Vigneau,
Judit Jané-Valbuena,
Timothy L. Tickle,
Isaac Wakiro,
Sara Napolitano,
Christopher Smillie,
Mei-Ju Su,
Anand G. Patel ,
Asa Karlstrom
and 35 other authors
,
Eugene Drokhlyansky,
Sébastien Vigneau,
Judit Jané-Valbuena,
Timothy L. Tickle,
Isaac Wakiro,
Sara Napolitano,
Christopher Smillie,
Mei-Ju Su,
Anand G. Patel ,
Asa Karlstrom
and 35 other authors
A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors
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2019
Ayshwarya Subramanian ,
Eriene-Heidi Sidhom ,
Maheswarareddy Emani,
Katherine Vernon,
Nareh Sahakian,
Yiming Zhou ,
Maria Kost-Alimova,
Michal Slyper,
Julia Waldman ,
Danielle Dionne ,
Lan T. Nguyen,
Astrid Weins,
Jamie L. Marshall ,
Orit Rosenblatt-Rosen,
Aviv Regev
and 1 other authors
Download from www.nature.com
,
Eriene-Heidi Sidhom ,
Maheswarareddy Emani,
Katherine Vernon,
Nareh Sahakian,
Yiming Zhou ,
Maria Kost-Alimova,
Michal Slyper,
Julia Waldman ,
Danielle Dionne ,
Lan T. Nguyen,
Astrid Weins,
Jamie L. Marshall ,
Orit Rosenblatt-Rosen,
Aviv Regev
and 1 other authors
Download from www.nature.com
Christopher S. Smillie,
Moshe Biton,
Jose Ordovas-Montanes,
Keri M. Sullivan,
Grace Burgin,
Daniel B. Graham,
Rebecca H. Herbst,
Noga Rogel,
Michal Slyper,
Julia Waldman ,
Malika Sud,
Elizabeth Andrews,
Gabriella Velonias,
Adam L. Haber,
Karthik Jagadeesh
and 18 other authors
,
Malika Sud,
Elizabeth Andrews,
Gabriella Velonias,
Adam L. Haber,
Karthik Jagadeesh
and 18 other authors
Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
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2018
Jellert T. Gaublomme,
Bo Li ,
Cristin McCabe,
Abigail Knecht,
Yiming Yang ,
Eugene Drokhlyansky,
Nicholas Van Wittenberghe,
Nicholas Van Wittenberghe,
Julia Waldman ,
Danielle Dionne ,
Lan Nguyen,
Phil De Jager,
Philip L. De Jager ,
Bertrand Yeung,
Xinfang Zhao
and 3 other authors
,
Cristin McCabe,
Abigail Knecht,
Yiming Yang ,
Eugene Drokhlyansky,
Nicholas Van Wittenberghe,
Nicholas Van Wittenberghe,
Julia Waldman ,
Danielle Dionne ,
Lan Nguyen,
Phil De Jager,
Philip L. De Jager ,
Bertrand Yeung,
Xinfang Zhao
and 3 other authors
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
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Daniel T. Montoro ,
Adam L. Haber,
Moshe Biton,
Vladimir Vinarsky,
Brian Lin,
Susan E. Birket,
Feng Yuan ,
Sijia Chen,
Hui Min Leung,
Jorge Villoria,
Noga Rogel,
Grace Burgin,
Alexander M. Tsankov,
Avinash Waghray,
Michal Slyper
and 14 other authors
,
Adam L. Haber,
Moshe Biton,
Vladimir Vinarsky,
Brian Lin,
Susan E. Birket,
Feng Yuan ,
Sijia Chen,
Hui Min Leung,
Jorge Villoria,
Noga Rogel,
Grace Burgin,
Alexander M. Tsankov,
Avinash Waghray,
Michal Slyper
and 14 other authors
A revised airway epithelial hierarchy includes CFTR-expressing ionocytes
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