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Papers authored by John Greally

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2009 Melissa J. Fazzari, John M. Greally

Introduction to Epigenomics and Epigenome-Wide Analysis

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Shannon R. Morey Kinney, Wa Zhang, Marien Pascual, John M. Greally

, Bryan M. Gillard, Ellen Karasik, Barbara A. Foster, Adam R. Karpf

Lack of Evidence for Green Tea Polyphenols as DNA Methylation Inhibitors in Murine Prostate

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Jacob L. Glass, Melissa J. Fazzari, Anne C. Ferguson-Smith, John M. Greally

CG dinucleotide periodicities recognized by the Dnmt3a–Dnmt3L complex are distinctive at retroelements and imprinted domains

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Andrew S. McLellan, Robert A. Dubin, Qiang Jing, Shahina B. Maqbool, Raul Olea, Gael Westby, Pilib Ó. Broin, Melissa J. Fazzari, Deyou Zheng, Masako Suzuki, John M. Greally

Institutional Profile: The Einstein Center for Epigenomics: studying the role of epigenomic dysregulation in human disease

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Maria E. Figueroa, Lucy Skrabanek, Yushan Li, Anchalee Jiemjit, Tamer E. Fandy, Elisabeth Paietta, Hugo Fernandez, Martin S. Tallman, John M. Greally

, Hetty Carraway, Jonathan D. Licht, Steven D. Gore, Ari Melnick

MDS and secondary AML display unique patterns and abundance of aberrant DNA methylation

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Reid F. Thompson, Masako Suzuki, Kevin W. Lau, John M. Greally

A pipeline for the quantitative analysis of CG dinucleotide methylation using mass spectrometry

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Mayumi Oda, Jacob L. Glass, Reid F. Thompson, Yongkai Mo, Emmanuel N. Olivier, Maria E. Figueroa, Rebecca R. Selzer, Todd A. Richmond, Xinmin Zhang, Luke Dannenberg, Roland D. Green, Ari Melnick, Eli Hatchwell, Eric E. Bouhassira, Amit Verma and 2 other authors

High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers

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Maria E. Figueroa, Bas J. Wouters, Lucy Skrabanek, Jacob Glass, Yushan Li, Claudia A. J. Erpelinck-Verschueren, Anton W. Langerak, Bob Löwenberg, Melissa Fazzari, John M. Greally

, Peter J. M. Valk, Ari Melnick, Ruud Delwel

Genome-wide epigenetic analysis delineates a biologically distinct immature acute leukemia with myeloid/T-lymphoid features

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Mayumi Oda, John M. Greally

The Help Assay

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Maria E. Figueroa, Ari Melnick, John M. Greally

Genome-Wide Determination of DNA Methylation by Hpa II Tiny Fragment Enrichment by Ligation-Mediated PCR (HELP) for the Study of Acute Leukemias

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2008 John Greally

Journal club

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Eloisi C. Lopes, Ester Valls, Maria E. Figueroa, Alexander Mazur, Fan-Guo Meng, Gabriela Chiosis, Peter W. Laird, Nicole Schreiber-Agus, John M. Greally

, Egor Prokhortchouk, Ari Melnick

Kaiso Contributes to DNA Methylation-Dependent Silencing of Tumor Suppressor Genes in Colon Cancer Cell Lines

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Davendra Sohal, Andrew Yeatts, Kenny Ye

, Andrea Pellagatti, Li Zhou, Perry Pahanish, Yongkai Mo, Tushar Bhagat, John Mariadason

, Jacqueline Boultwood, Ari Melnick, John Greally

, Amit Verma

Meta-Analysis of Microarray Studies Reveals a Novel Hematopoietic Progenitor Cell Signature and Demonstrates Feasibility of Inter-Platform Data Integration

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Maria E. Figueroa, Mark Reimers, Reid F. Thompson, Kenny Ye

, Yushan Li, Rebecca R. Selzer, Jakob Fridriksson, Elisabeth Paietta, Peter Wiernik, Roland D. Green, John M. Greally

, Ari Melnick

An Integrative Genomic and Epigenomic Approach for the Study of Transcriptional Regulation

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Reid F. Thompson, Mark Reimers, Batbayar Khulan, Mathieu Gissot, Todd A. Richmond, Quan Chen, Xin Zheng, Kami Kim, John M. Greally

An analytical pipeline for genomic representations used for cytosine methylation studies

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Mathieu Gissot, Sang-Woon Choi, Reid F. Thompson, John M. Greally

, Kami Kim

Toxoplasma gondii and Cryptosporidium parvum Lack Detectable DNA Cytosine Methylation

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Jeffrey A. Jeddeloh, John M. Greally

, Oliver J. Rando

Reduced-representation methylation mapping

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Peter A. Jones, Trevor K. Archer, Stephen B. Baylin, Stephan Beck, Shelley Berger

, Bradley E. Bernstein, John D. Carpten, Susan J. Clark, Joseph F. Costello, Rebecca W. Doerge, Manel Esteller, Andrew P. Feinberg, Thomas R. Gingeras, John M. Greally

, Steven Henikoff and 19 other authors

Moving AHEAD with an international human epigenome project.

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2007 Eli Hatchwell, John M. Greally

The potential role of epigenomic dysregulation in complex human disease

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Jacob L. Glass, Reid F. Thompson, Batbayar Khulan, Maria E. Figueroa, Emmanuel N. Olivier, Erin J. Oakley, Gary Van Zant, Eric E. Bouhassira, Ari Melnick, Aaron Golden, Melissa J. Fazzari, John M. Greally

CG dinucleotide clustering is a species-specific property of the genome

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Papers authored by John Greally