All papers authored by Hashem Koohy
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Jaesung Huh,
Paul R. Buckley,
Myeongjun Jang,
Mariana Pereira Pinho ,
Ricardo A. Fernandes ,
Agne Antanaviciute,
Alison Simmons ,
Hashem Koohy
A robust deep learning workflow to predict CD8 + T-cell epitopes
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Agne Antanaviciute,
Kaushal Parikh,
Marta Jagielowicz,
Ana Sousa Gerós ,
Tarun Gupta,
Neil Ashley,
Doran Khamis,
Darren Fowler,
Edward Morrissey,
Chris Cunningham ,
Paul R. V. Johnson,
Hashem Koohy ,
Alison Simmons
Spatiotemporal analysis of human intestinal development at single-cell resolution
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Agne Antanaviciute ,
Tarun Gupta ,
David Fawkner-Corbett ,
Anna Aulicino ,
Marta Jagielowicz,
Kaushal Parikh ,
Emmanouela Repapi ,
Steve Taylor,
Dai Ishikawa ,
Ryo Hatano,
Taketo Yamada,
Wei Xin ,
Hubert Slawinski,
Rory Bowden
and 5 other authors
Single-cell atlas of colonic CD8+ T cells in ulcerative colitis
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In silico identification of vaccine targets for 2019-nCoV
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Natalina Elliott,
Siobhan Rice,
Gemma Buck,
Nicholas Fordham,
Catherine Garnett,
Laura Godfrey,
Nicholas T. Crump ,
Gary Wright,
Sarah Inglott,
Peng Hua ,
Bethan Psaila ,
Benjamin Povinelli,
David J. H. F. Knapp ,
Antonio Agraz-Doblas
and 13 other authors
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Marta Jagielowicz,
Anna Aulicino ,
Christoffer Lagerholm ,
Simon Davis,
James Kinchen,
Hannah H. Chen,
Nasullah Khalid Alham,
Neil Ashley,
Errin Johnson,
Philip Hublitz,
Leyuan Bao,
Joanna Lukomska
and 7 other authors
Colonic epithelial cell diversity in health and inflammatory bowel disease
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Neil Ashley,
Laura Cubitt,
Esther Mellado-Gomez,
Moustafa Attar,
Eshita Sharma,
Quin Wills,
Rory Bowden,
Felix C. Richter,
David Ahern
and 5 other authors
Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease
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Daniel J. Bolland,
Louise S. Matheson,
Stefan Schoenfelder,
Claudia Stellato,
Andrew Dimond,
Csilla Várnai ,
Peter Chovanec,
Tamara Chessa,
Jeremy Denizot,
Raquel Manzano Garcia ,
Steven W. Wingett,
Paula Freire-Pritchett,
Takashi Nagano,
Phillip Hawkins
and 6 other authors
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Anne E. Corcoran
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The rise and fall of machine learning methods in biomedical research
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Thomas A. Down,
Mikhail Spivakov ,
Tim Hubbard
A Comparison of Peak Callers Used for DNase-Seq Data
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Thomas A. Down,
Tim J. Hubbard
Chromatin Accessibility Data Sets Show Bias Due to Sequence Specificity of the DNase I Enzyme
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