All papers authored by Sophie N. Liu
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2023
Rudolf T. Pillich,
Jing Chen,
Christopher Churas,
Dylan Fong,
Trey Ideker 
,
Benjamin M. Gyori,
Sophie N. Liu ,
Klas Karis,
Keiichiro Ono,
Alexander Pico,
Dexter Pratt
,
Benjamin M. Gyori,
Sophie N. Liu ,
Klas Karis,
Keiichiro Ono,
Alexander Pico,
Dexter Pratt
NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange
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Sara Brin Rosenthal,
Sarah N. Wright ,
Sophie Liu ,
Christopher Churas,
Daisy Chilin-Fuentes,
Chi-Hua Chen,
Kathleen M. Fisch,
Dexter Pratt ,
Jason F. Kreisberg ,
Trey Ideker
,
Sophie Liu ,
Christopher Churas,
Daisy Chilin-Fuentes,
Chi-Hua Chen,
Kathleen M. Fisch,
Dexter Pratt ,
Jason F. Kreisberg ,
Trey Ideker
Mapping the common gene networks that underlie related diseases
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2021
Yue Qin ,
Edward L. Huttlin ,
Casper F. Winsnes ,
Maya L. Gosztyla ,
Ludivine Wacheul ,
Marcus R. Kelly,
Steven M. Blue ,
Fan Zheng,
Michael Chen,
Leah V. Schaffer,
Katherine Licon,
Anna Bäckström,
Laura Pontano Vaites,
John J. Lee ,
Wei Ouyang
and 13 other authors
,
Edward L. Huttlin ,
Casper F. Winsnes ,
Maya L. Gosztyla ,
Ludivine Wacheul ,
Marcus R. Kelly,
Steven M. Blue ,
Fan Zheng,
Michael Chen,
Leah V. Schaffer,
Katherine Licon,
Anna Bäckström,
Laura Pontano Vaites,
John J. Lee ,
Wei Ouyang
and 13 other authors
A multi-scale map of cell structure fusing protein images and interactions
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Fan Zheng ,
Marcus R. Kelly ,
Dana J. Ramms ,
Marissa L. Heintschel ,
Kai Tao,
Beril Tutuncuoglu ,
John J. Lee ,
Keiichiro Ono ,
Helene Foussard ,
Michael Chen ,
Kari A. Herrington ,
Erica Silva ,
Sophie N. Liu ,
Jing Chen,
Christopher Churas
and 17 other authors
,
Marcus R. Kelly ,
Dana J. Ramms ,
Marissa L. Heintschel ,
Kai Tao,
Beril Tutuncuoglu ,
John J. Lee ,
Keiichiro Ono ,
Helene Foussard ,
Michael Chen ,
Kari A. Herrington ,
Erica Silva ,
Sophie N. Liu ,
Jing Chen,
Christopher Churas
and 17 other authors
Interpretation of cancer mutations using a multiscale map of protein systems
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2020
Fan Zheng,
Laura Martin-Sancho,
Mary K. Lewinski,
Lars Pache,
Charlotte A. Stoneham,
Xin Yin ,
Mark E. Becker,
Dexter Pratt,
Christopher P. Churas,
Sara Brin Rosenthal,
P. D. de Jesus,
Sophie Liu ,
Stuart Weston,
Paul D. De Jesus,
Alan M. O’Neill
and 20 other authors
,
Mark E. Becker,
Dexter Pratt,
Christopher P. Churas,
Sara Brin Rosenthal,
P. D. de Jesus,
Sophie Liu ,
Stuart Weston,
Paul D. De Jesus,
Alan M. O’Neill
and 20 other authors
Functional Landscape of SARS-CoV-2 Cellular Restriction
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