Carlos Sánchez Casimiro-Soriguer

All papers authored by Carlos Sánchez Casimiro-Soriguer

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2024 Carlos S. Casimiro Soriguer

, Javier Perez-Florido, Enrique A. Robles, Maria Lara, Andrea Aguado, Manuel A. Rodriguez Iglesias, Jose A. Lepe, Federico Garcia, Monica Perez-Alegre, Eloisa Andujar, Victoria E. Jimenez, Lola P. Camino, Nicola Lorusso, Ulises Ameyugo, Isabel M. Vazquez and 3 other authors

SIEGA the integrated genomic surveillance system of Andalusia, a One Health regional resource connected with the clinic

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María Paniagua-García, Carlos S. Casimiro-Soriguer

, David Chinchón, Mª Dolores Navarro-Amuedo, Rafael Luque-Márquez, Enrique de Álava, Jose A. Lepe, José M. Cisneros

A case of fatal monkeypox infection: necropsy and molecular findings, with some considerations related to clinical management

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2023 Lydia Gálvez-Benítez

, José Manuel Ortiz de la Rosa, Angel Rodriguez-Villodres

, Carlos S. Casimiro-Soriguer

, Irene Molina-Panadero, Rocío Alvarez-Marin, Rémy A. Bonnin

, Thierry Naas

, Jerónimo Pachón

, José Miguel Cisneros, José Antonio Lepe

, Younes Smani

Role of blaTEM and OmpC in the piperacillin-tazobactam resistance evolution by E. coli in patients with complicated intra-abdominal infection

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Lydia Gálvez Benítez, José Manuel Ortiz De La Rosa, Ángel Rodríguez-Villodres, Carlos Casimiro-Soriguer

, Irene Molina-Panadero, Rocío Álvarez-Marín, Rémy Bonnin, Thierry Naas, Jerónimo Pachón, José Miguel Cisneros, José Lepe, Younes Smani

Genetic basis for in vivo piperacillin-tazobactam resistance

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José Manuel Ortiz de la Rosa, María Aznar Fernández, Ángel Rodríguez-Villodres, Carlos S. Casimiro-Soriguer

, Carlos Sánchez-Casimiro de Soriguer, José Miguel Cisneros, José Antonio Lepe

High-level delafloxacin resistance through the combination of two different mechanisms in Staphylococcus aureus

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Javier Perez-Florido, Carlos S. Casimiro-Soriguer

, Francisco Ortuño, Jose L. Fernandez-Rueda, Andrea Aguado, María Lara, Cristina Riazzo, Manuel A. Rodriguez-Iglesias, Pedro Camacho-Martinez, Laura Merino-Diaz, Inmaculada Pupo-Ledo, Adolfo de Salazar, Laura Viñuela, Ana Fuentes, Natalia Chueca and 3 other authors

Detection of High Level of Co-Infection and the Emergence of Novel SARS CoV-2 Delta-Omicron and Omicron-Omicron Recombinants in the Epidemiological Surveillance of Andalusia

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2022 José Manuel Ortiz de la Rosa, José Manuel Ortiz de la Rosa

, Ángel Rodríguez-Villodres

, Carlos S. Casimiro-Soriguer

, Maite Ruiz-Pérez De Pipaón, Maite Ruiz-Pérez De Pipaón

, Eduardo Briones, María Aznar Fernández, María Aznar Fernández, José Antonio Lepe

MDR Shigella sonnei in Spain: an ever-evolving emerging threat?

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Carlos Loucera

, Javier Perez-Florido, Carlos S. Casimiro-Soriguer

, Francisco M. Ortuño, Rosario Carmona, Gerrit Bostelmann, L. Javier Martínez González, Luis Javier Martínez-González, Dolores Muñoyerro-Muñiz, Román Villegas, Jesus Rodriguez-Baño, Manuel Romero-Gomez, Nicola Lorusso, García León Fj, Adolfo de Salazar and 10 other authors

Assessing the Impact of SARS-CoV-2 Lineages and Mutations on Patient Survival

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Carlos S. Casimiro-Soriguer

, Carlos Loucera, María Peña-Chilet, Joaquin Dopazo

Towards a metagenomics machine learning interpretable model for understanding the transition from adenoma to colorectal cancer

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2021 Carlos Sánchez Casimiro-Soriguer

Highly accurate whole-genome imputation of SARS-CoV-2 from partial or low-quality sequences.

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Eder Orlando Méndez-Salazar, Janitzia Vázquez-Mellado, Carlos S. Casimiro-Soriguer

, Joaquin Dopazo, Cankut Çubuk, Yessica Zamudio-Cuevas, Adriana Francisco-Balderas, Karina Martínez-Flores, Javier Fernández-Torres, Carlos Lozada-Pérez, Carlos Pineda, Austreberto Sánchez-González, Luis H. Silveira, Ana I. Burguete-García, Citlalli Orbe-Orihuela and 5 other authors

Taxonomic variations in the gut microbiome of gout patients with and without tophi might have a functional impact on urate metabolism

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Carlos S. Casimiro-Soriguer

, Javier Perez-Florido, Jose L. Fernandez-Rueda, Irene Pedrosa-Corral

, Vicente Guillot-Sulay, Nicola Lorusso, Luis Javier Martinez-Gonzalez

, Jose M. Navarro-Marí

, Joaquin Dopazo

, Sara Sanbonmatsu-Gámez

Phylogenetic Analysis of the 2020 West Nile Virus (WNV) Outbreak in Andalusia (Spain)

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Francisco M. Ortuño, Carlos Loucera

, Carlos S. Casimiro Soriguer

, Jose A. Lepe, Pedro Camacho Martinez, Laura Merino Diaz, Adolfo de Salazar, Natalia Chueca, Federico García, Javier Perez-Florido, Joaquin Dopazo

From partial to whole genome imputation of SARS-CoV-2 for epidemiological surveillance

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Leticia Villalba-Benito, Daniel López-López, Ana Torroglosa, Carlos S. Casimiro-Soriguer

, Berta Luzón-Toro, Raquel María Fernández, María José Moya-Jiménez, Guillermo Antiñolo, Joaquín Dopazo, Salud Borrego

Genome-wide analysis of DNA methylation in Hirschsprung enteric precursor cells: unraveling the epigenetic landscape of enteric nervous system development

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2020 C. S. Casimiro-Soriguer

, M. M. Rigual, A. M. Brokate-Llanos, M. J. Muñoz, A. Garzón, A. J. Pérez-Pulido

, J. Jimenez

Using AnABlast for intergenic sORF prediction in the Caenorhabditis elegans genome

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Carlos S. Casimiro-Soriguer

, Alejandro Rubio, Juan Jimenez, Antonio J. Pérez-Pulido

Ancient evolutionary signals of protein-coding sequences allow the discovery of new genes in the Drosophila melanogaster genome

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Gema Labrador-Herrera, Antonio J. Pérez-Pulido, Rocío Álvarez-Marín, Carlos S. Casimiro-Soriguer

, Tania Cebrero-Cangueiro, Jorgelina Morán-Barrio, Jerónimo Pachón, Alejandro M. Viale, María Eugenia Pachón-Ibáñez

Virulence role of the outer membrane protein CarO in carbapenem-resistant Acinetobacter baumannii

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2019 Carlos S. Casimiro-Soriguer

, Javier Perez Florido, Daniel López-López, Carlos Loucera

, Joaquin Dopazo

Antibiotic resistance and metabolic profiles as functional biomarkers that accurately predict the geographic origin of city metagenomics samples

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Beatriz Calero-Delgado, Antonio J. Pérez-Pulido, Antonio Benítez-Cabello, Antonio M. Martín-Platero, Carlos S. Casimiro-Soriguer

, Manuel Martínez-Bueno, Francisco Noé Arroyo-López, Rufino Jiménez Díaz

Multiple Genome Sequences of Lactobacillus pentosus Strains Isolated from Biofilms on the Skin of Fermented Green Table Olives

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Alejandro Rubio, Carlos S. Casimiro-Soriguer

, Pablo Mier, Miguel A. Andrade-Navarro, Andrés Garzón, Juan Jimenez, Antonio J. Pérez-Pulido

AnABlast: Re-searching for Protein-Coding Sequences in Genomic Regions

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All papers authored by Carlos Sánchez Casimiro-Soriguer