Slim Karkar - Dissemin

All papers authored by Slim Karkar

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2024 Johanna Galvis, Joris Guyon, Benjamin Dartigues, Helge Hecht, Björn Grüning, Florian Specque, Hayssam Soueidan, Slim Karkar

, Thomas Daubon, Macha Nikolski

DIMet: An open-source tool for Differential analysis of targeted Isotope-labeled Metabolomics data

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2023 Slim Karkar

RNA-Seq, raw count

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Corentin Thuilliez, Gael Moquin-Beaudry, Pierre Khneisser, Maria Eugenia Marques Da Costa, Slim Karkar

, Hanane Boudhouche, Damien Drubay, Baptiste Audinot, Birgit Geoerger, Jean-Yves Scoazec, Nathalie Gaspar, Antonin Marchais

CellsFromSpace: A versatile tool for spatial transcriptomic data analysis with reference-free deconvolution and guided cell type/activity annotation

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This paper is made freely available by the publisher.

2022 Joris Guyon

, Ignacio Fernandez‐Moncada, Claire M. Larrieu

, Cyrielle L. Bouchez, Antonio C. Pagano Zottola, Johanna Galvis, Tiffanie Chouleur

, Audrey Burban, Kevin Joseph

, Vidhya M. Ravi

, Heidi Espedal

, Gro Vatne Røsland

, Boutaina Daher, Aurélien Barre, Benjamin Dartigues and 17 other authors

Lactate dehydrogenases promote glioblastoma growth and invasion via a metabolic symbiosis

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2021 Slim Karkar

, Claire Dandine-Roulland

, Jean-François Mangin, Yann Le Guen, Yann Le Guen, Cathy Philippe

, Jean-François Deleuze, Morgane Pierre-Jean, Edith Le Floch, Edith Le Floch, Vincent Frouin

Genome-wide haplotype association study in imaging genetics using whole-brain sulcal openings of 16,304 UK Biobank subjects

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2019 Slim Karkar

, Lauren E. Alfonse, Catherine M. Grgicak, Desmond S. Lun

Statistical modeling of STR capillary electrophoresis signal

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Yann Le Guen

, Slim Karkar

, Antoine Grigis, Cathy Philippe

, Jean-Francois Mangin, Vincent Frouin

Heritability of surface area and cortical thickness: a comparison between the Human Connectome Project and the UK Biobank dataset

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2018 Slim Karkar

, Yann Le Guen, Cathy Philippe, Claire Dandine-Roulland, Morgane Pierre-Jean, Jean-Francois Mangin, Edith Le Floch, Vincent Frouin

A study of feasibility for genome-wide haplotype association of complex traits in imaging genetics

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Slim Karkar

, Lauren E. Alfonse, Catherine M. Grgicak, Desmond S. Lun

Statistical Modeling of Short-Tandem Repeat Capillary Electrophoresis Profiles

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Eduardo Corel

, Jananan S. Pathmanathan, Andrew K. Watson, Slim Karkar

, Philippe Lopez, Eric Bapteste

MultiTwin: A Software Suite to Analyze Evolution at Multiple Levels of Organization Using Multipartite Graphs

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2015 Slim Karkar

, Fabio Facchinelli, Dana C. Price, Andreas P. M. Weber, Debashish Bhattacharya

Metabolic connectivity as a driver of host and endosymbiont integration

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Arye Harel, Slim Karkar

, Shu Cheng, Paul G. Falkowski, Debashish Bhattacharya

Deciphering Primordial Cyanobacterial Genome Functions from Protein Network Analysis

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Dominik Forster, Lucie Bittner, Slim Karkar

, Micah Dunthorn, Sarah Romac, Stéphane Audic, Philippe Lopez, Thorsten Stoeck, Eric Bapteste

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms

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2014 Shu Cheng, Slim Karkar

, Eric Bapteste, Nathan Yee, Paul Falkowski, Debashish Bhattacharya

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Shu Cheng, Dana C. Price, Slim Karkar

, Debashish Bhattacharya

Exploring Biotic Interactions Within Protist Cell Populations Using Network Methods

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2009 S. Karkar

, S. Faisan, L. Thoraval, J. R. Foucher

A multi-level parcellation approach for brain functional connectivity analysis

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All papers authored by Slim Karkar