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All papers authored by Keith Crandall

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2023 Allison C. Sylvetsky

ORCID

, Rebecca A. Clement, Nathaniel Stearrett, Najy T. Issa, Fiona J. Dore, Raja Mazumder, Charles Hadley King

ORCID

, Monica J. Hubal, Peter J. Walter, Hongyi Cai, Sabyasachi Sen, Kristina I. Rother, Keith A. Crandall

ORCID

Consumption of sucralose- and acesulfame-potassium-containing diet soda alters the relative abundance of microbial taxa at the species level: findings of two pilot studies

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2022 Mara K. N. Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh

ORCID

, Xiaofeng Wei, John M. Archibald

ORCID

, William J. Baker

ORCID

, Katherine Belov, Mark L. Blaxter, Tomas Marques Bonet

ORCID

, Anna K. Childers

ORCID

, Jonathan A. Coddington

ORCID

, Keith A. Crandall

ORCID

, Andrew J. Crawford, Robert P. Davey and 30 other authors

Standards recommendations for the Earth BioGenome Project

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James P. Bernot

ORCID

, Pavel Avdeyev

ORCID

, Anton Zamyatin

ORCID

, Niklas Dreyer

ORCID

, Nikita Alexeev

ORCID

, Marcos Pérez-Losada

ORCID

, Keith A. Crandall

ORCID

Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes

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2021 Margaret C. Steiner

ORCID

, Jez L. Marston, Luis P. Iñiguez

ORCID

, Matthew L. Bendall

ORCID

, Katherine B. Chiappinelli, Douglas F. Nixon

ORCID

, Keith A. Crandall

ORCID

Locus-Specific Characterization of Human Endogenous Retrovirus Expression in Prostate, Breast, and Colon Cancers

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2020 Carla Mavian

ORCID

, Sergei Kosakovsky Pond, Simone Marini, Brittany Rife Magalis

ORCID

, Anne-Mieke Vandamme, Simon Dellicour, Samuel V. Scarpino

ORCID

, Charlotte Houldcroft

ORCID

, Julian Villabona-Arenas, Taylor K. Paisie

ORCID

, Nídia S. Trovão

ORCID

, Christina Boucher, Yun Zhang, Richard H. Scheuermann, Olivier Gascuel and 21 other authors

Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

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2019 Luis P. Iñiguez

ORCID

, Miguel de Mulder Rougvie, Nathaniel Stearrett, Richard B. Jones, Christopher E. Ormsby

ORCID

, Gustavo Reyes-Terán, Keith A. Crandall

ORCID

, Douglas F. Nixon

ORCID

, Matthew L. Bendall

ORCID

Transcriptomic analysis of human endogenous retroviruses in systemic lupus erythematosus

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2018 Charles Hadley King

ORCID

, Hiral Desai, Allison C. Sylvetsky, Jonathan LoTempio

ORCID

, Shant Ayanyan, Jill Carrie, Keith A. Crandall

ORCID

, Brian C. Fochtman, Lusine Gasparyan, Naila Gulzar, Paul Howell, Najy Issa, Konstantinos Krampis, Lopa Mishra, Hiroki Morizono and 8 other authors

Baseline human gut microbiota profile in healthy people and standard reporting template

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Alan Deidun

ORCID

, Arnold Sciberras, Justin Formosa, Bruno Zava, Gianni Insacco, Maria Corsini-Foka, Keith A. Crandall

ORCID

Invasion by non-indigenous freshwater decapods of Malta and Sicily, central Mediterranean Sea

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Matthew L. Bendall

ORCID

, Miguel de Mulder

ORCID

, Luis Pedro Iñiguez

ORCID

, Aarón Lecanda-Sánchez, Marcos Pérez-Losada, Mario A. Ostrowski

ORCID

, Richard Brad Jones, Lubbertus C. F. Mulder, Gustavo Reyes-Terán, Keith A. Crandall

ORCID

, Christopher E. Ormsby, Douglas F. Nixon

ORCID

Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expression

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Liam Spurr

ORCID

, Muzi Li, Nawaf Alomran, Qianqian Zhang, Paula Restrepo

ORCID

, Mercedeh Movassagh, Chris Trenkov, Nerissa Tunnessen, Tatiyana Apanasovich, Keith A. Crandall

ORCID

, Nathan Edwards, Anelia Horvath

ORCID

Systematic pan-cancer analysis of somatic allele frequency

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Harry ten Hove, Jan J. ter Poorten, Sancia Et van der Meij

ORCID

, Ton van Haaren, Les Watling, Matthew Wayland

ORCID

, Christopher Whipps, Gary Williams, Robin Wilson, Moriaki Yasuhara, Joana Zanol, Wolfgang Zeidler, Francisco Hernandez, Bart Vanhoorne, Leen Vandepitte and 229 other authors

Research Infrastructures offer capacity to address scientific questions never attempted before: Are all taxa equal?

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2017 Paula Restrepo

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, Mercedeh Movassagh, Nawaf Alomran, Christian Miller, Muzi Li, Chris Trenkov, Yulian Manchev, Sonali Bahl, Stephanie Warnken

ORCID

, Tatiyana Apanasovich, Liam Spurr

ORCID

, Keith Crandall

ORCID

, Nathan Edwards, Anelia Horvath

ORCID

Overexpressed somatic alleles are enriched in functional elements in Breast Cancer

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David B. Stern, Eduardo Castro Nallar

ORCID

, Jason Rathod, Keith A. Crandall

ORCID

DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants

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Marcos Pérez-Losada, Lamia Alamri, Keith A. Crandall

ORCID

, Robert J. Freishtat

ORCID

Nasopharyngeal Microbiome Diversity Changes over Time in Children with Asthma

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2016 Keith A Crandall

ORCID

Collecting and processing freshwater crayfishes

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Marcos Pérez-Losada, Keith A. Crandall

ORCID

, Robert J. Freishtat

ORCID

Two sampling methods yield distinct microbial signatures in the nasopharynges of asthmatic children

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Sarah K. Hilton, Eduardo Castro-Nallar

ORCID

, Marcos Pérez-Losada, Ian Toma, Timothy A. McCaffrey, Eric P. Hoffman, Marc O. Siegel, Gary L. Simon, W. Evan Johnson, Keith A. Crandall

ORCID

Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology

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Ying Sun, Yu Huang, Xiaofeng Li, Carole C. Baldwin, Zhuocheng Zhou, Zhixiang Yan, Keith A. Crandall

ORCID

, Yong Zhang, Xiaomeng Zhao, Min Wang, Alex Wong, Chao Fang, Xinhui Zhang, Hai Huang, Jose V. Lopez and 4 other authors

Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies

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Tadashi Kawai, Keith A. Crandall

ORCID

Global Diversity and Conservation of Freshwater Crayfish (Crustacea: Decapoda: Astacoidea)

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2015 John S. Sproul, Derek D. Houston, C. Riley Nelson, C. Riley Nelson, R. Paul Evans, R. Paul Evans, Keith A. Crandall

ORCID

, Dennis K. Shiozawa

Climate oscillations, glacial refugia, and dispersal ability: Factors influencing the genetic structure of the least salmonfly, Pteronarcella badia (Plecoptera), in Western North America

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