All papers authored by Martin Golebiewski
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2023
Rudolf Wittner 
,
Petr Holub ,
Cecilia Mascia ,
Francesca Frexia ,
Heimo Müller ,
Markus Plass ,
Clare Allocca ,
Fay Betsou ,
Tony Burdett,
Ibon Cancio ,
Adriane Chapman,
Martin Chapman ,
Mélanie Courtot ,
Vasa Curcin ,
Johann Eder
and 21 other authors
,
Petr Holub ,
Cecilia Mascia ,
Francesca Frexia ,
Heimo Müller ,
Markus Plass ,
Clare Allocca ,
Fay Betsou ,
Tony Burdett,
Ibon Cancio ,
Adriane Chapman,
Martin Chapman ,
Mélanie Courtot ,
Vasa Curcin ,
Johann Eder
and 21 other authors
Toward a common standard for data and specimen provenance in life sciences
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Matthias König ,
Padraig Gleeson ,
Martin Golebiewski ,
Thomas E. Gorochowski ,
Michael Hucka ,
Sarah M. Keating ,
Chris J. Myers,
David P. Nickerson ,
Björn Sommer,
Dagmar Waltemath ,
Falk Schreiber
Download from doi.org
,
Padraig Gleeson ,
Martin Golebiewski ,
Thomas E. Gorochowski ,
Michael Hucka ,
Sarah M. Keating ,
Chris J. Myers,
David P. Nickerson ,
Björn Sommer,
Dagmar Waltemath ,
Falk Schreiber
Download from doi.org
2022
Vitor Martins dos Santos,
Mihail Anton ,
Barbara Szomolay,
Marek Ostaszewski,
Ilja Arts,
Rui Benfeitas,
Victoria Dominguez Del Angel ,
Elena Domínguez-Romero,
Polonca Ferk,
Dirk Fey,
Carole Goble,
Martin Golebiewski ,
Kristina Gruden,
Katharina F. Heil ,
Henning Hermjakob
and 23 other authors
,
Barbara Szomolay,
Marek Ostaszewski,
Ilja Arts,
Rui Benfeitas,
Victoria Dominguez Del Angel ,
Elena Domínguez-Romero,
Polonca Ferk,
Dirk Fey,
Carole Goble,
Martin Golebiewski ,
Kristina Gruden,
Katharina F. Heil ,
Henning Hermjakob
and 23 other authors
Systems Biology in ELIXIR: modelling in the spotlight
Download from doi.org
2021
Julian Matschinske,
Nicolas Alcaraz,
Arriel Benis ,
Martin Golebiewski ,
Dominik G. Grimm ,
Lukas Heumos ,
Tim Kacprowski ,
Olga Lazareva,
Markus List ,
Zakaria Louadi,
Josch K. Pauling,
Nico Pfeifer,
Richard Röttger,
Veit Schwämmle ,
Gregor Sturm
and 10 other authors
,
Martin Golebiewski ,
Dominik G. Grimm ,
Lukas Heumos ,
Tim Kacprowski ,
Olga Lazareva,
Markus List ,
Zakaria Louadi,
Josch K. Pauling,
Nico Pfeifer,
Richard Röttger,
Veit Schwämmle ,
Gregor Sturm
and 10 other authors
The AIMe registry for artificial intelligence in biomedical research
Download from www.nature.com
2020
Dagmar Waltemath ,
Martin Golebiewski ,
Michael L. Blinov ,
Padraig Gleeson ,
Henning Hermjakob ,
Michael Hucka ,
Esther Thea Inau ,
Sarah M. Keating ,
Matthias König ,
Olga Krebs ,
Rahuman S. Malik-Sheriff ,
David Nickerson ,
Ernst Oberortner,
Herbert M. Sauro ,
Falk Schreiber
and 4 other authors
Download from doi.org
,
Martin Golebiewski ,
Michael L. Blinov ,
Padraig Gleeson ,
Henning Hermjakob ,
Michael Hucka ,
Esther Thea Inau ,
Sarah M. Keating ,
Matthias König ,
Olga Krebs ,
Rahuman S. Malik-Sheriff ,
David Nickerson ,
Ernst Oberortner,
Herbert M. Sauro ,
Falk Schreiber
and 4 other authors
Download from doi.org
2018
Susanna-Assunta Sansone ,
Peter McQuilton ,
Philippe Rocca-Serra ,
Marina Soares e. Silva ,
Alejandra Gonzalez-Beltran ,
Massimiliano Izzo ,
Milo Thurston ,
Allyson Lister ,
Jessica Tenenbaum ,
Simon Hodson ,
Dominique Batista ,
Rebecca Lawrence,
Varsha Khodiyar ,
Ramon Granell ,
J. Myles Axton
and 56 other authors
,
Peter McQuilton ,
Philippe Rocca-Serra ,
Marina Soares e. Silva ,
Alejandra Gonzalez-Beltran ,
Massimiliano Izzo ,
Milo Thurston ,
Allyson Lister ,
Jessica Tenenbaum ,
Simon Hodson ,
Dominique Batista ,
Rebecca Lawrence,
Varsha Khodiyar ,
Ramon Granell ,
J. Myles Axton
and 56 other authors
FAIRsharing, a cohesive community approach to the growth in standards, repositories and policies
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2015
Natalie J. Stanford,
Katherine Wolstencroft,
Martin Golebiewski ,
Renate Kania,
Nick Juty,
Christopher Tomlinson,
Stuart Owen,
Sarah Butcher,
Henning Hermjakob,
Nicolas Le Novere,
Nicolas Le Novère,
Wolfgang Mueller,
Jacky Snoep,
Carole Goble
,
Renate Kania,
Nick Juty,
Christopher Tomlinson,
Stuart Owen,
Sarah Butcher,
Henning Hermjakob,
Nicolas Le Novere,
Nicolas Le Novère,
Wolfgang Mueller,
Jacky Snoep,
Carole Goble
The evolution of standards and data management practices in systems biology
Download from doi.org
Katherine Wolstencroft,
Stuart Owen,
Olga Krebs,
Quyen Nguyen,
Natalie J. Stanford,
Martin Golebiewski ,
Andreas Weidemann,
Meik Bittkowski,
Lihua An,
David Shockley,
Jacky L. Snoep ,
Wolfgang Mueller,
Carole Goble
,
Andreas Weidemann,
Meik Bittkowski,
Lihua An,
David Shockley,
Jacky L. Snoep ,
Wolfgang Mueller,
Carole Goble
SEEK: A systems biology data and model management platform
Download from link.springer.com
Michael Hucka,
David P. Nickerson,
Gary D. Bader,
Frank T. Bergmann,
Jonathan Cooper,
Emek Demir,
Alan Gamy,
Alan Garny,
Martin Golebiewski ,
Chris J. Myers,
Falk Schreiber,
Dagmar Waltemath,
Nicolas Le Novère,
Nicolas Le Novère
Download from dx.doi.org
,
Chris J. Myers,
Falk Schreiber,
Dagmar Waltemath,
Nicolas Le Novère,
Nicolas Le Novère
Download from dx.doi.org
2014
Frank T. Bergmann,
Bergmann Ft,
Richard Adams ,
Stuart Moodie,
Jonathan Cooper ,
Mihai Glont,
Martin Golebiewski ,
Michael Hucka,
Camille Laibe ,
Miller Ak,
Andrew K. Miller,
David P. Nickerson,
Nickerson Dp,
Brett G. Olivier,
Olivier Bg
and 9 other authors
,
Stuart Moodie,
Jonathan Cooper ,
Mihai Glont,
Martin Golebiewski ,
Michael Hucka,
Camille Laibe ,
Miller Ak,
Andrew K. Miller,
David P. Nickerson,
Nickerson Dp,
Brett G. Olivier,
Olivier Bg
and 9 other authors
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project
Download from link.springer.com
Ulrike Wittig ,
Renate Kania,
Meik Bittkowski,
Elina Wetsch,
Lei Shi,
Lenneke Jong ,
Martin Golebiewski ,
Maja Rey,
Andreas Weidemann,
Isabel Rojas,
Wolfgang Müller
,
Renate Kania,
Meik Bittkowski,
Elina Wetsch,
Lei Shi,
Lenneke Jong ,
Martin Golebiewski ,
Maja Rey,
Andreas Weidemann,
Isabel Rojas,
Wolfgang Müller
Data extraction for the reaction kinetics database SABIO-RK
Download from doi.org
Dagmar Waltemath,
Nicolas Le Novère,
Bergmann Ft,
Frank T. Bergmann,
Claudine Chaouiya,
Tobias Czauderna ,
Padraig Gleeson,
Carole Goble,
Michael Hucka,
Martin Golebiewski ,
Nick Juty,
Olga Krebs,
Nicolas Le Novere,
Huaiyu Mi,
Ion I. Moraru
and 11 other authors
,
Padraig Gleeson,
Carole Goble,
Michael Hucka,
Martin Golebiewski ,
Nick Juty,
Olga Krebs,
Nicolas Le Novere,
Huaiyu Mi,
Ion I. Moraru
and 11 other authors
Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)
Download from doi.org
2013
Ulrike Wittig ,
Maja Rey,
Renate Kania,
Meik Bittkowski,
Lei Shi,
Martin Golebiewski ,
Andreas Weidemann,
Wolfgang Müller,
Isabel Rojas
,
Maja Rey,
Renate Kania,
Meik Bittkowski,
Lei Shi,
Martin Golebiewski ,
Andreas Weidemann,
Wolfgang Müller,
Isabel Rojas
Challenges for an enzymatic reaction kinetics database
Download from onlinelibrary.wiley.com
Finja Büchel,
Nicolas Rodriguez ,
Neil Swainston,
Clemens Wrzodek,
Tobias Czauderna ,
Roland Keller,
Florian Mittag,
Michael Schubert,
Mihai Glont,
Martin Golebiewski ,
Martijn van Iersel,
Sarah Keating,
Matthias Rall,
Michael Wybrow,
Henning Hermjakob
and 12 other authors
,
Neil Swainston,
Clemens Wrzodek,
Tobias Czauderna ,
Roland Keller,
Florian Mittag,
Michael Schubert,
Mihai Glont,
Martin Golebiewski ,
Martijn van Iersel,
Sarah Keating,
Matthias Rall,
Michael Wybrow,
Henning Hermjakob
and 12 other authors
Path2Models: large-scale generation of computational models from biochemical pathway maps
Download from link.springer.com
2011
Ulrike Wittig ,
Renate Kania,
Martin Golebiewski ,
Maja Rey,
Lei Shi,
Lenneke Jong ,
Enkhjargal Algaa,
Andreas Weidemann,
Heidrun Sauer-Danzwith,
Saqib Mir ,
Olga Krebs,
Meik Bittkowski,
Elina Wetsch,
Isabel Rojas,
Wolfgang Müller
,
Renate Kania,
Martin Golebiewski ,
Maja Rey,
Lei Shi,
Lenneke Jong ,
Enkhjargal Algaa,
Andreas Weidemann,
Heidrun Sauer-Danzwith,
Saqib Mir ,
Olga Krebs,
Meik Bittkowski,
Elina Wetsch,
Isabel Rojas,
Wolfgang Müller
SABIO-RK—database for biochemical reaction kinetics
Download from doi.org
Mélanie Juty N. Knupfer C. Waltemath D. Zhukova A. Drager A. Dumontier M. Finney A. Golebiewski M. Hastings J. Hoops S. Keating S. Kell D. B. Kerrien S. Lawson J. Lister A. Lu J. Machne R. Mendes P. Pocock M. Rodriguez N. Villeger A. Wilkinson D. J. Wimala Courtot,
Nick Juty,
Christian Knüpfer,
Dagmar Waltemath,
Anna Zhukova,
Andreas Dräger ,
Michel Dumontier ,
Andrew Finney,
Martin Golebiewski ,
Janna Hastings,
Stefan Hoops,
Sarah Keating,
Douglas B. Kell,
Samuel Kerrien,
James Lawson
and 13 other authors
,
Michel Dumontier ,
Andrew Finney,
Martin Golebiewski ,
Janna Hastings,
Stefan Hoops,
Sarah Keating,
Douglas B. Kell,
Samuel Kerrien,
James Lawson
and 13 other authors
Controlled vocabularies and semantics in systems biology
Download from onlinelibrary.wiley.com
2009
Jasmin Šarić,
Martin Golebiewski ,
Ulrike Wittig,
Henriette Engelken,
Meik Bittkowski,
Henriette Slogsnat,
Jasmin Saric,
Wolfgang Müller,
Isabel Rojas
,
Ulrike Wittig,
Henriette Engelken,
Meik Bittkowski,
Henriette Slogsnat,
Jasmin Saric,
Wolfgang Müller,
Isabel Rojas
Normalization and Matching of Chemical Compound Names
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Andreas Dräger ,
Hannes Planatscher,
Dieudonné Motsou Wouamba,
Dieudonne Motsou Wouamba,
Adrian Schröder,
Michael Hucka,
Lukas Endler ,
Martin Golebiewski ,
Wolfgang Müller,
Andreas Zell
,
Hannes Planatscher,
Dieudonné Motsou Wouamba,
Dieudonne Motsou Wouamba,
Adrian Schröder,
Michael Hucka,
Lukas Endler ,
Martin Golebiewski ,
Wolfgang Müller,
Andreas Zell
SBML2LaTeX: conversion of SBML files into human-readable reports
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