Fiona Brinkman - Dissemin

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Papers authored by Fiona Brinkman

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2017 Michael A. Peabody, Jason A. Caravas, Shatavia S. Morrison, Jeffrey W. Mercante, Natalie A. Prystajecky, Brian H. Raphael, Fiona S. L. Brinkman

ORCID

Characterization of Legionella Species from Watersheds in British Columbia, Canada

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Emma Griffiths, Damion Dooley

ORCID

, Morag Graham, Gary Van Domselaar, Fiona S. L. Brinkman

ORCID

, William W. L. Hsiao

Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance

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Aaron Petkau, Philip Mabon, Cameron Sieffert, Natalie C. Knox, Jennifer Cabral, Mariam Iskander, Mark Iskander, Kelly Weedmark, Rahat Zaheer, Lee S. Katz, Katz Ls, Celine Nadon, Aleisha Reimer, Robert G. Beiko, Eduardo Taboada and 6 other authors

SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology

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Dominic Lambert, Arthur Pightling, Emma Griffiths, Gary Van Domselaar, Peter Evans, Sharon Berthelet, Duncan Craig, P. Scott Chandry, Robert Stones, Fiona Brinkman

ORCID

, Alexandre Angers-Loustau

ORCID

, Joachim Kreysa, Weida Tong, Burton Blais

Baseline Practices for the Application of Genomic Data Supporting Regulatory Food Safety

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Patricia Hingston, Jessica Chen, Bhavjinder K. Dhillon, Chad Laing, Claire Bertelli, Victor Gannon, Taurai Tasara, Kevin Allen, Fiona S. L. Brinkman

ORCID

, Lisbeth Truelstrup Hansen, Siyun Wang

Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress

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Kyla A. McKay, Kaarina Kowalec, Fiona Brinkman

ORCID

, B. Brett Finlay, Marc Horwitz, Amee R. Manges, Lisa Osborne, Helen Tremlett

From bugs to brains: The microbiome in neurological health

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2016 Baofeng Jia, Amogelang R. Raphenya, Brian Alcock, Nicholas Waglechner, Peiyao Guo, Kara K. Tsang, Briony A. Lago, Biren M. Dave, Sheldon Pereira, Arjun N. Sharma, Sachin Doshi, Mélanie Courtot, Raymond Lo, Laura E. Williams, Jonathan G. Frye and 8 other authors

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

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Heather L. Osachoff, Lorraine L. Y. Brown, Leena Tirrul, Graham C. van Aggelen, Fiona S. L. Brinkman

ORCID

, Christopher J. Kennedy

Time course of hepatic gene expression and plasma vitellogenin protein concentrations in estrone-exposed juvenile rainbow trout (Oncorhynchus mykiss)

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Miguel I. Uyaguari-Diaz, Michael Chan, Bonnie L. Chaban, Matthew A. Croxen, Jan F. Finke, Janet E. Hill, Michael A. Peabody, Thea Van Rossum

ORCID

, Curtis A. Suttle, Fiona S. L. Brinkman

ORCID

, Judith Isaac-Renton, Natalie A. Prystajecky, Patrick Tang

A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples

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Ruth R. Miller, Morgan G. I. Langille, Vincent Montoya, Anamaria Crisan, Aleksandra Stefanovic, Irene Martin, Linda Hoang

ORCID

, David M. Patrick, Marc Romney, Gregory Tyrrell, Steven J. M. Jones, Fiona S. L. Brinkman

ORCID

, Patrick Tang

Genomic Analysis of a Serotype 5Streptococcus pneumoniaeOutbreak in British Columbia, Canada, 2005–2009

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2015 Thea Van Rossum

ORCID

, Michael A. Peabody, Miguel I. Uyaguari Diaz, Kirby I. Cronin, Michael Chan, Jared R. Slobodan, Matthew J. Nesbitt, Curtis A. Suttle, William W. L. Hsiao, Patrick K. C. Tang, Natalie A. Prystajecky, Fiona S. L. Brinkman

ORCID

Year-Long Metagenomic Study of River Microbiomes Across Land Use and Water Quality

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Michael A. Peabody

ORCID

, Matthew R. Laird, Caitlyn Vlasschaert

ORCID

, Raymond Lo, Fiona S. L. Brinkman

ORCID

PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures

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Geoffrey L. Winsor

ORCID

, Emma J. Griffiths, Raymond Lo, Bhavjinder K. Dhillon, Julie A. Shay, Fiona S. L. Brinkman

ORCID

Enhanced annotations and features for comparing thousands ofPseudomonasgenomes in the Pseudomonas genome database

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Michael A. Peabody, Thea Van Rossum

ORCID

, Raymond Lo, Fiona S. L. Brinkman

ORCID

Evaluation of shotgun metagenomics sequence classification methods using in silico and in vitro simulated communities

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Luca Freschi, Julie Jeukens, Irena Kukavica-Ibrulj, Brian Boyle, Marie-Josée Dupont, Jérôme Laroche, Stéphane Larose, Halim Maaroufi, Joanne L. Fothergill, Matthew Moore, Geoffrey L. Winsor, Shawn D. Aaron, Jean Barbeau, Scott C. Bell, Jane L. Burns and 44 other authors

Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

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Matthew R. Laird, Morgan G. I. Langille, Fiona S. L. Brinkman

ORCID

GenomeD3Plot: A library for rich, interactive visualizations of genomic data in web applications

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Bhavjinder K. Dhillon, Matthew R. Laird, Julie A. Shay, Geoffrey L. Winsor, Raymond Lo, Fazmin Nizam, Sheldon K. Pereira, Nicholas Waglechner, Andrew G. McArthur

ORCID

, Morgan G. I. Langille, Fiona S. L. Brinkman

ORCID

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1.

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Silvia Frias, Kenneth Bryan, Fiona S. L. Brinkman

ORCID

, David J. Lynn

CerebralWeb: a Cytoscape.js plug-in to visualize networks stratified by subcellular localization

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Olaf Mercier

ORCID

, Fiona Brinkman

ORCID

, Simon Rousseau

ORCID

Congres quebecois en sante respiratoire, 6 et 7 novembre 2014 • Montreal, Quebec.

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2014 Kieran C. O’Doherty, Josh D. Neufeld, Fiona S. L. Brinkman

ORCID

, Humphrey Gardner, David S. Guttman, Robert G. Beiko

Conservation and stewardship of the human microbiome

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