Leonardo Lima - Dissemin

All papers authored by Leonardo Lima

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2023 Leonardo Lima, Thaís P. P. De Souza, Letícia Xavier Silva Cantão, Daniel Bonoto Gonçalves, Marina Quádrio Raposo Branco Rodrigues, Ronaldo Alves Pinto Nagem, 4. Daniel Bonoto Gonçalves, Leonardo Henrique França de Lima

, Rafael Eduardo Oliveira Rocha

, Renato Ramos Godoi, William James Nogueira Lima, Alexsandro Sobreira Galdino, Raquel Cardoso de Melo Minardi, Raquel Cardoso De Melo Minardi

Glycosylation and charge distribution orchestrates the conformational ensembles of a biotechnologically promissory phytase in different pHs – A computational study

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Leonardo Lima

Use of the ambenonium for modulation of the 3CLpro protease from SARS-CoV-2

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Eduardo José Azevedo Corrêa, Frederico Chaves Carvalho, Júlia Assunção de Castro Oliveira, Suzan Kelly Vilela Bertolucci, Marcus Tullius Scotti, Carlos Henrique Silveira, Fabiana Costa Guedes, Júlio Onésio Ferreira Melo, Raquel Cardoso de Melo-Minardi, Leonardo Henrique França de Lima

Elucidating the molecular mechanisms of essential oils' insecticidal action using a novel cheminformatics protocol

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2022 Rafael Eduardo Oliveira Rocha

, Diego César Batista Mariano

, Tiago Silva Almeida, Leon Sulfierry CorrêaCosta, Pedro Henrique Camargo Fischer, Lucianna Helene Santos, Ernesto Raul Caffarena, Carlos Henrique da Silveira

, Leonida M. Lamp, Monica Lisa Fernandez‐Quintero, Klaus Roman Liedl

, Raquel Cardoso de Melo‐Minardi, Leonardo Henrique França de Lima

Thermostabilizing mechanisms of canonical single amino acid substitutions at a GH1 β‐glucosidase probed by multiple MD and computational approaches

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Diego Mariano, Lucianna Helene Santos

, Luana Parras Meleiro, Leonardo Henrique França de Lima

, Luis Fernando Marins, Raquel Cardoso de Melo-Minardi

Using Computers to Improve Biofuel Production

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Isabela de Souza Gomes

, Charles Abreu Santana, Leandro Soriano Marcolino, Leonardo Henrique França de Lima

, Raquel Cardoso de Melo-Minardi, Roberto Sousa Dias, Sérgio Oliveira de Paula, Sabrina de Azevedo Silveira

Computational prediction of potential inhibitors for SARS-COV-2 main protease based on machine learning, docking, MM-PBSA calculations, and metadynamics

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Vitor Pimentel Dos Santos, André Rodrigues, Gabriel Dutra, Luana Bastos, Diego Mariano

, José Gutembergue Mendonça, Yan Jerônimo Gomes Lobo, Eduardo Mendes, Giovana Maia, Karina dos Santos Machado, Adriano Velasque Werhli

, Gerd Rocha, Leonardo Henrique França de Lima

, Raquel de Melo-Minardi

E-Volve: understanding the impact of mutations in SARS-CoV-2 variants spike protein on antibodies and ACE2 affinity through patterns of chemical interactions at protein interfaces

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Yuri G. Figueiredo

, Eduardo A. Corrêa

, Afonso H. de Oliveira Junior

, Ana C. D. C. Mazzinghy, Henrique D. O. P. Mendonça, Yan J. G. Lobo, Yesenia M. García, Marcelo A. D. S. Gouvêia, Ana C. C. F. F. de Paula, Rodinei Augusti

, Luisa D. C. B. Reina

, Carlos H. da Silveira

, Leonardo H. F. de Lima

, Júlio O. F. Melo

Profile of Myracrodruon urundeuva Volatile Compounds Ease of Extraction and Biodegradability and In Silico Evaluation of Their Interactions with COX-1 and iNOS

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Eduardo José Azevedo Corrêa, Stênio Nunes Alves, Mairon Cesar Coimbra, Leonardo Henrique França de Lima

The potential of the genus Baccharis spp. as an insecticide for mosquitoes and non-biting flies of veterinary importance

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2021 Vitor Pimentel, Diego Mariano, Letícia Xavier Silva Cantão, Luana Luiza Bastos, Pedro Fischer, Leonardo Henrique Franca de Lima

, Alexandre Victor Fassio, Raquel Cardoso de Melo-Minardi

VTR: A Web Tool for Identifying Analogous Contacts on Protein Structures and Their Complexes

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Leonardo Lima

BIOINFO - Revista Brasileira de Bioinformática e Biologia Computacional

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Rafael E. O. Rocha, Elton J. F. Chaves

, Pedro H. C. Fischer, Leon S. C. Costa, Igor Barden Grillo, Luiz E. G. da Cruz, Fabiana C. Guedes, Carlos H. da Silveira

, Marcus T. Scotti

, Alex D. Camargo, Karina S. Machado, Adriano V. Werhli, Rafaela S. Ferreira, Gerd B. Rocha

, Leonardo H. F. de Lima

A higher flexibility at the SARS-CoV-2 main protease active site compared to SARS-CoV and its potentialities for new inhibitor virtual screening targeting multi-conformers

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Leonardo Lima

Recombinant Yeast, Plasmide and Enzyme for the Phytase Production, Enzyme Getting Process and Uses.

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Pedro M. Martins

, Lucianna H. Santos

, Diego Mariano

, Felippe C. Queiroz, Luana L. Bastos, Isabela de S. Gomes, Pedro H. C. Fischer, Rafael E. O. Rocha, Sabrina A. Silveira, Leonardo H. F. de Lima

, Mariana T. Q. de Magalhães

, Maria G. A. Oliveira, Raquel C. de Melo-Minardi

Propedia: a database for protein–peptide identification based on a hybrid clustering algorithm

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Leonardo Lima

Water Stress-Induced Changes in the Physiology of Callistemon viminalis, Essential Oil Composition and Predicted Biological Activity

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2020 Diego Mariano

, Naiara Pantuza, Lucianna H. Santos

, Rafael E. O. Rocha, Leonardo H. F. de Lima

, Lucas Bleicher, Raquel Cardoso de Melo-Minardi

Glutantβase: a database for improving the rational design of glucose-tolerant β-glucosidases

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Leonardo Henrique Franca de Lima

, Monica Lisa Fernandez-Quintéro, Rafael Eduardo Oliveira Rocha, Diego César Batista Mariano

, Raquel Cardoso de Melo-Minardi, Klaus Roman Liedl

Conformational flexibility correlates with glucose tolerance for point mutations in β-glucosidases – a computational study

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Cleber José da Silva

, Leonardo Henrique França de Lima

, Priscila Marques de Paiva, Luana Malaquias Maia, Rafael Eduardo de Oliveira Rocha, Pedro Thiago Duarte de Souza, Deise Aparecida de Castro Araújo Carvalho

An inexpensive and environmentally friendly staining method for semi-permanent slides from plant material probed using anatomical and computational chemistry analyses

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2019 Leon Sulfierry Corrêa Costa, Diego César Batista Mariano

, Rafael Eduardo Oliveira Rocha, Johannes Kraml, Carlos Henrique da Silveira

, Klaus Roman Liedl

, Raquel Cardoso de Melo-Minardi, Leonardo Henrique Franca de Lima

Molecular Dynamics Gives New Insights into the Glucose Tolerance and Inhibition Mechanisms on β-Glucosidases

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Diego Mariano

, Lucianna Helene Santos

, Karina dos Santos Machado

, Adriano Velasque Werhli, Leonardo Henrique França de Lima

, Raquel Cardoso de Melo-Minardi

A Computational Method to Propose Mutations in Enzymes Based on Structural Signature Variation (SSV)

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All papers authored by Leonardo Lima