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All papers authored by Alexander Bishop

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2022 David S. Shulman, Sarah B. Whittle, Didier Surdez

ORCID

, Kelly M. Bailey

ORCID

, Enrique de Álava

ORCID

, Jason T. Yustein

ORCID

, Adam Shlien, Masanori Hayashi

ORCID

, Alexander J. R. Bishop

ORCID

, Brian D. Crompton, Steven G. DuBois, Neerav Shukla, Patrick J. Leavey, Stephen L. Lessnick

ORCID

, Heinrich Kovar

ORCID

and 11 other authors

An international working group consensus report for the prioritization of molecular biomarkers for Ewing sarcoma

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Henry E. Miller

ORCID

, Daniel Montemayor, Janet Li, Simon A. Levy, Roshan Pawar, Stella Hartono, Kumar Sharma, Bess Frost, Frédéric Chedin, Alexander J. R. Bishop

ORCID

Exploration and analysis of R-loop mapping data with RLBase

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Mirolyuba Ilieva

ORCID

ORCID

, Henry E. Miller

ORCID

, Jens Hedelund Madsen, Alexander J. R. Bishop

ORCID

, Sakari Kauppinen, Shizuka Uchida

ORCID

Systematic Analysis of Long Non-Coding RNA Genes in Nonalcoholic Fatty Liver Disease

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

H. E. Miller, D. Montemayor, S. Levy, K. Sharma, B. Frost, A. J. R. Bishop

ORCID

RLSuite: An integrative R-loop bioinformatics framework

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Brian S. Iskra, Logan Davis, Henry E. Miller

ORCID

, Yu-Chiao Chiu

ORCID

, Alexander J. R. Bishop

ORCID

, Yidong Chen, Gregory J. Aune

ORCID

Development and characterization of a mass cytometry panel for detecting the effect of acute doxorubicin exposure on murine cardiac nonmyocytes

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Henry E. Miller

ORCID

, Daniel Montemayor, Jebriel Abdul, Anna Vines, Simon A. Levy, Stella R. Hartono, Kumar Sharma, Bess Frost, Frédéric Chédin, Alexander J. R. Bishop

ORCID

Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions

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Henry E. Miller

ORCID

, Mirolyuba Ilieva, Alexander J. R. Bishop

ORCID

, Shizuka Uchida

ORCID

Current Status of Epitranscriptomic Marks Affecting lncRNA Structures and Functions

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Mirolyuba Ilieva

ORCID

, Henry E. Miller

ORCID

, Arav Agarwal, Gabriela K. Paulus, Jens Hedelund Madsen, Alexander J. R. Bishop

ORCID

, Sakari Kauppinen, Shizuka Uchida

ORCID

FibroDB: Expression Analysis of Protein-Coding and Long Non-Coding RNA Genes in Fibrosis

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2021 Adam D. Brown, Scott Greenman, Alison B. Claybon, Alexander J. R. Bishop

ORCID

BRCA2 Promotes Spontaneous Homologous Recombination In Vivo

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Henry E. Miller

ORCID

, Alexander J. R. Bishop

ORCID

Correlation AnalyzeR: functional predictions from gene co-expression correlations

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Erin H. Sybouts, Adam D. Brown, Maria G. Falcon-Cantrill, Martha H. Thomas, Thomas DeNapoli, Julie Voeller, Yidong Chen, Gail E. Tomlinson, Alexander J. R. Bishop

ORCID

Bloom syndrome in a Mexican American family with rhabdomyosarcoma: evidence of a Mexican founder mutation

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Rosângela Mayer Gonçalves

ORCID

, Raquel Nascimento das Neves

ORCID

, Marina Delgobo

ORCID

, Jonathan Paulo Agnes, Raquel Nascimento das Neves, Marcelo Falchetti

ORCID

, Tuany Casagrande, Ana Paula Vargas Garcia

ORCID

, Thaynan Cunha Vieira, Nauana Somensi, Maciel Alencar Bruxel, Daniel Augusto Gasparin Bueno Mendes, Alex Rafacho

ORCID

, André Báfica, Daniel Pens Gelain and 4 other authors

COX-2 promotes mammary adipose tissue inflammation, local estrogen biosynthesis, and carcinogenesis in high-sugar/fat diet treated mice

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2020 Karan J. Abraham

ORCID

, Negin Khosraviani

ORCID

, Janet N. Y. Chan, Aparna Gorthi, Anas Samman

ORCID

, Dorothy Y. Zhao, Miling Wang, Michael Bokros, Elva Vidya, Lauren A. Ostrowski

ORCID

, Roxanne Oshidari

ORCID

, Violena Pietrobon, Parasvi S. Patel, Arash Algouneh, Rajat Singhania and 10 other authors

Nucleolar RNA polymerase II drives ribosome biogenesis

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Henry E. Miller

ORCID

, Aparna Gorthi

ORCID

, Nicklas Bassani, Liesl A. Lawrence

ORCID

, Brian S. Iskra, Alexander J. R. Bishop

ORCID

Reconstruction of Ewing Sarcoma Developmental Context from Mass-Scale Transcriptomics Reveals Characteristics of EWSR1-FLI1 Permissibility

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2019 Sander Lambo, Susanne N. Gröbner, Tobias Rausch, Sebastian M. Waszak, Christin Schmidt, Aparna Gorthi, July Carolina Romero, Monika Mauermann, Sebastian Brabetz, Sonja Krausert, Ivo Buchhalter, Jan Koster, Danny A. Zwijnenburg

ORCID

, Martin Sill, Jens-Martin Hübner and 50 other authors

The molecular landscape of ETMR at diagnosis and relapse

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Eric S. Schafer

ORCID

, Rachel E. Rau, Stacey L. Berg, Xiaowei Liu, Charles G. Minard, Alexander J. R. Bishop

ORCID

, J. Carolina Romero, M. John Hicks, Marvin D. Nelson, Stephan Voss

ORCID

, Joel M. Reid, Elizabeth Fox, Brenda J. Weigel, Susan M. Blaney

Phase 1/2 trial of talazoparib in combination with temozolomide in children and adolescents with refractory/recurrent solid tumors including Ewing sarcoma: A Children's Oncology Group Phase 1 Consortium study (ADVL1411)

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2018 Alfeu Zanotto-Filho, Subapriya Rajamanickam, Eva Loranc, V. Pragathi Masamsetti, July Carolina Romero, Sonal Tonapi, Robert L. Reddick, John Kuhn, Rosangela Mayer Gonçalves, Aparna Gorthi

ORCID

, Raymond Benavides, Yidong Chen, Alexander J. R. Bishop

ORCID

Sorafenib improves alkylating therapy by blocking induced inflammation, invasion and angiogenesis in breast cancer cells

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Aparna Gorthi, July Carolina Romero, Eva Loranc, Lin Cao, Liesl A. Lawrence, Elicia Goodale, Amanda Balboni Iniguez, Xavier Bernard, V. Pragathi Masamsetti, Sydney Roston, Elizabeth R. Lawlor, Jeffrey A. Toretsky, Kimberly Stegmaier, Stephen L. Lessnick, Yidong Chen and 1 other authors

Author Correction: EWS–FLI1 increases transcription to cause R-loops and block BRCA1 repair in Ewing sarcoma

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Aparna Gorthi

ORCID

, Alexander J. R. Bishop

ORCID

Ewing sarcoma fusion oncogene: At the crossroads of transcription and DNA damage response

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2017 Preston Countryman, Hai Pan, Jack Strickland, Parminder Kaur, Xuechun Wang, Jiangguo Lin, Xiaoying Lei, Christian White, Changjiang You, Nicolas Wirth, Ingrid Tessmer, Jacob Piehler, Robert Riehn, Yizhi Jane Tao, Yanlin Fan and 3 other authors

Cohesin SA2 is a sequence-independent DNA-binding protein that recognizes DNA replication and repair intermediates

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