Timothy Johnson - Dissemin

All papers authored by Timothy Johnson

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2021 Fernando Sánchez

, Verónica Fuenzalida

, Romina Ramos

, Beatriz Escobar

, Víctor Neira

, Consuelo Borie

, Lisette Lapierre

, Paulina López

, Lucas Venegas

, Phillip Dettleff

, Timothy Johnson

, Danny Fuentes‐Castillo

, Nilton Lincopan

, Nicolás Galarce

Genomic features and antimicrobial resistance patterns of Shiga toxin‐producing Escherichia coli strains isolated from food in Chile

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This paper is made freely available by the publisher.

2020 Ehud Elnekave

, Samuel L. Hong

, Seunghyun Lim, Timothy J. Johnson

, Andres Perez, Julio Alvarez

Comparing serotyping with whole-genome sequencing for subtyping of non-typhoidal Salmonella enterica: a large-scale analysis of 37 serotypes with a public health impact in the USA

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2018 Jonathan B. Clayton

, Andres Gomez, Katherine Amato, Dan Knights, Dominic A. Travis

, Ran Blekhman, Rob Knight, Steven Leigh, Rebecca Stumpf, Tiffany Wolf, Kenneth E. Glander, Francis Cabana, Timothy J. Johnson

The gut microbiome of nonhuman primates: Lessons in ecology and evolution

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2013 Jessica L. Danzeisen, Alamanda J. Calvert, Sally L. Noll, Brian McComb, Julie S. Sherwood, Catherine M. Logue, Timothy J. Johnson

Succession of the turkey gastrointestinal bacterial microbiome related to weight gain

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Jessica L. Danzeisen, Yvonne Wannemuehler, Lisa K. Nolan, Timothy J. Johnson

Comparison of Multilocus Sequence Analysis and Virulence Genotyping of Escherichia coli from Live Birds, Retail Poultry Meat, and Human Extraintestinal Infection

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Juan E. Abrahante, Timothy J. Johnson

, Samuel S. Hunter, Samuel K. Maheswaran, Melissa J. Hauglund, Darrell O. Bayles, Fred M. Tatum, Robert E. Briggs

Draft Genome Sequences of Two Virulent Serotypes of Avian Pasteurella multocida

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Timothy J. Johnson

, Jessica L. Danzeisen, Darrell Trampel, Lisa K. Nolan, Torsten Seemann

, Ragnhild J. Bager, Anders M. Bojesen

Genome Analysis and Phylogenetic Relatedness of Gallibacterium anatis Strains from Poultry

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Timothy J. Johnson

, Juan E. Abrahante, Samuel S. Hunter, Melissa Hauglund, Fred M. Tatum, Samuel K. Maheswaran, Robert E. Briggs

Comparative genome analysis of an avirulent and two virulent strains of avian Pasteurella multocida reveals candidate genes involved in fitness and pathogenicity

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2012 Erin E. Sandford, Megan Orr, Xianyao Li, Huaijun Zhou, Timothy J. Johnson

, Subhashinie Kariyawasam, Peng Liu, Lisa K. Nolan, Susan J. Lamont

Strong Concordance Between Transcriptomic Patterns of Spleen and Peripheral Blood Leukocytes in Response to Avian Pathogenic Escherichia coli Infection

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J. S. Gnanandarajah, T. J. Johnson

, H. B. Kim, J. E. Abrahante, J. P. Lulich, M. P. Murtaugh

Comparative faecal microbiota of dogs with and without calcium oxalate stones

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Timothy J. Johnson

, Eliza M. Bielak, Daniela Fortini, Lars Hestbjerg Hansen

, Henrik Hasman, Chitrita Debroy, Lisa K. Nolan, Alessandra Carattoli

Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae

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Catherine M. Logue, Curt Doetkott, Paul Mangiamele, Yvonne M. Wannemuehler, Timothy J. Johnson

, Kelly A. Tivendale, Ganwu Li, Julie S. Sherwood, Lisa K. Nolan

Genotypic and Phenotypic Traits That Distinguish Neonatal Meningitis-Associated Escherichia coli from Fecal E. coli Isolates of Healthy Human Hosts

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Kevin S. Lang, Jessica L. Danzeisen, Wayne Xu, Timothy J. Johnson

Transcriptome Mapping of pAR060302, a bla _CMY-2 -Positive Broad-Host-Range IncA/C Plasmid

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Timothy J. Johnson

, Yvonne Wannemuehler, Subhashinie Kariyawasam, James R. Johnson, Catherine M. Logue, Lisa K. Nolan

Prevalence of Avian-Pathogenic Escherichia coli Strain O1 Genomic Islands among Extraintestinal and Commensal E. coli Isolates

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Aaron M. Lynne, Subhashinie Kariyawasam, Yvonne Wannemuehler, Timothy J. Johnson

, Sara J. Johnson, Avanti S. Sinha, Dorie K. Lynne, Harley W. Moon, Dianna M. Jordan, Catherine M. Logue, Steven L. Foley, Lisa K. Nolan

Recombinant Iss as a Potential Vaccine for Avian Colibacillosis

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Timothy J. Johnson

, Catherine M. Logue, James R. Johnson, Michael A. Kuskowski, Julie S. Sherwood, H. John Barnes, Chitrita DebRoy, Yvonne M. Wannemuehler, Mana Obata-Yasuoka, Lodewijk Spanjaard, Lisa K. Nolan

Associations Between Multidrug Resistance, Plasmid Content, and Virulence Potential Among Extraintestinal Pathogenic and CommensalEscherichia colifrom Humans and Poultry

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Erin E. Sandford, Megan Orr, Mandy Shelby, Xianyao Li, Huaijun Zhou, Timothy J. Johnson

, Subhashinie Kariyawasam, Peng Liu, Lisa K. Nolan, Susan J. Lamont

Leukocyte transcriptome from chickens infected with avian pathogenic Escherichia coli identifies pathways associated with resistance

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Timothy J. Johnson

, Kevin S. Lang

IncA/C plasmids

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2011 Jessica L. Danzeisen, Hyeun Bum Kim, Richard E. Isaacson, Zheng Jin Tu, Timothy J. Johnson

Modulations of the Chicken Cecal Microbiome and Metagenome in Response to Anticoccidial and Growth Promoter Treatment

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Sara M. Shepard, Jessica L. Danzeisen, Richard E. Isaacson, Torsten Seemann

, Mark Achtman, Timothy J. Johnson

Genome Sequences and Phylogenetic Analysis of K88- and F18-Positive Porcine Enterotoxigenic Escherichia coli

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All papers authored by Timothy Johnson