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All papers authored by Xue-Song Zhang

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2021 Xue-Song Zhang

ORCID

, Yue Sandra Yin, Jincheng Wang, Thomas Battaglia, Kimberly Krautkramer, Wei Vivian Li, Jackie Li

ORCID

, Mark Brown, Meifan Zhang, Michelle H. Badri, Abigail J. S. Armstrong, Christopher M. Strauch, Zeneng Wang, Ina Nemet, Nicole Altomare and 14 other authors

Maternal cecal microbiota transfer rescues early-life antibiotic-induced enhancement of type 1 diabetes in mice

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2020 Eun Kyung Lee

ORCID

, Wang-Jian Zhang

ORCID

, Xuesong Zhang

ORCID

, Paul R. Adler, Shao Lin, Beth J. Feingold

ORCID

, Haider A. Khwaja, Xiaobo X. Romeiko

Projecting life-cycle environmental impacts of corn production in the U.S. Midwest under future climate scenarios using a machine learning approach

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Alan Tourancheau, Edward A. Mead, Xue-Song Zhang

ORCID

, Gang Fang

Discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiome using nanopore sequencing

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2018 Xue-Song Zhang

ORCID

ORCID

, Kimberly A. Krautkramer, Michelle Badri, Thomas Battaglia, Timothy C. Borbet, Hyunwook Koh, Sandy Ng, Rachel A. Sibley, Yuanyuan Li, Wimal Pathmasiri, Shawn Jindal, Robin R. Shields-Cutler, Ben Hillmann, Gabriel A. Al-Ghalith and 14 other authors

Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity

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2017 John Beaulaurier

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, Shijia Zhu, Gintaras Deikus, Ilaria Mogno, Xue-Song Zhang

ORCID

, Austin Davis-Richardson, Ronald Canepa, Eric W. Triplett, Jeremiah J. Faith, Robert Sebra, Eric E. Schadt

ORCID

ORCID

Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation

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Seiichi Kato

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, Takako Osaki, Shigeru Kamiya, Xue-Song Zhang

ORCID

, Martin J. Blaser

ORCID

Helicobacter pylori sabA gene is associated with iron deficiency anemia in childhood and adolescence

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2016 Alexandra E. Livanos, Thomas U. Greiner, Pajau Vangay, Wimal Pathmasiri, Delisha Stewart, Susan McRitchie, Huilin Li, Jennifer Chung, Jiho Sohn, Sara Kim, Zhan Gao, Cecily Barber, Joanne Kim, Sandy Ng, Arlin B. Rogers and 7 other authors

Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice

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Sabine Kienesberger, Laura M. Cox, Alexandra Livanos, Xue-Song Zhang

ORCID

, Jennifer Chung, Guillermo I. Perez-Perez, Gregor Gorkiewicz

ORCID

, Ellen L. Zechner

ORCID

, Martin J. Blaser

Gastric Helicobacter pylori Infection Affects Local and Distant Microbial Populations and Host Responses

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2015 John Beaulaurier, Shijia Zhu, Robert Sebra, Chaggai Rosenbluh, Gintaras Deikus, Nan Shen, Xue-Song Zhang

ORCID

, Diana Munera, Matthew K. Waldor, Martin J. Blaser, Andrew Chess, Eric E. Schadt, Gang Fang

Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes

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Xue-Song Zhang

ORCID

, Nicole Tegtmeyer, Leah Traube, Shawn Jindal, Guillermo Perez-Perez, Heinrich Sticht, Steffen Backert, Martin J. Blaser

A Specific A/T Polymorphism in Western Tyrosine Phosphorylation B-Motifs Regulates Helicobacter pylori CagA Epithelial Cell Interactions

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2013 Ana Maldonado-Contreras, Shrinivasrao P. Mane, Xue-Song Zhang

ORCID

, Luis Pericchi, Teresa Alarcón, Monica Contreras, Bodo Linz, Martin J. Blaser, María Gloria Domínguez-Bello

Phylogeographic evidence of cognate recognition site patterns and transformation efficiency differences in H. pylori: theory of strain dominance

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2012 Xue-Song Zhang

ORCID

, Martin J. Blaser

DprB Facilitates Inter- and Intragenomic Recombination in Helicobacter pylori

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Xue-Song Zhang

ORCID

, Martin J. Blaser

Natural Transformation of an Engineered Helicobacter pylori Strain Deficient in Type II Restriction Endonucleases

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2010 Younghoon Kim, Xiaoxue Wang, Xue-Song Zhang

ORCID

, Simina Grigoriu, Rebecca Page, Wolfgang Peti, Thomas K. Wood

Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD

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2009 Edward A. Lin, Xue-Song Zhang

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, Steven M. Levine, Steven R. Gill, Daniel Falush, Martin J. Blaser

Natural Transformation of Helicobacter pylori Involves the Integration of Short DNA Fragments Interrupted by Gaps of Variable Size

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2008 Younghoon Kim, Xiaoxue Wang, Qun Ma, Xue-Song Zhang

ORCID

, Thomas K. Wood

ORCID

Toxin-Antitoxin Systems in Escherichia coli Influence Biofilm Formation through YjgK (TabA) and Fimbriae

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Rodolfo García-Contreras, Xue-Song Zhang

ORCID

, Younghoon Kim, Thomas K. Wood

ORCID

Protein Translation and Cell Death: The Role of Rare tRNAs in Biofilm Formation and in Activating Dormant Phage Killer Genes

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Jintae Lee, Xue-Song Zhang

ORCID

, Manjunath Hegde, William E. Bentley, Arul Jayaraman, Thomas K. Wood

ORCID

Indole cell signaling occurs primarily at low temperatures in Escherichia coli

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Xue-Song Zhang

ORCID

, Rodolfo García-Contreras, Thomas K. Wood

ORCID

Escherichia coli transcription factor YncC (McbR) regulates colanic acid and biofilm formation by repressing expression of periplasmic protein YbiM (McbA)

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2007 Jintae Lee, Rebecca Page, Rodolfo García-Contreras, Jeanne-Marie Palermino, Xue-Song Zhang

ORCID

, Ojus Doshi, Thomas K. Wood

ORCID

, Wolfgang Peti

Structure and Function of the Escherichia coli Protein YmgB: A Protein Critical for Biofilm Formation and Acid-resistance

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