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All papers authored by Hebing Chen

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2023 Ting Peng, Yingping Hou, Haowei Meng

ORCID

, Yong Cao

ORCID

, Xiaotian Wang, Lumeng Jia, Qing Chen

ORCID

, Yang Zheng, Yujie Sun

ORCID

, Hebing Chen

ORCID

ORCID

, Cheng Li

ORCID

Mapping nucleolus-associated chromatin interactions using nucleolus Hi-C reveals pattern of heterochromatin interactions

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2022 Xiaohan Tang, Junting Wang, Huan Tao, Lin Yuan, Guifang Du, Yang Ding, Kang Xu, Xuemei Bai, Yaru Li, Yu Sun, Xin Huang, Xiushuang Zheng, Qianqian Li, Bowen Gong, Yang Zheng and 7 other authors

Regulatory patterns analysis of transcription factor binding site clustered regions and identification of key genes in endometrial cancer

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2021 Huan Tao, Hao Li, Kang Xu, Hao Hong, Shuai Jiang, Guifang Du, Junting Wang, Yu Sun, Xin Huang, Yang Ding, Fei Li, Xiaofei Zheng, Hebing Chen

ORCID

ORCID

Computational methods for the prediction of chromatin interaction and organization using sequence and epigenomic profiles

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Dan Guo

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, Qiu Xie, Shuai Jiang

ORCID

, Ting Xie, Yaru Li, Xin Huang, Fangyuan Li, Tingting Wang, Jian Sun, Anqi Wang, Zixin Zhang, Hao Li, Xiaochen Bo, Hebing Chen

ORCID

, Zhiyong Liang

Synergistic alterations in the multilevel chromatin structure anchor dysregulated genes in small cell lung cancer

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Guifang Du, Hao Li, Yang Ding, Shuai Jiang, Hao Hong, Jingbo Gan, Longteng Wang, Yuanping Yang, Yinyin Li, Xin Huang, Yu Sun, Huan Tao, Yaru Li, Xiang Xu, Yang Zheng and 8 other authors

The hierarchical folding dynamics of topologically associating domains are closely related to transcriptional abnormalities in cancers

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2020 Shuai Jiang, Hao Li, Hao Hong, Guifang Du, Xin Huang, Yu Sun, Junting Wang, Huan Tao, Kang Xu, Cheng Li, Yang Chen, Hebing Chen

ORCID

ORCID

Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains

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Hao Hong

ORCID

ORCID

, Hao Li, Yu Sun

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ORCID

, Huan Tao

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, Guifang Du, Chenghui Zhao, Ruijiang Li, Wanying Li, Xiaoyao Yin

ORCID

, Yangchen Huang, Cheng Li, Hebing Chen

ORCID

ORCID

DeepHiC: A generative adversarial network for enhancing Hi-C data resolution

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2019 Hebing Chen

ORCID

, Zhuo Zhang, Shuai Jiang, Ruijiang Li, Wanying Li, Chenghui Zhao, Hao Hong, Xin Huang, Hao Li, Xiaochen Bo

ORCID

New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform

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Qiaowei Liu, Hao Li, Lukuan You, Tao Li, Lingling Li, Pingkun Zhou, Xiaochen Bo, Hebing Chen

ORCID

, Xiaohua Chen, Yi Hu

Genome-wide identification and analysis of A-to-I RNA editing events in the malignantly transformed cell lines from bronchial epithelial cell line induced by α-particles radiation

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Ruijiang Li, Shuai Jiang, Wanying Li, Hao Hong, Chenghui Zhao, Xin Huang, Zhuo Zhang, Hao Li

ORCID

, Hebing Chen

ORCID

ORCID

Exploration of prognosis-related microRNA and transcription factor co-regulatory networks across cancer types

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Xin Huang, Xudong Gao, Wanying Li, Shuai Jiang, Ruijiang Li, Hao Hong, Chenghui Zhao, Pingkun Zhou, Hebing Chen

ORCID

ORCID

, Hao Li

ORCID

Stable H3K4me3 is associated with transcription initiation during early embryo development

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2018 Ruijiang Li, Hebing Chen

ORCID

, Shuai Jiang, Wanying Li, Hao Li, Zhuo Zhang, Hao Hong, Xin Huang, Chenghui Zhao, Yiming Lu, Xiaochen Bo

ORCID

CMTCN: a web tool for investigating cancer-specific microRNA and transcription factor co-regulatory networks

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Zhuo Zhang, Hao Li, Shuai Jiang, Ruijiang Li, Wanying Li, Hebing Chen

ORCID

ORCID

A survey and evaluation of Web-based tools/databases for variant analysis of TCGA data

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2017 Hebing Chen

ORCID

, Shuai Jiang, Zhuo Zhang, Hao Li, Yiming Lu, Xiaochen Bo

ORCID

Exploring spatially adjacent TFBS-clustered regions with Hi-C data

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2016 Yiming Lu, Cheng Quan, Hebing Chen

ORCID

ORCID

, Chenggang Zhang

3DSNP: a database for linking human noncoding SNPs to their three-dimensional interacting genes

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Chao Ren, Hebing Chen

ORCID

, Bite Yang, Feng Liu, Hao Li, Zhangyi Ouyang, Xiaochen Bo

ORCID

, Wenjie Shu

iFORM: incorporating Find Occurrence of Regulatory Motifs

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2015 Hebing Chen

ORCID

, Hao Li, Feng Liu, Xiaofei Zheng, Shengqi Wang, Xiaochen Bo

ORCID

, Wenjie Shu

An integrative analysis of TFBS-clustered regions reveals new transcriptional regulation models on the accessible chromatin landscape

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2012 Hebing Chen

ORCID

, Yao Tian, Wenjie Shu, Xiaochen Bo

ORCID

, Shengqi Wang

Comprehensive Identification and Annotation of Cell Type-Specific and Ubiquitous CTCF-Binding Sites in the Human Genome

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2011 Wenjie Shu, Hebing Chen

ORCID

ORCID

, Shengqi Wang

Genome-wide analysis of the relationships between DNaseI HS, histone modifications and gene expression reveals distinct modes of chromatin domains

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