Michael Wall - Dissemin

Papers authored by Michael Wall

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2015 S. M. Mniszewski, M. J. Cawkwell, M. E. Wall

, J. Mohd-Yusof, N. Bock, T. C. Germann, A. M. N. Niklasson

Efficient Parallel Linear Scaling Construction of the Density Matrix for Born–Oppenheimer Molecular Dynamics

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Andrew H. Van Benschoten, Pavel V. Afonine, Thomas C. Terwilliger

, Michael E. Wall

, Colin J. Jackson, Nicholas K. Sauter, Paul D. Adams, Alexandre Urzhumtsev, James S. Fraser

Predicting X-ray diffuse scattering from translation–libration–screw structural ensembles

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2014 Michael E. Wall

, Andrew H. Van Benschoten, Nicholas K. Sauter, Paul D. Adams, James S. Fraser

, Thomas C. Terwilliger

Conformational dynamics of a crystalline protein from microsecond-scale molecular dynamics simulations and diffuse X-ray scattering

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Ilya Nemenman, James R. Faeder, S. Gnanakaran, William S. Hlavacek, Brian Munsky, Michael E. Wall

, Yi Jiang

The Seventh q-bio Conference: Meeting report and preface

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Michael E. Wall

, Paul D. Adams, James S. Fraser

, Nicholas K. Sauter

Diffuse X-Ray Scattering to Model Protein Motions

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2013 Ilya Nemenman, S. Gnanakaran, Brian Munsky, Michael E. Wall

, Yi Jiang, William S. Hlavacek, James R. Faeder

Special section dedicated to The Sixth q-bio Conference: meeting report and preface

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2012 Andrew Mackinlay, Karin Verspoor

, Judith D. Cohn, Michael E. Wall

Detection of Protein Catalytic Sites in the Biomedical Literature

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Ke Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall

, Karin Verspoor

Literature mining of protein-residue associations with graph rules learned through distant supervision

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Ilya Nemenman, S. Gnanakaran, William S. Hlavacek, Yi Jiang, Brian Munsky, Michael E. Wall

, James R. Faeder

The Fifth Annual q-bio Conference on Cellular Information Processing

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Karin M. Verspoor

, Judith D. Cohn, Komandur E. Ravikumar, Michael E. Wall

Text Mining Improves Prediction of Protein Functional Sites

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2011 K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall

, Karin Verspoor

Pattern Learning through Distant Supervision for Extraction of Protein-Residue Associations in the Biomedical Literature

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Michael E. Wall

, Sindhu Raghavan, Judith D. Cohn, John Dunbar

Genome Majority Vote Improves Gene Predictions

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Dengming Ming, Michael E. Wall

Predicting Binding Sites by Analyzing Allosteric Effects

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Ilya Nemenman, James R. Faeder, William S. Hlavacek, Yi Jiang, Michael E. Wall

, Anton Zilman

Selected papers from the Fourth Annual q-bio Conference on Cellular Information Processing

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Michael E. Wall

Structure–function relations are subtle in genetic regulatory networks

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John Dunbar, Judith D. Cohn, Michael E. Wall

Consistency of gene starts among Burkholderia genomes

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2010 I. Nemenman, A. Zilman, M. E. Wall

, W. S. Hlavacek, Y. Jiang

Editorial: Selected papers from the Third q-bio Conference on Cellular Information Processing

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2009 Michael E. Wall

, David A. Markowitz, Judah L. Rosner, Robert G. Martin

Model of Transcriptional Activation by MarA in Escherichia coli

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Ilya Nemenman, William S. Hlavacek, Michael E. Wall

, Yi Jiang

Editorial: Selected papers from the Second q-bio Conference on Cellular Information Processing

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Michael E. Wall

Methods and Software for Diffuse X-Ray Scattering from Protein Crystals

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Papers authored by Michael Wall