All papers authored by Fidel Ramírez
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2022
Merit Wildung,
Christian Herr 
,
Dietmar Riedel ,
Cornelia Wiedwald,
Alena Moiseenko,
Fidel Ramírez ,
Hataitip Tasena,
Maren Heimerl,
Mihai Alevra ,
Naira Movsisyan,
Maike Schuldt,
Larisa Volceanov-Hahn,
Sharen Provoost,
Tabea Nöthe-Menchen ,
Diana Urrego
and 13 other authors
,
Dietmar Riedel ,
Cornelia Wiedwald,
Alena Moiseenko,
Fidel Ramírez ,
Hataitip Tasena,
Maren Heimerl,
Mihai Alevra ,
Naira Movsisyan,
Maike Schuldt,
Larisa Volceanov-Hahn,
Sharen Provoost,
Tabea Nöthe-Menchen ,
Diana Urrego
and 13 other authors
miR449 Protects Airway Regeneration by Controlling AURKA/HDAC6-Mediated Ciliary Disassembly
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2020
Mehmet Tekman ,
Bérénice Batut ,
Alexander Ostrovsky ,
Christophe Antoniewski ,
Dave Clements ,
Fidel Ramirez ,
Graham J. Etherington ,
Hans-Rudolf Hotz ,
Jelle Scholtalbers ,
Jonathan R. Manning ,
Lea Bellenger ,
Maria A. Doyle ,
Mohammad Heydarian ,
Ni Huang ,
Nicola Soranzo
and 8 other authors
,
Bérénice Batut ,
Alexander Ostrovsky ,
Christophe Antoniewski ,
Dave Clements ,
Fidel Ramirez ,
Graham J. Etherington ,
Hans-Rudolf Hotz ,
Jelle Scholtalbers ,
Jonathan R. Manning ,
Lea Bellenger ,
Maria A. Doyle ,
Mohammad Heydarian ,
Ni Huang ,
Nicola Soranzo
and 8 other authors
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework
Download from academic.oup.com
Mehmet Tekman,
Bérénice Batut,
Alexander Ostrovsky,
Christophe Antoniewski,
Dave Clements,
Fidel Ramirez ,
Graham J. Etherington,
Hans-Rudolf Hotz,
Jelle Scholtalbers ,
Jonathan R. Manning,
Lea Bellenger,
Maria A. Doyle,
Mohammad Heydarian,
Ni Huang,
Nicola Soranzo
and 8 other authors
,
Graham J. Etherington,
Hans-Rudolf Hotz,
Jelle Scholtalbers ,
Jonathan R. Manning,
Lea Bellenger,
Maria A. Doyle,
Mohammad Heydarian,
Ni Huang,
Nicola Soranzo
and 8 other authors
A single-cell RNA-seq Training and Analysis Suite using the Galaxy Framework
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2018
Laura Arrigoni ,
Hoor Al-Hasani,
Fidel Ramírez ,
Ilaria Panzeri ,
Devon Patrick Ryan,
Diana Santacruz,
Nadia Kress,
John Andrew Pospisilik,
Ulrike Bönisch,
Thomas Manke
,
Hoor Al-Hasani,
Fidel Ramírez ,
Ilaria Panzeri ,
Devon Patrick Ryan,
Diana Santacruz,
Nadia Kress,
John Andrew Pospisilik,
Ulrike Bönisch,
Thomas Manke
RELACS nuclei barcoding enables high-throughput ChIP-seq
Download from doi.org
2017
Bérénice Batut ,
Saskia Hiltemann ,
Andrea Bagnacani ,
Dannon Baker ,
Vivek Bhardwaj,
Clemens Blank ,
Anthony Bretaudeau ,
Loraine Brillet-Guéguen,
Loraine Guéguen ,
Martin Čech ,
John Chilton ,
Anika Erxleben ,
Dave Clements ,
Mallory Ann Freeberg ,
Olivia Doppelt-Azeroual
and 24 other authors
,
Saskia Hiltemann ,
Andrea Bagnacani ,
Dannon Baker ,
Vivek Bhardwaj,
Clemens Blank ,
Anthony Bretaudeau ,
Loraine Brillet-Guéguen,
Loraine Guéguen ,
Martin Čech ,
John Chilton ,
Anika Erxleben ,
Dave Clements ,
Mallory Ann Freeberg ,
Olivia Doppelt-Azeroual
and 24 other authors
Community-driven data analysis training for biology
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2016
Fidel Ramírez ,
Devon P. Ryan,
Björn Grüning ,
Vivek Bhardwaj,
Fabian Kilpert,
Andreas S. Richter ,
Steffen Heyne,
Friederike Dündar ,
Thomas Manke
,
Devon P. Ryan,
Björn Grüning ,
Vivek Bhardwaj,
Fabian Kilpert,
Andreas S. Richter ,
Steffen Heyne,
Friederike Dündar ,
Thomas Manke
deepTools2: a next generation web server for deep-sequencing data analysis
Download from doi.org
2015
Fidel Ramírez ,
Thomas Lingg,
Sarah Toscano,
Kin Chung Lam,
Plamen Georgiev,
Ho-Ryun Chung,
Bryan R. Lajoie,
Elzo de Wit,
Ye Zhan,
Wouter de Laat ,
Job Dekker,
Thomas Manke,
Asifa Akhtar
Download from europepmc.org
,
Thomas Lingg,
Sarah Toscano,
Kin Chung Lam,
Plamen Georgiev,
Ho-Ryun Chung,
Bryan R. Lajoie,
Elzo de Wit,
Ye Zhan,
Wouter de Laat ,
Job Dekker,
Thomas Manke,
Asifa Akhtar
Download from europepmc.org
2014
Fidel Ramírez ,
Friederike Dündar ,
Sarah Diehl,
Björn A. Grüning,
Thomas Manke
,
Friederike Dündar ,
Sarah Diehl,
Björn A. Grüning,
Thomas Manke
deepTools: a flexible platform for exploring deep-sequencing data
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