All papers authored by Philippe Hupé
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2021
Fabrice Allain,
Julien Roméjon,
Philippe La Rosa,
Frédéric Jarlier,
Nicolas Servant,
Philippe Hupé 
Geniac: Automatic Configuration GENerator and Installer for nextflow pipelines
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Frédéric Jarlier ,
Nicolas Joly,
Nicolas Fedy,
Thomas Magalhaes,
Leonor Sirotti,
Paul Paganiban,
Firmin Martin ,
Michael McManus,
Philippe Hupé
,
Nicolas Joly,
Nicolas Fedy,
Thomas Magalhaes,
Leonor Sirotti,
Paul Paganiban,
Firmin Martin ,
Michael McManus,
Philippe Hupé
QUARTIC: QUick pArallel algoRithms for high-Throughput sequencIng data proCessing
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2019
Nanna Fyhrquist ,
Gareth Muirhead,
Stefanie Prast-Nielsen ,
Marine Jeanmougin,
Peter Olah,
Tiina Skoog ,
Gerome Jules-Clement,
Micha Feld,
Mauricio Barrientos-Somarribas,
Hanna Sinkko,
Ellen H. van den Bogaard,
Patrick L. J. M. Zeeuwen,
Gijs Rikken,
Joost Schalkwijk,
Hanna Niehues
and 32 other authors
,
Gareth Muirhead,
Stefanie Prast-Nielsen ,
Marine Jeanmougin,
Peter Olah,
Tiina Skoog ,
Gerome Jules-Clement,
Micha Feld,
Mauricio Barrientos-Somarribas,
Hanna Sinkko,
Ellen H. van den Bogaard,
Patrick L. J. M. Zeeuwen,
Gijs Rikken,
Joost Schalkwijk,
Hanna Niehues
and 32 other authors
Microbe-host interplay in atopic dermatitis and psoriasis
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Suzy Scholl ,
Marina Popovic,
Anne de la Rochefordiere,
Aljosa Mandic,
Katarina Koprivsek,
Nina Samet,
Madalin Margan,
Sanne Samuels,
Henry Zijlmans,
Gemma Kenter,
Goran Malenkovic,
Christine Kerr,
Charlotte Ngo,
Fabrice Lecuru,
Eleonor Rivin del Campo
and 41 other authors
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,
Marina Popovic,
Anne de la Rochefordiere,
Aljosa Mandic,
Katarina Koprivsek,
Nina Samet,
Madalin Margan,
Sanne Samuels,
Henry Zijlmans,
Gemma Kenter,
Goran Malenkovic,
Christine Kerr,
Charlotte Ngo,
Fabrice Lecuru,
Eleonor Rivin del Campo
and 41 other authors
Download from doi.org
2018
Patricia Marino,
Rajae Touzani,
Lionel Perrier,
Etienne Rouleau,
Dede Sika Kossi,
Zou Zhaomin,
Claude Preudhomme,
Nathanaël Charrier,
Nicolas Goardon,
Isabelle Durand-Zaleski,
Isabelle Borget,
Sandrine Baffert,
Philippe Hupe
Download from www.nature.com
Download from www.nature.com
2016
Daniela Chmiest,
Nanaocha Sharma,
Natacha Zanin,
Christine Viaris de Lesegno,
Massiullah Shafaq-Zadah,
Vonick Sibut,
Florent Dingli,
Philippe Hupé ,
Stephan Wilmes,
Jacob Piehler,
Damarys Loew,
Ludger Johannes,
Gideon Schreiber,
Christophe Lamaze
Download from www.nature.com
,
Stephan Wilmes,
Jacob Piehler,
Damarys Loew,
Ludger Johannes,
Gideon Schreiber,
Christophe Lamaze
Download from www.nature.com
S. (Sanne) Samuels,
Heiko von der Leyen,
B. (Balazs) Balint,
Leanne de Koning,
H. (Heiko) Von Der Leyen,
P. (Philippe) Hupé ,
L. (Léanne) De Koning,
C. (Choumouss) Kamoun,
W. (Windy) Luscap-Rondof,
U. (Ulrike) Wittkop,
K. (Ksenia) Bagrintseva,
M. (Marina) Popovic,
A. (Attila) Kereszt,
J. J. (Els) Berns,
Els Berns
and 4 other authors
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,
L. (Léanne) De Koning,
C. (Choumouss) Kamoun,
W. (Windy) Luscap-Rondof,
U. (Ulrike) Wittkop,
K. (Ksenia) Bagrintseva,
M. (Marina) Popovic,
A. (Attila) Kereszt,
J. J. (Els) Berns,
Els Berns
and 4 other authors
Download from www.nature.com
2015
Charlotte Ngo,
Sanne Samuels,
Andrea Slocker,
Gemma Kenter,
Marina Popovic,
Nina Samet,
Patricia Tresca,
Heiko von der Leyen,
Roman Rouzier,
Maud Kamal,
Suzy Scholl,
Ksenia Bagrintseva,
Philippe Hupé ,
Eric Deutsch,
Lisa Belin
and 1 other authors
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,
Eric Deutsch,
Lisa Belin
and 1 other authors
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Maxime Touzot ,
Alix Dahirel,
Antonio Cappuccio,
Elodie Segura,
Philippe Hupé ,
Vassili Soumelis
Download from www.researchgate.net
,
Alix Dahirel,
Antonio Cappuccio,
Elodie Segura,
Philippe Hupé ,
Vassili Soumelis
Download from www.researchgate.net
Antonio Cappuccio,
Mirjam Schenk,
Raphaël Zollinger,
Nicolas Servant,
Aleksandra Walczak,
Emmanuel Barillot,
Philippe Hupé ,
Robert L. Modlin,
Vassili Soumelis
,
Robert L. Modlin,
Vassili Soumelis
Combinatorial code governing cellular responses to complex stimuli
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Valentina Boeva ,
Christophe Le Tourneau,
Tatiana Popova,
Maxime Lienard,
Sebastien Toffoli,
Maud Kamal,
Christophe Le Tourneau,
David Gentien,
Thomas Rio Frio,
Nicolas Servant,
Pierre Gestraud ,
Thomas Rio Frio,
Philippe Hupé ,
Emmanuel Barillot,
Jean-François Laes
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,
Christophe Le Tourneau,
Tatiana Popova,
Maxime Lienard,
Sebastien Toffoli,
Maud Kamal,
Christophe Le Tourneau,
David Gentien,
Thomas Rio Frio,
Nicolas Servant,
Pierre Gestraud ,
Thomas Rio Frio,
Philippe Hupé ,
Emmanuel Barillot,
Jean-François Laes
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Julien Roméjon,
Julien Roméjon,
Nicolas Servant,
Pierre Gestraud ,
Philippe La Rosa,
Séverine Lair,
Philippe La Rosa,
Georges Lucotte,
Virginie Bernard,
Bruno Zeitouni,
Fanny Coffin,
Gérôme Jules-Clã©ment,
Florent Yvon,
Alban Lermine,
Patrick Poullet
and 13 other authors
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,
Philippe La Rosa,
Séverine Lair,
Philippe La Rosa,
Georges Lucotte,
Virginie Bernard,
Bruno Zeitouni,
Fanny Coffin,
Gérôme Jules-Clã©ment,
Florent Yvon,
Alban Lermine,
Patrick Poullet
and 13 other authors
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Alizée Boin,
Anne Couvelard,
Christophe Couderc,
Isabel Brito,
Dan Filipescu,
Michel Kalamarides,
Pierre Bedossa,
Leanne De Koning,
Carine Danelsky,
Thierry Dubois,
Philippe Hupé ,
Daniel Louvard,
Dominique Lallemand
Download from www.ncbi.nlm.nih.gov
,
Daniel Louvard,
Dominique Lallemand
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2013
Isabel Brito,
Philippe Hupé ,
Emmanuel Barillot,
Pierre Neuvial
,
Emmanuel Barillot,
Pierre Neuvial
Stability-Based Comparison of Class Discovery Methods for DNA Copy Number Profiles
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