Eugénio C. Ferreira

Papers authored by Eugénio C. Ferreira

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2011 An??lia Louren??o, Anália Lourenço, Jos?? P Pinto, Sónia Carneiro, Miguel Rocha, Eugénio C. Ferreira

, Isabel Rocha

Interpreting the regulatory interplay in E. coli metabolic pathways

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Rafael Carreira, Sónia Carneiro, Rui Pereira, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira

, Anália Lourenço

Semantic annotation of biological concepts interplaying microbial cellular responses

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Sónia Carneiro, An??lia Louren??o, Anália Lourenço, Eugénio C. Ferreira

, Isabel Rocha

Stringent response of escherichia coli : revisiting the bibliome using literature mining

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C. Daniel Machado, Rafael S. Costa, Miguel Rocha, Eugénio C. Ferreira

, Bruce Tidor, Isabel Rocha

Modeling formalisms in Systems Biology

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Sónia Carneiro, Eugénio C. Ferreira

, Isabel Rocha

A Systematic Modeling Approach to Elucidate the Triggering of the Stringent Response in Recombinant E. coli Systems

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An??lia Louren??o, Anália Lourenço, Sónia Carneiro, Jos?? P P. Pinto, Miguel Rocha, Eugénio C. Ferreira

, Isabel Rocha

A study of the short and long-term regulation of E. coli metabolic pathways

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Sónia Carneiro, Silas G. Villas Bôas, Eugénio C. Ferreira

, Isabel Rocha

Metabolic footprint analysis of recombinant Escherichia coli strains during fed-batch fermentations

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2010 An??lia Louren??o, A. Lourenco, S. Carneiro, Miguel Rocha, E. C. Ferreira

, I. Rocha

Challenges in integrating Escherichia coli molecular biology data

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Sílvio B. Santos, E. Fernandes, Carla M. Carvalho, Sanna Sillankorva, V. N. Krylov, Pleteneva Ea, E. A. Pleteneva, O. V. Shaburova, Ana Nicolau, E. C. Ferreira

, Joana Azeredo

Selection and characterization of a multivalent Salmonella phage and its production in a nonpathogenic Escherichia coli strain

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Lucília Domingues

, Isabel Rocha, Fernando Dourado

, Madalena M. Alves

, Eugénio C. Ferreira

Virtual laboratories in (bio)chemical engineering education

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An??lia Louren??o, Miguel Rocha, Anália Lourenço, Rafael Carreira, Daniel Glez-Pe??a, Jos?? R M??ndez, José R. Méndez, Sónia Carneiro, Lu??s M. Rocha, Fernando D??az, Fernando Díaz, Eugénio C. Ferreira

, Isabel Rocha, Florentino Fdez-Riverola

BioDR : semantic indexing networks for biomedical document retrieval

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Rafael S. Costa, Daniel Machado, Isabel Rocha, Eugénio C. Ferreira

Hybrid dynamic modeling of Escherichia coli central metabolic network combining Michaelis-Menten and approximate kinetic equations

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D. P. Mesquita, Oscar Dias, A. L. Amaral, E. C. Ferreira

A comparison between bright field and phase-contrast image analysis techniques in activated sludge morphological characterization

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Eugénio C. Ferreira

, William M. Miller

10th International Chemical and Biological Engineering Conference – CHEMPOR 2008 – Integrating Life Sciences & Engineering Special Section

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Oscar Dias, Miguel Rocha, Eugenio C. Ferreira

, Isabel Rocha

Merlin : metabolic models reconstruction using genome-scale information

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Zita I. T. A. Soons, Eugénio C. Ferreira

, Isabel Rocha

Selection of elementary modes for bioprocess control

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Daniel Machado, Rafael S. Costa, Miguel Rocha, Isabel Rocha, Bruce Tidor, Eugénio C. Ferreira

Model Transformation of Metabolic Networks using a Petri Net Based Framework.

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D. P. Mesquita, Oscar Dias, R. A. V. Elias, A. L. Amaral, E. C. Ferreira

Dilution and magnification effects on image analysis applications in activated sludge characterization

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Sónia Carneiro, Silas G. Villas-Bôas, Isabel Rocha, Eugénio C. Ferreira

Applying a metabolic footprinting approach to characterize the impact of the recombinant protein production in Escherichia coli

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Rafael S. Costa, C. Daniel Machado, Eugénio C. Ferreira

, Isabel Rocha

Evaluating the integration of proteomic data for the prediction of intracellular fluxes after knockout experiments

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Papers authored by Eugénio C. Ferreira