All papers authored by Jeffrey Rogers
Refreshing results…
2023
R. Alan Harris 
,
Muthuswamy Raveendran ,
Wes Warren,
Hillier W. LaDeana,
Chad Tomlinson ,
Tina Graves-Lindsay,
Richard E. Green ,
Jenna K. Schmidt ,
Julia C. Colwell,
Allison T. Makulec,
Shelley A. Cole ,
Ian H. Cheeseman,
Corinna N. Ross ,
Saverio Capuano,
Evan E. Eichler
and 2 other authors
,
Muthuswamy Raveendran ,
Wes Warren,
Hillier W. LaDeana,
Chad Tomlinson ,
Tina Graves-Lindsay,
Richard E. Green ,
Jenna K. Schmidt ,
Julia C. Colwell,
Allison T. Makulec,
Shelley A. Cole ,
Ian H. Cheeseman,
Corinna N. Ross ,
Saverio Capuano,
Evan E. Eichler
and 2 other authors
Whole Genome Analysis of SNV and Indel Polymorphism in Common Marmosets (Callithrix jacchus)
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Lukas F. K. Kuderna ,
Jacob C. Ulirsch,
Sabrina Rashid,
Mohamed Ameen,
Laksshman Sundaram,
Glenn Hickey ,
Anthony J. Cox,
Hong Gao ,
Arvind Kumar,
Francois Aguet ,
Matthew J. Christmas,
Hiram Clawson,
Maximilian Haeussler,
Mareike C. Janiak ,
Martin Kuhlwilm
and 77 other authors
,
Jacob C. Ulirsch,
Sabrina Rashid,
Mohamed Ameen,
Laksshman Sundaram,
Glenn Hickey ,
Anthony J. Cox,
Hong Gao ,
Arvind Kumar,
Francois Aguet ,
Matthew J. Christmas,
Hiram Clawson,
Maximilian Haeussler,
Mareike C. Janiak ,
Martin Kuhlwilm
and 77 other authors
Identification of constrained sequence elements across 239 primate genomes
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Petko P. Fiziev ,
Jeremy McRae ,
Jacob C. Ulirsch ,
Jacqueline S. Dron ,
Tobias Hamp,
Yanshen Yang,
Pierrick Wainschtein ,
Zijian Ni ,
Joshua G. Schraiber,
Hong Gao ,
Dylan Cable,
Yair Field ,
Francois Aguet ,
Marc Fasnacht,
Ahmed Metwally
and 6 other authors
,
Jeremy McRae ,
Jacob C. Ulirsch ,
Jacqueline S. Dron ,
Tobias Hamp,
Yanshen Yang,
Pierrick Wainschtein ,
Zijian Ni ,
Joshua G. Schraiber,
Hong Gao ,
Dylan Cable,
Yair Field ,
Francois Aguet ,
Marc Fasnacht,
Ahmed Metwally
and 6 other authors
Rare penetrant mutations confer severe risk of common diseases
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Lukas F. K. Kuderna ,
Hong Gao ,
Mareike C. Janiak ,
Martin Kuhlwilm ,
Joseph D. Orkin ,
Thomas Bataillon ,
Shivakumara Manu ,
Alejandro Valenzuela ,
Juraj Bergman ,
Marjolaine Rousselle ,
Felipe Ennes Silva ,
Lidia Agueda ,
Julie Blanc ,
Marta Gut ,
Dorien de Vries
and 60 other authors
,
Hong Gao ,
Mareike C. Janiak ,
Martin Kuhlwilm ,
Joseph D. Orkin ,
Thomas Bataillon ,
Shivakumara Manu ,
Alejandro Valenzuela ,
Juraj Bergman ,
Marjolaine Rousselle ,
Felipe Ennes Silva ,
Lidia Agueda ,
Julie Blanc ,
Marta Gut ,
Dorien de Vries
and 60 other authors
A global catalog of whole-genome diversity from 233 primate species
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Erik F. Sørensen ,
R. Alan Harris ,
Liye Zhang ,
Muthuswamy Raveendran ,
Lukas F. K. Kuderna ,
Jerilyn A. Walker,
Jessica M. Storer ,
Martin Kuhlwilm ,
Claudia Fontsere ,
Lakshmi Seshadri,
Christina M. Bergey ,
Andrew S. Burrell,
Juraj Bergman ,
Jane E. Phillips-Conroy ,
Fekadu Shiferaw
and 17 other authors
,
R. Alan Harris ,
Liye Zhang ,
Muthuswamy Raveendran ,
Lukas F. K. Kuderna ,
Jerilyn A. Walker,
Jessica M. Storer ,
Martin Kuhlwilm ,
Claudia Fontsere ,
Lakshmi Seshadri,
Christina M. Bergey ,
Andrew S. Burrell,
Juraj Bergman ,
Jane E. Phillips-Conroy ,
Fekadu Shiferaw
and 17 other authors
Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons
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Yong Shao ,
Long Zhou ,
Fang Li ,
Lan Zhao ,
Bao-Lin Zhang ,
Feng Shao ,
Jia-Wei Chen,
Chun-Yan Chen ,
Xupeng Bi ,
Xiao-Lin Zhuang ,
Hong-Liang Zhu,
Jiang Hu ,
Zongyi Sun ,
Xin Li,
Depeng Wang
and 28 other authors
,
Long Zhou ,
Fang Li ,
Lan Zhao ,
Bao-Lin Zhang ,
Feng Shao ,
Jia-Wei Chen,
Chun-Yan Chen ,
Xupeng Bi ,
Xiao-Lin Zhuang ,
Hong-Liang Zhu,
Jiang Hu ,
Zongyi Sun ,
Xin Li,
Depeng Wang
and 28 other authors
Phylogenomic analyses provide insights into primate evolution
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Hong Gao ,
Tobias Hamp,
Jeffrey Ede,
Joshua G. Schraiber,
Jeremy McRae ,
Moriel Singer-Berk ,
Yanshen Yang,
Anastasia S. D. Dietrich ,
Petko P. Fiziev ,
Lukas F. K. Kuderna ,
Laksshman Sundaram ,
Yibing Wu,
Aashish Adhikari ,
Yair Field ,
Chen Chen
and 87 other authors
,
Tobias Hamp,
Jeffrey Ede,
Joshua G. Schraiber,
Jeremy McRae ,
Moriel Singer-Berk ,
Yanshen Yang,
Anastasia S. D. Dietrich ,
Petko P. Fiziev ,
Lukas F. K. Kuderna ,
Laksshman Sundaram ,
Yibing Wu,
Aashish Adhikari ,
Yair Field ,
Chen Chen
and 87 other authors
The landscape of tolerated genetic variation in humans and primates
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2022
Richard J. Wang ,
Yadira Peña-Garcia,
Madeleine G. Bibby,
Muthuswamy Raveendran ,
R. Alan Harris ,
Heiko T. Jansen ,
Charles T. Robbins,
Jeffrey Rogers ,
Joanna L. Kelley ,
Matthew W. Hahn
,
Yadira Peña-Garcia,
Madeleine G. Bibby,
Muthuswamy Raveendran ,
R. Alan Harris ,
Heiko T. Jansen ,
Charles T. Robbins,
Jeffrey Rogers ,
Joanna L. Kelley ,
Matthew W. Hahn
Examining the Effects of Hibernation on Germline Mutation Rates in Grizzly Bears
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Nejla Ozirmak Lermi ,
Stanton B. Gray ,
Charles M. Bowen ,
Laura Reyes-Uribe ,
Beth K. Dray ,
Nan Deng ,
R. Alan Harris,
R. Alan Harris ,
Muthuswamy Raveendran,
Fernando Benavides ,
Carolyn L. Hodo ,
Melissa W. Taggart ,
Karen Colbert Maresso,
Karen Colbert Maresso,
Krishna M. Sinha
and 2 other authors
Download from doi.org
,
Stanton B. Gray ,
Charles M. Bowen ,
Laura Reyes-Uribe ,
Beth K. Dray ,
Nan Deng ,
R. Alan Harris,
R. Alan Harris ,
Muthuswamy Raveendran,
Fernando Benavides ,
Carolyn L. Hodo ,
Melissa W. Taggart ,
Karen Colbert Maresso,
Karen Colbert Maresso,
Krishna M. Sinha
and 2 other authors
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Kenneth L. Chiou ,
Mareike C. Janiak ,
India A. Schneider-Crease ,
Sharmi Sen ,
Ferehiwot Ayele,
Idrissa S. Chuma,
Sascha Knauf ,
Alemayehu Lemma,
Anthony V. Signore ,
Anthony M. D’Ippolito,
Belayneh Abebe,
Abebaw Azanaw Haile,
Fanuel Kebede,
Peter J. Fashing,
Nga Nguyen
and 14 other authors
,
Mareike C. Janiak ,
India A. Schneider-Crease ,
Sharmi Sen ,
Ferehiwot Ayele,
Idrissa S. Chuma,
Sascha Knauf ,
Alemayehu Lemma,
Anthony V. Signore ,
Anthony M. D’Ippolito,
Belayneh Abebe,
Abebaw Azanaw Haile,
Fanuel Kebede,
Peter J. Fashing,
Nga Nguyen
and 14 other authors
Genomic signatures of high-altitude adaptation and chromosomal polymorphism in geladas
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R. Alan Harris ,
Muthuswamy Raveendran ,
Dustin T. Lyfoung ,
Fritz J. Sedlazeck ,
Medhat Mahmoud ,
Trent M. Prall ,
Julie A. Karl ,
Harshavardhan Doddapaneni ,
Qingchang Meng ,
Yi Han ,
Donna Muzny ,
Roger W. Wiseman ,
David H. O'Connor ,
Jeffrey Rogers
Download from doi.org
,
Muthuswamy Raveendran ,
Dustin T. Lyfoung ,
Fritz J. Sedlazeck ,
Medhat Mahmoud ,
Trent M. Prall ,
Julie A. Karl ,
Harshavardhan Doddapaneni ,
Qingchang Meng ,
Yi Han ,
Donna Muzny ,
Roger W. Wiseman ,
David H. O'Connor ,
Jeffrey Rogers
Download from doi.org
2021
Kira H. Lin ,
Tu Tran,
Soohyun Kim,
Sangwan Park ,
Jiajia Chen,
J. Timothy Stout,
Rui Chen ,
Jeffrey Rogers ,
Glenn Yiu ,
Sara Thomasy ,
Ala Moshiri
,
Tu Tran,
Soohyun Kim,
Sangwan Park ,
Jiajia Chen,
J. Timothy Stout,
Rui Chen ,
Jeffrey Rogers ,
Glenn Yiu ,
Sara Thomasy ,
Ala Moshiri
Age-related changes in the rhesus macaque eye
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Thomas T. Tapmeier ,
Nilufer Rahmioglu ,
Jianghai Lin,
Bianca De Leo,
Maik Obendorf ,
Muthuswamy Raveendran ,
Oliver M. Fischer,
Cemsel Bafligil ,
Manman Guo ,
Ronald Alan Harris ,
Holger Hess-Stumpp ,
Alexis Laux-Biehlmann,
Ernesto Lowy ,
Gerton Lunter ,
Jessica Malzahn
and 19 other authors
,
Nilufer Rahmioglu ,
Jianghai Lin,
Bianca De Leo,
Maik Obendorf ,
Muthuswamy Raveendran ,
Oliver M. Fischer,
Cemsel Bafligil ,
Manman Guo ,
Ronald Alan Harris ,
Holger Hess-Stumpp ,
Alexis Laux-Biehlmann,
Ernesto Lowy ,
Gerton Lunter ,
Jessica Malzahn
and 19 other authors
Neuropeptide S receptor 1 is a nonhormonal treatment target in endometriosis
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Elaine E. Guevara ,
Timothy H. Webster ,
Richard R. Lawler,
Brenda J. Bradley ,
Lydia K. Greene ,
Jeannin Ranaivonasy,
Joelisoa Ratsirarson,
R. Alan Harris ,
Yue Liu ,
Shwetha Murali,
Muthuswamy Raveendran ,
Daniel S. T. Hughes ,
Donna M. Muzny ,
Anne D. Yoder,
Kim C. Worley
and 1 other authors
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,
Timothy H. Webster ,
Richard R. Lawler,
Brenda J. Bradley ,
Lydia K. Greene ,
Jeannin Ranaivonasy,
Joelisoa Ratsirarson,
R. Alan Harris ,
Yue Liu ,
Shwetha Murali,
Muthuswamy Raveendran ,
Daniel S. T. Hughes ,
Donna M. Muzny ,
Anne D. Yoder,
Kim C. Worley
and 1 other authors
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Amanda D. Melin ,
Joseph D. Orkin ,
Mareike C. Janiak ,
Alejandro Valenzuela ,
Lukas Kuderna ,
Chiea Chuen Khor ,
Frank Marrone ,
Weng Khong Lim ,
Dietmar Zinner ,
Jessica G. H. Lee,
Hasinala Ramangason ,
Patrick Tan,
Alphonse Zaramody,
Julie E. Horvath ,
Govindhaswamy Umapathy
and 24 other authors
,
Joseph D. Orkin ,
Mareike C. Janiak ,
Alejandro Valenzuela ,
Lukas Kuderna ,
Chiea Chuen Khor ,
Frank Marrone ,
Weng Khong Lim ,
Dietmar Zinner ,
Jessica G. H. Lee,
Hasinala Ramangason ,
Patrick Tan,
Alphonse Zaramody,
Julie E. Horvath ,
Govindhaswamy Umapathy
and 24 other authors
Variation in predicted COVID‐19 risk among lemurs and lorises
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2020
Wesley C. Warren ,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility
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Dan Vanderpool ,
Bui Quang Minh,
Robert Lanfear ,
Daniel Hughes,
Shwetha Murali,
R. Alan Harris ,
Muthuswamy Raveendran ,
Donna M. Muzny,
Mark S. Hibbins ,
Robert J. Williamson ,
Richard A. Gibbs,
Kim C. Worley ,
Jeffrey Rogers ,
Matthew W. Hahn
,
Bui Quang Minh,
Robert Lanfear ,
Daniel Hughes,
Shwetha Murali,
R. Alan Harris ,
Muthuswamy Raveendran ,
Donna M. Muzny,
Mark S. Hibbins ,
Robert J. Williamson ,
Richard A. Gibbs,
Kim C. Worley ,
Jeffrey Rogers ,
Matthew W. Hahn
Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression
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Marina Brasó-Vives ,
Inna S. Povolotskaya ,
Diego A. Hartasánchez ,
Xavier Farré ,
Marcos Fernandez-Callejo ,
Muthuswamy Raveendran,
R. Alan Harris ,
Douglas L. Rosene,
Belen Lorente-Galdos ,
Arcadi Navarro,
Tomas Marques-Bonet ,
Jeffrey Rogers ,
David Juan
,
Inna S. Povolotskaya ,
Diego A. Hartasánchez ,
Xavier Farré ,
Marcos Fernandez-Callejo ,
Muthuswamy Raveendran,
R. Alan Harris ,
Douglas L. Rosene,
Belen Lorente-Galdos ,
Arcadi Navarro,
Tomas Marques-Bonet ,
Jeffrey Rogers ,
David Juan
Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)
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