Researcher
Leonard Harris
Vanderbilt University School of Medicine
Statistics
18 papers found
All papers authored by Leonard Harris
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Danielle B. Gutierrez,
Melissa A. Farrow,
Nicole Muszynski,
Tina Tsui,
Jeremy L. Norris,
Richard M. Caprioli,
John P. Wikswo,
Carlos F. Lopez
A computational framework to explore cellular response mechanisms from multi-omics datasets
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Rachel Leander ,
Vito Quaranta,
Leonard A. Harris ,
Darren R. Tyson
Download from doi.org
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Marco S. Nobile,
James C. Pino,
Alexander L. R. Lubbock,
Daniela Besozzi,
Giancarlo Mauri,
Paolo Cazzaniga,
Carlos F. Lopez
GPU-powered model analysis with PySB/cupSODA
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Justin S. Hogg,
José-Juan Tapia,
John A. P. Sekar,
Sanjana Gupta,
Ilya Korsunsky,
Arshi Arora,
Dipak Barua,
Robert P. Sheehan,
James R. Faeder
BioNetGen 2.2: advances in rule-based modeling
Download from arxiv.org
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Peter L. Frick,
Shawn P. Garbett,
Keisha N. Hardeman,
B. Bishal Paudel,
Carlos F. Lopez,
Vito Quaranta,
Darren R. Tyson
An unbiased metric of antiproliferative drug effect in vitro
Download from europepmc.org
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James R. Faeder,
William S. Hlavacek
Modeling for (physical) biologists: An introduction to the rule-based approach
Download from iopscience.iop.org
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Jose-Juan Tapia,
James R. Faeder,
G. Elisabeta Marai,
G. Elisabeta Marai
MOSBIE: a tool for comparison and analysis of rule-based biochemical models
Download from link.springer.com
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Chang-Shung Tung,
James R. Faeder,
Carlos F. Lopez,
William S. Hlavacek
Download from www.ncbi.nlm.nih.gov
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Lori J. Stover,
Niketh S. Nair ,
James R. Faeder
Exact hybrid particle/population simulation of rule-based models of biochemical systems
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Paulette Clancy
Accurate implementation of leaping in space: The spatial partitioned-leaping algorithm
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Justin S. Hogg,
James R. Faeder
Compartmental rule-based modeling of biochemical systems
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Aaron M. Piccirilli,
Emily R. Majusiak,
Paulette Clancy
Quantifying stochastic effects in biochemical reaction networks using partitioned leaping
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Sumit Kumar Jha,
Axel Legay
Download from citeseerx.ist.psu.edu
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Paulette Clancy
A "partitioned leaping" approach for multiscale modeling of chemical reaction dynamics
Download from arxiv.org
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