All papers authored by Danielle Swaney
Refreshing results…
2024
Lois M. Kelly,
Justine C. Rutter 
,
Kevin H. Lin,
Frank Ling,
Matthieu Duchmann,
Emmanuelle Latour,
Nadia Arang,
Hélène Pasquer,
Duong Ho Nhat,
Juliette Charles,
Shane T. Killarney ,
Hazel X. Ang ,
Federica Namor,
Cécile Culeux,
Bérangère Lombard
and 20 other authors
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,
Kevin H. Lin,
Frank Ling,
Matthieu Duchmann,
Emmanuelle Latour,
Nadia Arang,
Hélène Pasquer,
Duong Ho Nhat,
Juliette Charles,
Shane T. Killarney ,
Hazel X. Ang ,
Federica Namor,
Cécile Culeux,
Bérangère Lombard
and 20 other authors
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2023
Kelsey M. Haas ,
Michael J. McGregor,
Mehdi Bouhaddou,
Benjamin J. Polacco ,
Eun-Young Kim ,
Thong T. Nguyen,
Billy W. Newton,
Matthew Urbanowski,
Heejin Kim,
Michael A. P. Williams,
Veronica V. Rezelj,
Alexandra Hardy,
Andrea Fossati,
Erica J. Stevenson,
Ellie Sukerman
and 40 other authors
,
Michael J. McGregor,
Mehdi Bouhaddou,
Benjamin J. Polacco ,
Eun-Young Kim ,
Thong T. Nguyen,
Billy W. Newton,
Matthew Urbanowski,
Heejin Kim,
Michael A. P. Williams,
Veronica V. Rezelj,
Alexandra Hardy,
Andrea Fossati,
Erica J. Stevenson,
Ellie Sukerman
and 40 other authors
Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets
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Zeynep Cakir ,
Samuel J. Lord,
Yuan Zhou,
Gwendolyn M. Jang ,
Benjamin J. Polacco ,
Manon Eckhardt ,
David Jimenez-Morales ,
Billy W. Newton,
Alexandre da Cruz,
Adam L. Orr ,
Jeffrey R. Johnson,
R. Dyche Mullins,
Nevan J. Krogan,
R. Dyche Mullins,
Robert W. Mahley
and 1 other authors
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,
Samuel J. Lord,
Yuan Zhou,
Gwendolyn M. Jang ,
Benjamin J. Polacco ,
Manon Eckhardt ,
David Jimenez-Morales ,
Billy W. Newton,
Alexandre da Cruz,
Adam L. Orr ,
Jeffrey R. Johnson,
R. Dyche Mullins,
Nevan J. Krogan,
R. Dyche Mullins,
Robert W. Mahley
and 1 other authors
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2022
Patrick C. O'Leary ,
Huadong Chen ,
Yagmur U. Doruk ,
Tess Williamson ,
Benjamin Polacco ,
Andrew S. McNeal ,
Tanushree Shenoy ,
Nupura Kale ,
Julia Carnevale ,
Erica Stevenson ,
David A. Quigley ,
Jonathan Chou ,
Felix Y. Feng ,
Danielle L. Swaney ,
Nevan J. Krogan
and 3 other authors
,
Huadong Chen ,
Yagmur U. Doruk ,
Tess Williamson ,
Benjamin Polacco ,
Andrew S. McNeal ,
Tanushree Shenoy ,
Nupura Kale ,
Julia Carnevale ,
Erica Stevenson ,
David A. Quigley ,
Jonathan Chou ,
Felix Y. Feng ,
Danielle L. Swaney ,
Nevan J. Krogan
and 3 other authors
Resistance to ATR Inhibitors Is Mediated by Loss of the Nonsense-Mediated Decay Factor UPF2
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2021
Lucy G. Thorne ,
Mehdi Bouhaddou,
Ann-Kathrin Reuschl,
Lorena Zuliani-Alvarez,
Ben Polacco ,
Adrian Pelin,
Jyoti Batra,
Matthew V. X. Whelan,
Myra Hosmillo,
Andrea Fossati ,
Roberta Ragazzini ,
Irwin Jungreis ,
Manisha Ummadi,
Ajda Rojc,
Jane Turner
and 28 other authors
,
Mehdi Bouhaddou,
Ann-Kathrin Reuschl,
Lorena Zuliani-Alvarez,
Ben Polacco ,
Adrian Pelin,
Jyoti Batra,
Matthew V. X. Whelan,
Myra Hosmillo,
Andrea Fossati ,
Roberta Ragazzini ,
Irwin Jungreis ,
Manisha Ummadi,
Ajda Rojc,
Jane Turner
and 28 other authors
Evolution of enhanced innate immune evasion by SARS-CoV-2
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Tina Perica ,
Christopher J. P. Mathy ,
Jiewei Xu,
Gwendolyn Μ. Jang,
Yang Zhang,
Robyn Kaake,
Noah Ollikainen,
Hannes Braberg ,
Danielle L. Swaney ,
David G. Lambright,
Mark J. S. Kelly,
Nevan J. Krogan ,
Tanja Kortemme
,
Christopher J. P. Mathy ,
Jiewei Xu,
Gwendolyn Μ. Jang,
Yang Zhang,
Robyn Kaake,
Noah Ollikainen,
Hannes Braberg ,
Danielle L. Swaney ,
David G. Lambright,
Mark J. S. Kelly,
Nevan J. Krogan ,
Tanja Kortemme
Systems-level effects of allosteric perturbations to a model molecular switch
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Fan Zheng ,
Marcus R. Kelly ,
Dana J. Ramms ,
Marissa L. Heintschel ,
Kai Tao,
Beril Tutuncuoglu ,
John J. Lee ,
Keiichiro Ono ,
Helene Foussard ,
Michael Chen ,
Kari A. Herrington ,
Erica Silva ,
Sophie N. Liu ,
Jing Chen,
Christopher Churas
and 17 other authors
,
Marcus R. Kelly ,
Dana J. Ramms ,
Marissa L. Heintschel ,
Kai Tao,
Beril Tutuncuoglu ,
John J. Lee ,
Keiichiro Ono ,
Helene Foussard ,
Michael Chen ,
Kari A. Herrington ,
Erica Silva ,
Sophie N. Liu ,
Jing Chen,
Christopher Churas
and 17 other authors
Interpretation of cancer mutations using a multiscale map of protein systems
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Danielle L. Swaney ,
Dana J. Ramms ,
Zhiyong Wang ,
Jisoo Park ,
Yusuke Goto,
Margaret Soucheray ,
Neil Bhola,
Kyumin Kim ,
Fan Zheng ,
Yan Zeng,
Michael McGregor ,
Kari A. Herrington ,
Rachel O’Keefe ,
Nan Jin,
Nathan K. VanLandingham
and 13 other authors
,
Dana J. Ramms ,
Zhiyong Wang ,
Jisoo Park ,
Yusuke Goto,
Margaret Soucheray ,
Neil Bhola,
Kyumin Kim ,
Fan Zheng ,
Yan Zeng,
Michael McGregor ,
Kari A. Herrington ,
Rachel O’Keefe ,
Nan Jin,
Nathan K. VanLandingham
and 13 other authors
A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity
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Minkyu Kim ,
Jisoo Park ,
Mehdi Bouhaddou ,
Kyumin Kim ,
Ajda Rojc ,
Maya Modak ,
Margaret Soucheray ,
Michael J. McGregor ,
Patrick O’Leary ,
Denise Wolf,
Erica Stevenson,
Tzeh Keong Foo ,
Dominique Mitchell ,
Kari A. Herrington ,
Denise P. Muñoz
and 13 other authors
,
Jisoo Park ,
Mehdi Bouhaddou ,
Kyumin Kim ,
Ajda Rojc ,
Maya Modak ,
Margaret Soucheray ,
Michael J. McGregor ,
Patrick O’Leary ,
Denise Wolf,
Erica Stevenson,
Tzeh Keong Foo ,
Dominique Mitchell ,
Kari A. Herrington ,
Denise P. Muñoz
and 13 other authors
A protein interaction landscape of breast cancer
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2020
David E. Gordon ,
Gwendolyn M. Jang,
Mehdi Bouhaddou,
Jiewei Xu,
Kirsten Obernier ,
Kris M. White ,
Matthew J. O’Meara ,
Veronica V. Rezelj,
Jeffrey Z. Guo,
Danielle L. Swaney ,
Tia A. Tummino ,
Ruth Huettenhain,
Ruth Hüttenhain ,
Robyn M. Kaake,
Alicia L. Richards
and 111 other authors
,
Gwendolyn M. Jang,
Mehdi Bouhaddou,
Jiewei Xu,
Kirsten Obernier ,
Kris M. White ,
Matthew J. O’Meara ,
Veronica V. Rezelj,
Jeffrey Z. Guo,
Danielle L. Swaney ,
Tia A. Tummino ,
Ruth Huettenhain,
Ruth Hüttenhain ,
Robyn M. Kaake,
Alicia L. Richards
and 111 other authors
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
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Jonathan M. Budzik ,
Danielle L. Swaney ,
David Jimenez-Morales,
Jeffrey R. Johnson ,
Nicholas E. Garelis,
Teresa Repasy,
Allison W. Roberts ,
Lauren M. Popov,
Trevor J. Parry,
Dexter Pratt,
Trey Ideker,
Nevan J. Krogan,
Jeffery S. Cox
Download from doi.org
,
Danielle L. Swaney ,
David Jimenez-Morales,
Jeffrey R. Johnson ,
Nicholas E. Garelis,
Teresa Repasy,
Allison W. Roberts ,
Lauren M. Popov,
Trevor J. Parry,
Dexter Pratt,
Trey Ideker,
Nevan J. Krogan,
Jeffery S. Cox
Download from doi.org
2019
Kevin Lou ,
Veronica Steri,
Alex Y. Ge,
Y. Christina Hwang ,
Christopher H. Yogodzinski,
Arielle R. Shkedi ,
Alex L. M. Choi,
Dominique C. Mitchell ,
Danielle L. Swaney ,
Byron Hann ,
John D. Gordan ,
Kevan M. Shokat ,
Luke A. Gilbert
,
Veronica Steri,
Alex Y. Ge,
Y. Christina Hwang ,
Christopher H. Yogodzinski,
Arielle R. Shkedi ,
Alex L. M. Choi,
Dominique C. Mitchell ,
Danielle L. Swaney ,
Byron Hann ,
John D. Gordan ,
Kevan M. Shokat ,
Luke A. Gilbert
KRAS G12C inhibition produces a driver-limited state revealing collateral dependencies
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2018
Manon Eckhardt ,
Wei Zhang ,
Andrew M. Gross,
John Von Dollen,
Jeffrey R. Johnson ,
Kathleen E. Franks-Skiba,
Danielle L. Swaney ,
Tasha L. Johnson ,
Gwendolyn M. Jang,
Priya S. Shah,
Toni M. Brand,
Jacques Archambault ,
Jason F. Kreisberg ,
Jennifer R. Grandis,
Trey Ideker
and 1 other authors
,
Wei Zhang ,
Andrew M. Gross,
John Von Dollen,
Jeffrey R. Johnson ,
Kathleen E. Franks-Skiba,
Danielle L. Swaney ,
Tasha L. Johnson ,
Gwendolyn M. Jang,
Priya S. Shah,
Toni M. Brand,
Jacques Archambault ,
Jason F. Kreisberg ,
Jennifer R. Grandis,
Trey Ideker
and 1 other authors
Multiple Routes to Oncogenesis are Promoted by the Human Papillomavirus-Host Protein Network
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