Timothy Griffin - Dissemin

Papers authored by Timothy Griffin

This paper is made freely available by the publisher.

2016 Yee Mon Thu, Susan Kaye Van Riper, LeeAnn Higgins, Tianji Zhang, Jordan Robert Becker, Todd William Markowski, Hai Dang Nguyen

, Timothy Jon Griffin

, Anja Katrin Bielinsky

Slx5/Slx8 Promotes Replication Stress Tolerance by Facilitating Mitotic Progression

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

Kyle J. Anderson, Katie L. Vermillion, Pratik Jagtap, James E. Johnson, Timothy J. Griffin

, Matthew T. Andrews

Proteogenomic analysis of a hibernating mammal indicates contribution of skeletal muscle physiology to the hibernation phenotype

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Susan K. Van Riper, LeeAnn Higgins, John V. Carlis, Timothy J. Griffin

RIPPER: A Framework for MS1 Only Metabolomics and Proteomics Label-Free Relative Quantification

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2015 Joel D. Rudney, Pratik D. Jagtap, Cavan S. Reilly, Ruoqiong Chen, Todd W. Markowski, LeeAnn Higgins, James E. Johnson, Timothy J. Griffin

Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries

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Katie L. Vermillion, Pratik Jagtap, James E. Johnson, Timothy J. Griffin

, Matthew T. Andrews

Characterizing cardiac molecular mechanisms of mammalian hibernation via quantitative proteogenomics

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Pratik Jagtap, Tim Griffin

, Jean Armengaud

Microbiomes – Embracing complexity

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This paper was not found in any repository, but could be made available legally by the author.

David R. Barnidge, Thomas P. Krick, Timothy J. Griffin

, David L. Murray

Using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry to detect monoclonal immunoglobulin light chains in serum and urine

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Jae-Woong Chang, Wei Zhang, Hsin-Sung Yeh, Ebbing P. de Jong, Semo Jun, Kwan-Hyun Kim, Sun S. Bae, Kenneth Beckman

, Tae Hyun Hwang, Kye-Seong Kim, Do-Hyung Kim, Timothy J. Griffin

, Rui Kuang, Jeongsik Yong

mRNA 3′-UTR shortening is a molecular signature of mTORC1 activation

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Pratik D. Jagtap, Alan Blakely, Kevin Murray, Shaun Stewart, Joel Kooren, James E. Johnson, Nelson L. Rhodus, Joel Rudney, Timothy J. Griffin

Metaproteomic analysis using the Galaxy framework

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Timothy J. Griffin

The human saliva proteome: overview and emerging methods for characterization

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Jorrit Boekel, John M. Chilton, Ira R. Cooke

, Peter L. Horvatovich

, Pratik D. Jagtap, Lukas Käll, Janne Lehtiö, Pieter Lukasse, Perry D. Moerland

, Timothy J. Griffin

Multi-omic data analysis using Galaxy

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2014 Pratik Dilip Jagtap, James E. Johnson, Getiria Onsongo, Fredrik W. Sadler, Kevin Murray, Yuanbo Wang, Gloria M. Shenykman, Gloria M. Sheynkman, Sricharan Bandhakavi, Lloyd M. Smith, Timothy J. Griffin

Flexible and Accessible Workflows for Improved Proteogenomic Analysis Using the Galaxy Framework

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Timothy J. Griffin

Human saliva proteome: an overview

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Ya Yang, Nelson L. Rhodus, Frank G. Ondrey, Beverly R. K. Wuertz, Xiaobing Chen, Yaqin Zhu, Timothy J. Griffin

Quantitative Proteomic Analysis of Oral Brush Biopsies Identifies Secretory Leukocyte Protease Inhibitor as a Promising, Mechanism-Based Oral Cancer Biomarker

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Susan K. Van Riper, Ebbing P. de Jong, LeeAnn Higgins, John V. Carlis, Timothy J. Griffin

Improved Intensity-Based Label-Free Quantification via Proximity-Based Intensity Normalization (PIN)

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Kristin Lm Boylan, Somaieh Afiuni-Zadeh, Melissa A. Geller, Kayla Hickey, Timothy J. Griffin

, Stefan E. Pambuccian, Amy Pn Skubitz

A feasibility study to identify proteins in the residual Pap test fluid of women with normal cytology by mass spectrometry-based proteomics

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Gloria M. Sheynkman, James E. Johnson, Pratik D. Jagtap, Michael R. Shortreed, Getiria Onsongo, Brian L. Frey, Timothy J. Griffin

, Lloyd M. Smith

Using Galaxy-P to leverage RNA-Seq for the discovery of novel protein variations

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2013 V. Thumbigere-Math, Ep de Jong, Bs Michalowicz, Ep Jong, Tj Griffin

, Dl Basi, Pj Hughes, Ml Tsai, Kk Swenson, L. Rockwell, R. Gopalakrishnan

Salivary proteomics in bisphosphonate-related osteonecrosis of the jaw

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Timothy J. Griffin

The proteome of human saliva

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Pratik Jagtap, Jill Goslinga, Joel A. Kooren, Thomas McGowan, Matthew S. Wroblewski, Sean L. Seymour, Timothy J. Griffin

A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies

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Papers authored by Timothy Griffin