All papers authored by Nuno Rodrigues Faria
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2022
Andrea Brizzi 
,
Charles Whittaker ,
Luciana M. S. Servo,
Iwona Hawryluk ,
Carlos A. Prete,
William M. de Souza ,
Renato S. Aguiar,
Leonardo J. T. Araujo ,
Leonardo S. Bastos ,
Alexandra Blenkinsop ,
Lewis F. Buss,
Darlan Candido,
Marcia C. Castro ,
Silvia F. Costa ,
Julio Croda
and 26 other authors
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,
Charles Whittaker ,
Luciana M. S. Servo,
Iwona Hawryluk ,
Carlos A. Prete,
William M. de Souza ,
Renato S. Aguiar,
Leonardo J. T. Araujo ,
Leonardo S. Bastos ,
Alexandra Blenkinsop ,
Lewis F. Buss,
Darlan Candido,
Marcia C. Castro ,
Silvia F. Costa ,
Julio Croda
and 26 other authors
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Andrea Brizzi ,
Charles Whittaker ,
Luciana M. S. Servo,
Iwona Hawryluk ,
Carlos A. Prete,
William M. de Souza ,
Renato S. Aguiar,
Leonardo J. T. Araujo ,
Leonardo S. Bastos ,
Alexandra Blenkinsop ,
Lewis F. Buss,
Darlan Candido,
Marcia C. Castro ,
Silvia F. Costa ,
Julio Croda
and 26 other authors
,
Charles Whittaker ,
Luciana M. S. Servo,
Iwona Hawryluk ,
Carlos A. Prete,
William M. de Souza ,
Renato S. Aguiar,
Leonardo J. T. Araujo ,
Leonardo S. Bastos ,
Alexandra Blenkinsop ,
Lewis F. Buss,
Darlan Candido,
Marcia C. Castro ,
Silvia F. Costa ,
Julio Croda
and 26 other authors
Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals
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Ingra M. Claro ,
Mariana S. Ramundo ,
Thais M. Coletti ,
Camila A. M. da Silva ,
Ian N. Valenca ,
Darlan S. Candido,
Flavia C. S. Sales ,
Erika R. Manuli,
Jaqueline G. de Jesus ,
Anderson de Paula,
Alvina Clara Felix,
Pamela dos Santos Andrade,
Mariana C. Pinho,
William M. Souza ,
Mariene R. Amorim
and 7 other authors
,
Mariana S. Ramundo ,
Thais M. Coletti ,
Camila A. M. da Silva ,
Ian N. Valenca ,
Darlan S. Candido,
Flavia C. S. Sales ,
Erika R. Manuli,
Jaqueline G. de Jesus ,
Anderson de Paula,
Alvina Clara Felix,
Pamela dos Santos Andrade,
Mariana C. Pinho,
William M. Souza ,
Mariene R. Amorim
and 7 other authors
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing
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Sabrina L. Li ,
Rafael H. M. Pereira ,
Carlos A. Prete Jr ,
Alexander E. Zarebski ,
Lucas Emanuel ,
Pedro J. H. Alves ,
Pedro S. Peixoto ,
Carlos K. V. Braga ,
Andreza Aruska de Souza Santos ,
William M. de Souza ,
Rogerio J. Barbosa ,
Lewis F. Buss ,
Alfredo Mendrone ,
Cesar de Almeida-Neto ,
Suzete C. Ferreira
and 8 other authors
,
Rafael H. M. Pereira ,
Carlos A. Prete Jr ,
Alexander E. Zarebski ,
Lucas Emanuel ,
Pedro J. H. Alves ,
Pedro S. Peixoto ,
Carlos K. V. Braga ,
Andreza Aruska de Souza Santos ,
William M. de Souza ,
Rogerio J. Barbosa ,
Lewis F. Buss ,
Alfredo Mendrone ,
Cesar de Almeida-Neto ,
Suzete C. Ferreira
and 8 other authors
Higher risk of death from COVID-19 in low-income and non-White populations of São Paulo, Brazil
Download from doi.org
2020
Xianding Deng,
Asmeeta Achari,
Scot Federman,
Guixia Yu,
Sneha Somasekar,
Inês Bártolo,
Shigeo Yagi,
Placide Mbala-Kingebeni,
Jimmy Kapetshi,
Steve Ahuka-Mundeke,
Jean-Jacques Muyembe-Tamfum,
Asim A. Ahmed,
Vijay Ganesh,
Manasi Tamhankar,
Jean L. Patterson
and 25 other authors
Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance
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Jaqueline Goes de Jesus ,
Claudio Sacchi,
Darlan da Silva Candido ,
Ingra Morales Claro ,
Flávia Cristina Silva Sales ,
Erika Regina Manuli ,
Daniela Bernardes Borges da Silva,
Terezinha Maria de Paiva,
Margarete Aparecida Benega Pinho,
Katia Correa de Oliveira Santos,
Sarah Catherine Hill ,
Renato Santana Aguiar,
Filipe Romero,
Fabiana Cristina Pereira dos Santos,
Claudia Regina Gonçalves
and 9 other authors
,
Claudio Sacchi,
Darlan da Silva Candido ,
Ingra Morales Claro ,
Flávia Cristina Silva Sales ,
Erika Regina Manuli ,
Daniela Bernardes Borges da Silva,
Terezinha Maria de Paiva,
Margarete Aparecida Benega Pinho,
Katia Correa de Oliveira Santos,
Sarah Catherine Hill ,
Renato Santana Aguiar,
Filipe Romero,
Fabiana Cristina Pereira dos Santos,
Claudia Regina Gonçalves
and 9 other authors
Importation and early local transmission of COVID-19 in Brazil, 2020
Download from doi.org
2019
Moritz U. G. Kraemer ,
Robert C. Reiner,
Oliver J. Brady,
Jane P. Messina,
Marius Gilbert,
David M. Pigott,
Dingdong Yi,
Kimberly Johnson,
Lucas Earl,
Laurie B. Marczak,
Shreya Shirude,
Nicole Davis Weaver ,
Donal Bisanzio,
T. Alex Perkins,
Shengjie Lai
and 26 other authors
,
Robert C. Reiner,
Oliver J. Brady,
Jane P. Messina,
Marius Gilbert,
David M. Pigott,
Dingdong Yi,
Kimberly Johnson,
Lucas Earl,
Laurie B. Marczak,
Shreya Shirude,
Nicole Davis Weaver ,
Donal Bisanzio,
T. Alex Perkins,
Shengjie Lai
and 26 other authors
Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus
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2014
Marcio R. T; JFA; CORA; Palacios Gustavo; Faria Nuno Rodrigues; Sousa Edivaldo Costa; Pantoja Jamilla A; Rodrigues Sueli G; Carvalho Valéria L; Medeiros Daniele B. A; Savji Nazir; Baele Guy; U0075702; Suchard Marc A; Lemey Philippe; U0036765; Vasconcelos P Nunes,
Gustavo Palacios ,
Edivaldo Costa Sousa,
Nuno Rodriguez Faria ,
Nuno Rodrigues Faria,
Jr. Edivaldo Costa Sousa,
Jamilla A. Pantoja,
Sueli G. Rodrigues,
Valéria L. Carvalho,
Daniele B. A. Medeiros,
Nazir Savji,
Guy Baele,
Marc A. Suchard,
Philippe Lemey,
Pedro F. C. Vasconcelos
and 2 other authors
,
Edivaldo Costa Sousa,
Nuno Rodriguez Faria ,
Nuno Rodrigues Faria,
Jr. Edivaldo Costa Sousa,
Jamilla A. Pantoja,
Sueli G. Rodrigues,
Valéria L. Carvalho,
Daniele B. A. Medeiros,
Nazir Savji,
Guy Baele,
Marc A. Suchard,
Philippe Lemey,
Pedro F. C. Vasconcelos
and 2 other authors
Air Travel Is Associated with Intracontinental Spread of Dengue Virus Serotypes 1–3 in Brazil
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Philippe Lemey,
Andrew Rambaut,
Trevor Bedford,
Nuno Faria ,
Filip Bielejec,
Guy Baele,
Colin A. Russell ,
Derek J. Smith,
Oliver G. Pybus ,
Dirk Brockmann,
Marc A. Suchard
Download from doi.org
,
Filip Bielejec,
Guy Baele,
Colin A. Russell ,
Derek J. Smith,
Oliver G. Pybus ,
Dirk Brockmann,
Marc A. Suchard
Download from doi.org
Daniela Bezemer,
Nuno Rodrigues Faria ,
Amin S. Hassan,
Raph L. Hamers,
Gaudensia Mutua,
Omu Anzala,
Kishor N. Mandaliya,
Patricia A. Cane,
James A. Berkley,
Tobias F. Rinke de Wit,
Carole Lorraine Wallis,
Susan M. Graham ,
Matthew A. Price,
Roel A. Coutinho,
Eduard J. Sanders
,
Amin S. Hassan,
Raph L. Hamers,
Gaudensia Mutua,
Omu Anzala,
Kishor N. Mandaliya,
Patricia A. Cane,
James A. Berkley,
Tobias F. Rinke de Wit,
Carole Lorraine Wallis,
Susan M. Graham ,
Matthew A. Price,
Roel A. Coutinho,
Eduard J. Sanders
HIV Type 1 Transmission Networks Among Men Having Sex with Men and Heterosexuals in Kenya
Download from www.ncbi.nlm.nih.gov
Nuno R. Faria ,
Andrew Rambaut,
Marc A. Suchard,
Guy Baele,
Trevor Bedford,
Melissa J. Ward,
Andrew J. Tatem ,
João D. Sousa,
Nimalan Arinaminpathy,
J. Pepin,
Jacques Pépin,
David Posada,
Martine Peeters,
Oliver G. Pybus ,
Philippe Lemey
,
Andrew Rambaut,
Marc A. Suchard,
Guy Baele,
Trevor Bedford,
Melissa J. Ward,
Andrew J. Tatem ,
João D. Sousa,
Nimalan Arinaminpathy,
J. Pepin,
Jacques Pépin,
David Posada,
Martine Peeters,
Oliver G. Pybus ,
Philippe Lemey
The early spread and epidemic ignition of HIV-1 in human populations
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2013
Lina Josefsson,
Susanne von Stockenstrom,
Nuno R. Faria ,
Elizabeth Sinclair,
Peter Bacchetti,
Maudi Killian,
Lorrie Epling,
Alice Tan,
Terence Ho,
Philippe Lemey,
Wei Shao,
Peter W. Hunt,
Ma Somsouk,
Will Wylie,
Daniel C. Douek
and 7 other authors
Download from doi.org
,
Elizabeth Sinclair,
Peter Bacchetti,
Maudi Killian,
Lorrie Epling,
Alice Tan,
Terence Ho,
Philippe Lemey,
Wei Shao,
Peter W. Hunt,
Ma Somsouk,
Will Wylie,
Daniel C. Douek
and 7 other authors
Download from doi.org
Andrea-Clemencia Pineda-Peña ,
Nuno Rodrigues Faria ,
Stijn Imbrechts,
Pieter Libin,
Ana Barroso Abecasis,
Koen Deforche,
Arley Gómez-López,
Ricardo J. Camacho,
Tulio de Oliveira,
Anne-Mieke Vandamme
Download from doi.org
,
Nuno Rodrigues Faria ,
Stijn Imbrechts,
Pieter Libin,
Ana Barroso Abecasis,
Koen Deforche,
Arley Gómez-López,
Ricardo J. Camacho,
Tulio de Oliveira,
Anne-Mieke Vandamme
Download from doi.org
Nuno Rodrigues Faria ,
Marc A. Suchard,
Andrew Rambaut,
Daniel G. Streicker,
Philippe Lemey
Download from rstb.royalsocietypublishing.org
,
Marc A. Suchard,
Andrew Rambaut,
Daniel G. Streicker,
Philippe Lemey
Download from rstb.royalsocietypublishing.org
Lina Josefsson,
Sarah Palmer,
Nr Faria ,
Philippe Lemey,
Joseph Casazza,
David Ambrozak,
Mary Kearney,
Wei Shao,
Shyamasundaran Kottilil,
Michael Sneller,
John W. Mellors,
Jm Coffin,
Frank Maldarelli
Download from dx.doi.org
,
Philippe Lemey,
Joseph Casazza,
David Ambrozak,
Mary Kearney,
Wei Shao,
Shyamasundaran Kottilil,
Michael Sneller,
John W. Mellors,
Jm Coffin,
Frank Maldarelli
Download from dx.doi.org
Lm de Carvalho,
Lb Santos,
Nr Faria ,
Waldemir de Castro Silveira
,
Waldemir de Castro Silveira
Phylogeography of foot-and-mouth disease virus serotype O in Ecuador.
Download from www.researchgate.net
2012
Mandev S. Gill,
Philippe Lemey,
Nuno R. Faria ,
Andrew Rambaut,
Beth Shapiro,
Marc A. Suchard
,
Andrew Rambaut,
Beth Shapiro,
Marc A. Suchard
Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci
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Marcio Roberto Teixeira Nunes,
Daniele Barbosa de Almeida Medeiros,
Clayton Pereira Silva de Lima,
Eliana Vieira Pinto da Silva,
Nuno Rodrigues Faria ,
Helena Baldez Vasconcelos,
Daniele Barbosa de Almeida Medeiros,
Clayton Pereira Silva de Lima,
Valéria Lima Carvalho,
Eliana Vieira Pinto da Silva,
Jedson Ferreira Cardoso,
Edivaldo Costa Sousa,
Keley Nascimento Barbosa Nunes,
Sueli Guerreiro Rodrigues,
Ana Barroso Abecasis
and 3 other authors
,
Helena Baldez Vasconcelos,
Daniele Barbosa de Almeida Medeiros,
Clayton Pereira Silva de Lima,
Valéria Lima Carvalho,
Eliana Vieira Pinto da Silva,
Jedson Ferreira Cardoso,
Edivaldo Costa Sousa,
Keley Nascimento Barbosa Nunes,
Sueli Guerreiro Rodrigues,
Ana Barroso Abecasis
and 3 other authors
Phylogeography of Dengue Virus Serotype 4, Brazil, 2010–2011
Download from doi.org
Nr Faria ,
Am Vandamme,
Marc A. Suchard,
Ana Abecasis,
João D. Sousa,
Nicaise Ndembi,
Idalina Bonfim,
Rj Camacho,
Philippe Lemey
,
Am Vandamme,
Marc A. Suchard,
Ana Abecasis,
João D. Sousa,
Nicaise Ndembi,
Idalina Bonfim,
Rj Camacho,
Philippe Lemey
Phylodynamics of the HIV-1 CRF02_AG clade in Cameroon.
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