All papers authored by Stephen Schaffner
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2023
Judith U. Oguzie 
,
Brittany A. Petros ,
Paul E. Oluniyi ,
Samar B. Mehta,
Philomena E. Eromon,
Parvathy Nair,
Opeoluwa Adewale-Fasoro,
Peace Damilola Ifoga,
Ikponmwosa Odia,
Andrzej Pastusiak,
Otitoola Shobi Gbemisola,
John Oke Aiyepada,
Eghosasere Anthonia Uyigue,
Akhilomen Patience Edamhande,
Osiemi Blessing
and 24 other authors
,
Brittany A. Petros ,
Paul E. Oluniyi ,
Samar B. Mehta,
Philomena E. Eromon,
Parvathy Nair,
Opeoluwa Adewale-Fasoro,
Peace Damilola Ifoga,
Ikponmwosa Odia,
Andrzej Pastusiak,
Otitoola Shobi Gbemisola,
John Oke Aiyepada,
Eghosasere Anthonia Uyigue,
Akhilomen Patience Edamhande,
Osiemi Blessing
and 24 other authors
Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from Nigeria
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Idowu B. Olawoye ,
Paul E. Oluniyi ,
Judith U. Oguzie ,
Jessica N. Uwanibe,
A. T. Kayode,
Tolulope A. Kayode ,
Testimony J. Olumade ,
Fehintola V. Ajogbasile,
Edyth Parker ,
Philomena E. Eromon,
Priscilla Abechi,
Tope A. Sobajo,
Chinedu A. Ugwu ,
G. Uwem,
Uwem E. George
and 141 other authors
,
Paul E. Oluniyi ,
Judith U. Oguzie ,
Jessica N. Uwanibe,
A. T. Kayode,
Tolulope A. Kayode ,
Testimony J. Olumade ,
Fehintola V. Ajogbasile,
Edyth Parker ,
Philomena E. Eromon,
Priscilla Abechi,
Tope A. Sobajo,
Chinedu A. Ugwu ,
G. Uwem,
Uwem E. George
and 141 other authors
Emergence and spread of two SARS-CoV-2 variants of interest in Nigeria
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2021
Eduan Wilkinson ,
Anne von Gottberg ,
Marta Giovanetti ,
Houriiyah Tegally ,
James E. San ,
Richard Lessels,
David A. Rasmussen ,
Diego Cuadros,
Richard Lessells ,
Darren P. Martin,
Abdel-Rahman N. Zekri ,
Abdoul K. Sangare,
Abdoul-Salam Ouedraogo,
Abechi Priscilla,
Adedotun-Sulaiman Kemi
and 300 other authors
,
Anne von Gottberg ,
Marta Giovanetti ,
Houriiyah Tegally ,
James E. San ,
Richard Lessels,
David A. Rasmussen ,
Diego Cuadros,
Richard Lessells ,
Darren P. Martin,
Abdel-Rahman N. Zekri ,
Abdoul K. Sangare,
Abdoul-Salam Ouedraogo,
Abechi Priscilla,
Adedotun-Sulaiman Kemi
and 300 other authors
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa.
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Yolanda Botti-Lodovico,
Parvathy Nair,
Dolo Nosamiefan,
Matthew Stremlau,
Stephen Schaffner ,
Sebastian V. Agignoae,
John Oke Aiyepada,
Fehintola V. Ajogbasile,
George O. Akpede,
Foday Alhasan,
Kristian G. Andersen,
Danny A. Asogun,
Oladele Oluwafemi Ayodeji,
Aida S. Badiane,
Kayla Barnes
and 96 other authors
,
Sebastian V. Agignoae,
John Oke Aiyepada,
Fehintola V. Ajogbasile,
George O. Akpede,
Foday Alhasan,
Kristian G. Andersen,
Danny A. Asogun,
Oladele Oluwafemi Ayodeji,
Aida S. Badiane,
Kayla Barnes
and 96 other authors
The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response
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2020
Jacob E. Lemieux ,
Katherine J. Siddle ,
Bennett M. Shaw ,
Christine Loreth ,
Stephen F. Schaffner ,
Adrianne Gladden-Young,
Gordon Adams,
Timelia Fink,
Christopher H. Tomkins-Tinch ,
Lydia A. Krasilnikova ,
Katherine C. DeRuff ,
Melissa Rudy ,
Matthew R. Bauer,
Kim A. Lagerborg ,
Erica Normandin
and 38 other authors
,
Katherine J. Siddle ,
Bennett M. Shaw ,
Christine Loreth ,
Stephen F. Schaffner ,
Adrianne Gladden-Young,
Gordon Adams,
Timelia Fink,
Christopher H. Tomkins-Tinch ,
Lydia A. Krasilnikova ,
Katherine C. DeRuff ,
Melissa Rudy ,
Matthew R. Bauer,
Kim A. Lagerborg ,
Erica Normandin
and 38 other authors
Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events
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