Researcher
Spyridon Bakas
University of Pennsylvania Perelman School of Medicine
Statistics
21 papers found
Papers authored by Spyridon Bakas
Refreshing results…
2024
Maarten van Smeden,
Bram van Ginneken,
Annika Reinke 
,
Gaël Varoquaux ,
Manuel Wiesenfarth,
Ziv R. Yaniv ,
Minu Dietlinde Tizabi ,
Michael Baumgartner ,
Matthias Eisenmann,
Doreen Heckmann-Nötzel,
A. Emre Kavur,
Ali Emre Kavur ,
Tim Rädsch ,
Carole H. Sudre,
Laura Acion
and 70 other authors
,
Gaël Varoquaux ,
Manuel Wiesenfarth,
Ziv R. Yaniv ,
Minu Dietlinde Tizabi ,
Michael Baumgartner ,
Matthias Eisenmann,
Doreen Heckmann-Nötzel,
A. Emre Kavur,
Ali Emre Kavur ,
Tim Rädsch ,
Carole H. Sudre,
Laura Acion
and 70 other authors
Understanding metric-related pitfalls in image analysis validation
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Philip Whybra,
Alex Zwanenburg ,
Vincent Andrearczyk ,
Roger Schaer ,
Aditya P. Apte ,
Alexandre Ayotte,
Bhakti Baheti ,
Spyridon Bakas ,
Andrea Bettinelli ,
Ronald Boellaard ,
Luca Boldrini,
Irène Buvat ,
Gary J. R. Cook ,
Florian Dietsche ,
Nicola Dinapoli
and 31 other authors
Download from doi.org
,
Vincent Andrearczyk ,
Roger Schaer ,
Aditya P. Apte ,
Alexandre Ayotte,
Bhakti Baheti ,
Spyridon Bakas ,
Andrea Bettinelli ,
Ronald Boellaard ,
Luca Boldrini,
Irène Buvat ,
Gary J. R. Cook ,
Florian Dietsche ,
Nicola Dinapoli
and 31 other authors
Download from doi.org
Lena Maier-Hein ,
Annika Reinke ,
Patrick Godau ,
Minu D. Tizabi,
Florian Buettner,
Evangelia Christodoulou,
Ben Glocker ,
Fabian Isensee,
Jens Kleesiek,
Michal Kozubek ,
Mauricio Reyes,
Michael A. Riegler ,
Manuel Wiesenfarth,
A. Emre Kavur,
A. Emre Kavur
and 62 other authors
,
Annika Reinke ,
Patrick Godau ,
Minu D. Tizabi,
Florian Buettner,
Evangelia Christodoulou,
Ben Glocker ,
Fabian Isensee,
Jens Kleesiek,
Michal Kozubek ,
Mauricio Reyes,
Michael A. Riegler ,
Manuel Wiesenfarth,
A. Emre Kavur,
A. Emre Kavur
and 62 other authors
Metrics reloaded: recommendations for image analysis validation
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2023
Jan Lost ,
Tej Verma ,
Leon Jekel,
Marc von Reppert ,
Niklas Tillmanns ,
Sara Merkaj ,
Gabriel Cassinelli Petersen ,
Ryan Bahar ,
Ayyüce Gordem ,
Muhammad A. Haider,
Harry Subramanian ,
Waverly Brim,
Ichiro Ikuta ,
Antonio Omuro ,
Gian Marco Conte
and 10 other authors
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,
Tej Verma ,
Leon Jekel,
Marc von Reppert ,
Niklas Tillmanns ,
Sara Merkaj ,
Gabriel Cassinelli Petersen ,
Ryan Bahar ,
Ayyüce Gordem ,
Muhammad A. Haider,
Harry Subramanian ,
Waverly Brim,
Ichiro Ikuta ,
Antonio Omuro ,
Gian Marco Conte
and 10 other authors
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Sarthak Pati ,
Ujjwal Baid ,
Brandon Edwards ,
Micah Sheller,
Shih-Han Wang,
G. Anthony Reina,
G. Anthony Reina,
Patrick Foley ,
Alexey Gruzdev,
Deepthi Karkada ,
Christos Davatzikos ,
Chiharu Sako ,
Satyam Ghodasara ,
Michel Bilello,
Suyash Mohan
and 273 other authors
,
Ujjwal Baid ,
Brandon Edwards ,
Micah Sheller,
Shih-Han Wang,
G. Anthony Reina,
G. Anthony Reina,
Patrick Foley ,
Alexey Gruzdev,
Deepthi Karkada ,
Christos Davatzikos ,
Chiharu Sako ,
Satyam Ghodasara ,
Michel Bilello,
Suyash Mohan
and 273 other authors
Author Correction: Federated learning enables big data for rare cancer boundary detection
Download from www.nature.com
2022
Evan Calabrese ,
Javier E. Villanueva-Meyer ,
Jeffrey D. Rudie ,
Andreas M. Rauschecker ,
Ujjwal Baid,
Spyridon Bakas ,
Soonmee Cha ,
John T. Mongan ,
Christopher P. Hess
,
Javier E. Villanueva-Meyer ,
Jeffrey D. Rudie ,
Andreas M. Rauschecker ,
Ujjwal Baid,
Spyridon Bakas ,
Soonmee Cha ,
John T. Mongan ,
Christopher P. Hess
The University of California San Francisco Preoperative Diffuse Glioma MRI Dataset
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Sarthak Pati ,
Ujjwal Baid ,
Brandon Edwards ,
Micah J. Sheller ,
Patrick Foley ,
G. Anthony Reina ,
Siddhesh Thakur ,
Chiharu Sako ,
Michel Bilello ,
Christos Davatzikos ,
Jason Martin,
Prashant Shah ,
Bjoern Menze ,
Spyridon Bakas
Download from iopscience.iop.org
,
Ujjwal Baid ,
Brandon Edwards ,
Micah J. Sheller ,
Patrick Foley ,
G. Anthony Reina ,
Siddhesh Thakur ,
Chiharu Sako ,
Michel Bilello ,
Christos Davatzikos ,
Jason Martin,
Prashant Shah ,
Bjoern Menze ,
Spyridon Bakas
Download from iopscience.iop.org
Spyridon Bakas ,
Chiharu Sako ,
Hamed Akbari ,
Michel Bilello ,
Aristeidis Sotiras ,
Gaurav Shukla ,
Jeffrey D. Rudie ,
Natali Flores Santamaría ,
Anahita Fathi Kazerooni ,
Sarthak Pati ,
Saima Rathore ,
Elizabeth Mamourian ,
Sung Min Ha ,
William Parker ,
Jimit Doshi
and 17 other authors
Download from doi.org
,
Chiharu Sako ,
Hamed Akbari ,
Michel Bilello ,
Aristeidis Sotiras ,
Gaurav Shukla ,
Jeffrey D. Rudie ,
Natali Flores Santamaría ,
Anahita Fathi Kazerooni ,
Sarthak Pati ,
Saima Rathore ,
Elizabeth Mamourian ,
Sung Min Ha ,
William Parker ,
Jimit Doshi
and 17 other authors
Download from doi.org
Rhea Chitalia ,
Sarthak Pati ,
Megh Bhalerao,
Siddhesh Pravin Thakur,
Nariman Jahani,
Vivian Belenky,
Elizabeth S. McDonald ,
Jessica Gibbs,
David C. Newitt,
Nola M. Hylton ,
Despina Kontos ,
Spyridon Bakas
Download from doi.org
,
Sarthak Pati ,
Megh Bhalerao,
Siddhesh Pravin Thakur,
Nariman Jahani,
Vivian Belenky,
Elizabeth S. McDonald ,
Jessica Gibbs,
David C. Newitt,
Nola M. Hylton ,
Despina Kontos ,
Spyridon Bakas
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Michela Antonelli ,
Annika Reinke ,
Spyridon Bakas ,
Keyvan Farahani,
Annette Kopp-Schneider ,
Bennett A. Landman ,
Geert Litjens ,
Bjoern Menze ,
Olaf Ronneberger,
Ronald M. Summers,
Bram van Ginneken,
Michel Bilello,
Patrick Bilic,
Patrick F. Christ,
Richard K. G. Do
and 43 other authors
,
Annika Reinke ,
Spyridon Bakas ,
Keyvan Farahani,
Annette Kopp-Schneider ,
Bennett A. Landman ,
Geert Litjens ,
Bjoern Menze ,
Olaf Ronneberger,
Ronald M. Summers,
Bram van Ginneken,
Michel Bilello,
Patrick Bilic,
Patrick F. Christ,
Richard K. G. Do
and 43 other authors
The Medical Segmentation Decathlon
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Sarthak Pati ,
Sebastian R. van der Voort ,
Ujjwal Baid ,
Brandon Edwards ,
G. Anthony Reina,
Micah Sheller,
Shih-Han Wang,
G. Anthony Reina,
Patrick Foley ,
Alexey Gruzdev,
Deepthi Karkada ,
Christos Davatzikos ,
Chiharu Sako ,
Satyam Ghodasara ,
Michel Bilello
and 271 other authors
,
Sebastian R. van der Voort ,
Ujjwal Baid ,
Brandon Edwards ,
G. Anthony Reina,
Micah Sheller,
Shih-Han Wang,
G. Anthony Reina,
Patrick Foley ,
Alexey Gruzdev,
Deepthi Karkada ,
Christos Davatzikos ,
Chiharu Sako ,
Satyam Ghodasara ,
Michel Bilello
and 271 other authors
Federated Learning Enables Big Data for Rare Cancer Boundary Detection
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2021
Florian Kofler,
Ivan Ezhov ,
Fabian Isensee ,
Fabian Balsiger ,
Christoph Berger ,
Maximilian Koerner ,
Beatrice Demiray ,
Julia Rackerseder ,
Johannes Paetzold ,
Hongwei Li ,
Suprosanna Shit ,
Richard McKinley ,
Marie Piraud ,
Spyridon Bakas ,
Claus Zimmer
and 5 other authors
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,
Fabian Isensee ,
Fabian Balsiger ,
Christoph Berger ,
Maximilian Koerner ,
Beatrice Demiray ,
Julia Rackerseder ,
Johannes Paetzold ,
Hongwei Li ,
Suprosanna Shit ,
Richard McKinley ,
Marie Piraud ,
Spyridon Bakas ,
Claus Zimmer
and 5 other authors
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2020
Sarthak Pati ,
Ruchika Verma ,
Hamed Akbari ,
Michel Bilello ,
Virginia B. Hill ,
Chiharu Sako ,
Ramon Correa ,
Niha Beig ,
Ludovic Venet ,
Siddhesh Thakur ,
Prashant Serai ,
Sung Min Ha ,
Sung Min Ha,
Geri D. Blake ,
Russell Taki Shinohara
and 2 other authors
Download from onlinelibrary.wiley.com
,
Ruchika Verma ,
Hamed Akbari ,
Michel Bilello ,
Virginia B. Hill ,
Chiharu Sako ,
Ramon Correa ,
Niha Beig ,
Ludovic Venet ,
Siddhesh Thakur ,
Prashant Serai ,
Sung Min Ha ,
Sung Min Ha,
Geri D. Blake ,
Russell Taki Shinohara
and 2 other authors
Download from onlinelibrary.wiley.com
Siddhesh Thakur,
Jimit Doshi ,
Sarthak Pati ,
Saima Rathore,
Chiharu Sako ,
Michel Bilello,
Sung Min Ha ,
Gaurav Shukla,
Adam Flanders,
Aikaterini Kotrotsou ,
Mikhail Milchenko ,
Spencer Liem,
Gregory S. Alexander,
Joseph Lombardo,
Joshua D. Palmer
and 9 other authors
Download from doi.org
,
Sarthak Pati ,
Saima Rathore,
Chiharu Sako ,
Michel Bilello,
Sung Min Ha ,
Gaurav Shukla,
Adam Flanders,
Aikaterini Kotrotsou ,
Mikhail Milchenko ,
Spencer Liem,
Gregory S. Alexander,
Joseph Lombardo,
Joshua D. Palmer
and 9 other authors
Download from doi.org
Micah J. Sheller,
Brandon Edwards,
G. Anthony Reina ,
Jason Martin,
Sarthak Pati ,
Aikaterini Kotrotsou ,
Mikhail Milchenko,
Weilin Xu,
Daniel Marcus ,
Rivka R. Colen ,
Spyridon Bakas
Download from www.nature.com
,
Jason Martin,
Sarthak Pati ,
Aikaterini Kotrotsou ,
Mikhail Milchenko,
Weilin Xu,
Daniel Marcus ,
Rivka R. Colen ,
Spyridon Bakas
Download from www.nature.com
Alex Zwanenburg ,
Martin Vallières ,
Mahmoud A. Abdalah ,
Hugo J. W. L. Aerts ,
Vincent Andrearczyk,
Aditya Apte ,
Saeed Ashrafinia,
Spyridon Bakas ,
Roelof J. Beukinga ,
Ronald Boellaard ,
Marta Bogowicz,
Luca Boldrini ,
Irène Buvat ,
Gary J. R. Cook ,
Christos Davatzikos
and 48 other authors
Download from doi.org
,
Martin Vallières ,
Mahmoud A. Abdalah ,
Hugo J. W. L. Aerts ,
Vincent Andrearczyk,
Aditya Apte ,
Saeed Ashrafinia,
Spyridon Bakas ,
Roelof J. Beukinga ,
Ronald Boellaard ,
Marta Bogowicz,
Luca Boldrini ,
Irène Buvat ,
Gary J. R. Cook ,
Christos Davatzikos
and 48 other authors
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Sarthak Pati ,
Ashish Singh,
Saima Rathore,
Aimilia Gastounioti,
Mark Bergman,
Phuc Ngo,
Sung Min Ha ,
Dimitrios Bounias,
James Minock,
Grayson Murphy,
Hongming Li,
Amit Bhattarai,
Adam Wolf,
Patmaa Sridaran,
Ratheesh Kalarot
and 10 other authors
,
Ashish Singh,
Saima Rathore,
Aimilia Gastounioti,
Mark Bergman,
Phuc Ngo,
Sung Min Ha ,
Dimitrios Bounias,
James Minock,
Grayson Murphy,
Hongming Li,
Amit Bhattarai,
Adam Wolf,
Patmaa Sridaran,
Ratheesh Kalarot
and 10 other authors
The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview
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